Prupe.4G279100_v2.0.a1

Belongs to the adaptor complexes medium subunit family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
23483759 .. 23485300
1542 bp
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UTR
Exon/CDS
Intron
Prupe.4G279100.1

Sequence Viewer

Length: 276 bp
ATGAAGGCACTGTCAAAGCTAGTCAATCTTAACAATCCTGATCTTGTCTTGTTTGTTGGAGAGGCACTTGTTGGAAATGATGTCGTTGATCAACTTTCAAAATTTGATCAGCTTCTGGATGAAATGATTGACAATGGCTTCCCTCTCACTACAGAACCTAATATTATGAGAGAGATGATTGCTCTACCAAATATAGTTAACAAGATGTTGAGTGTTGTGACAGGCAACAGTTCCAACATAAGTGACACACTTCCAGAGGTATCTTGTTATTACTAG

Protein Analysis

92

Amino Acids

10.03

Weight (kDa)

4.1

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 101
AgsI TTSAA 1 cut(s) 99
AluBI AGCT 2 cut(s) 19, 112
AluI AGCT 2 cut(s) 19, 112
AlwNI CAGNNNCTG 1 cut(s) 115
ApoI RAATTY 1 cut(s) 101
BclI TGATCA 2 cut(s) 88, 106
BfaI CTAG 2 cut(s) 20, 274
BfmI CTRYAG 1 cut(s) 150
BseGI GGATG 1 cut(s) 124
Bsp143I GATC 3 cut(s) 40, 88, 106
BssMI GATC 3 cut(s) 40, 88, 106
Bst4CI ACNGT 2 cut(s) 12, 230
BstF5I GGATG 1 cut(s) 124
BstKTI GATC 3 cut(s) 43, 91, 109
BstMBI GATC 3 cut(s) 40, 88, 106
BstSFI CTRYAG 1 cut(s) 150
BtsCI GGATG 1 cut(s) 124
BtsIMutI CAGTG 1 cut(s) 8
CaiI CAGNNNCTG 1 cut(s) 115
CviJI RGCY 3 cut(s) 19, 112, 138
CviKI_1 RGCY 3 cut(s) 19, 112, 138
DpnI GATC 3 cut(s) 42, 90, 108
DpnII GATC 3 cut(s) 40, 88, 106
FaiI YATR 3 cut(s) 167, 194, 239
FbaI TGATCA 2 cut(s) 88, 106
FokI GGATG 1 cut(s) 131
FspBI CTAG 2 cut(s) 20, 274
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HpaI GTTAAC 1 cut(s) 199
Hpy166II GTNNAC 1 cut(s) 199
Hpy188III TCNNGA 3 cut(s) 38, 116, 254
Hpy8I GTNNAC 1 cut(s) 199
HpyCH4III ACNGT 2 cut(s) 12, 230
Ksp22I TGATCA 2 cut(s) 88, 106
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 3 cut(s) 40, 88, 106
LpnPI CCDG 4 cut(s) 51, 101, 207, 267
MaeI CTAG 2 cut(s) 20, 274
MaeIII GTNAC 2 cut(s) 217, 242
MalI GATC 3 cut(s) 42, 90, 108
MboI GATC 3 cut(s) 40, 88, 106
MluCI AATT 1 cut(s) 101
MmeI TCCRAC 3 cut(s) 37, 52, 258
MnlI CCTC 3 cut(s) 55, 153, 250
MseI TTAA 2 cut(s) 30, 198
NdeII GATC 3 cut(s) 40, 88, 106
NmuCI GTSAC 2 cut(s) 217, 242
PstNI CAGNNNCTG 1 cut(s) 115
SaqAI TTAA 2 cut(s) 30, 198
Sau3AI GATC 3 cut(s) 40, 88, 106
SetI ASST 4 cut(s) 21, 114, 160, 261
SfcI CTRYAG 1 cut(s) 150
SgeI CNNG 9 cut(s) 32, 50, 56, 61, 80, 128, 214, 234, 266
Sse9I AATT 1 cut(s) 101
SspI AATATT 1 cut(s) 163
SspMI CTAG 2 cut(s) 20, 274
TaaI ACNGT 2 cut(s) 12, 230
TasI AATT 1 cut(s) 101
Tru1I TTAA 2 cut(s) 30, 198
Tru9I TTAA 2 cut(s) 30, 198
TscAI CASTG 1 cut(s) 15
TseFI GTSAC 2 cut(s) 217, 242
Tsp45I GTSAC 2 cut(s) 217, 242
TspDTI ATGAA 2 cut(s) 17, 135
TspRI CASTG 1 cut(s) 15
XapI RAATTY 1 cut(s) 101
XspI CTAG 2 cut(s) 20, 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.