Small domain found in the jumonji family of transcription factors
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G248100_v2.0.a1 Prupe.4G065000_v2.0.a1 Prupe.4G160600_v2.0.a1 Prupe.4G278000_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AluBI | AGCT | 3 cut(s) | 87, 164, 220 |
| AluI | AGCT | 3 cut(s) | 87, 164, 220 |
| Ama87I | CYCGRG | 1 cut(s) | 51 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| AvaI | CYCGRG | 1 cut(s) | 51 |
| BanII | GRGCYC | 1 cut(s) | 21 |
| BbsI | GAAGAC | 1 cut(s) | 45 |
| BbvI | GCAGC | 1 cut(s) | 173 |
| BccI | CCATC | 1 cut(s) | 214 |
| BisI | GCNGC | 1 cut(s) | 162 |
| BlsI | GCNGC | 1 cut(s) | 163 |
| BmeT110I | CYCGRG | 1 cut(s) | 51 |
| BpiI | GAAGAC | 1 cut(s) | 45 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BseXI | GCAGC | 1 cut(s) | 173 |
| BsgI | GTGCAG | 1 cut(s) | 180 |
| BsiHKCI | CYCGRG | 1 cut(s) | 51 |
| BsoBI | CYCGRG | 1 cut(s) | 51 |
| Bsp1286I | GDGCHC | 1 cut(s) | 21 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspQI | GCTCTTC | 1 cut(s) | 9 |
| Bst6I | CTCTTC | 3 cut(s) | 3, 9, 54 |
| BstC8I | GCNNGC | 2 cut(s) | 28, 89 |
| BstDEI | CTNAG | 2 cut(s) | 32, 210 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 161 |
| BstV1I | GCAGC | 1 cut(s) | 173 |
| BstV2I | GAAGAC | 1 cut(s) | 45 |
| Cac8I | GCNNGC | 2 cut(s) | 28, 89 |
| CviAII | CATG | 1 cut(s) | 144 |
| CviJI | RGCY | 5 cut(s) | 19, 30, 87, 164, 220 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 30, 87, 164, 220 |
| DdeI | CTNAG | 2 cut(s) | 32, 210 |
| Eam1104I | CTCTTC | 3 cut(s) | 3, 9, 54 |
| EarI | CTCTTC | 3 cut(s) | 3, 9, 54 |
| Eco24I | GRGCYC | 1 cut(s) | 21 |
| Eco88I | CYCGRG | 1 cut(s) | 51 |
| EcoT38I | GRGCYC | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 147 |
| FaiI | YATR | 3 cut(s) | 108, 145, 191 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 38, 148, 180 |
| FatI | CATG | 1 cut(s) | 143 |
| Fnu4HI | GCNGC | 1 cut(s) | 162 |
| FriOI | GRGCYC | 1 cut(s) | 21 |
| Fsp4HI | GCNGC | 1 cut(s) | 162 |
| GluI | GCNGC | 1 cut(s) | 162 |
| Hin1II | CATG | 1 cut(s) | 147 |
| Hpy166II | GTNNAC | 1 cut(s) | 138 |
| Hpy188I | TCNGA | 1 cut(s) | 211 |
| Hpy188III | TCNNGA | 2 cut(s) | 51, 53 |
| Hpy8I | GTNNAC | 1 cut(s) | 138 |
| HpyCH4V | TGCA | 3 cut(s) | 26, 161, 202 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 161 |
| HpyF3I | CTNAG | 2 cut(s) | 32, 210 |
| Hsp92II | CATG | 1 cut(s) | 147 |
| LguI | GCTCTTC | 1 cut(s) | 9 |
| LmnI | GCTCC | 1 cut(s) | 217 |
| LpnPI | CCDG | 1 cut(s) | 104 |
| Lsp1109I | GCAGC | 1 cut(s) | 173 |
| MboII | GAAGA | 4 cut(s) | 20, 26, 50, 71 |
| MfeI | CAATTG | 1 cut(s) | 80 |
| MhlI | GDGCHC | 1 cut(s) | 21 |
| MluCI | AATT | 1 cut(s) | 80 |
| MnlI | CCTC | 3 cut(s) | 4, 205, 208 |
| MseI | TTAA | 1 cut(s) | 131 |
| MunI | CAATTG | 1 cut(s) | 80 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 161 |
| NlaIII | CATG | 1 cut(s) | 147 |
| PaeR7I | CTCGAG | 1 cut(s) | 51 |
| PciSI | GCTCTTC | 1 cut(s) | 9 |
| PkrI | GCNGC | 1 cut(s) | 163 |
| SapI | GCTCTTC | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 131 |
| SatI | GCNGC | 1 cut(s) | 162 |
| SduI | GDGCHC | 1 cut(s) | 21 |
| SetI | ASST | 3 cut(s) | 89, 166, 222 |
| Sfr274I | CTCGAG | 1 cut(s) | 51 |
| SlaI | CTCGAG | 1 cut(s) | 51 |
| SmlI | CTYRAG | 1 cut(s) | 51 |
| SmoI | CTYRAG | 1 cut(s) | 51 |
| Sse9I | AATT | 1 cut(s) | 80 |
| TaqI | TCGA | 1 cut(s) | 52 |
| TasI | AATT | 1 cut(s) | 80 |
| Tru1I | TTAA | 1 cut(s) | 131 |
| Tru9I | TTAA | 1 cut(s) | 131 |
| TseI | GCWGC | 1 cut(s) | 161 |
| TspDTI | ATGAA | 3 cut(s) | 17, 72, 132 |
| XhoI | CTCGAG | 1 cut(s) | 51 |