Prupe.8G146800_v2.0.a1

Belongs to the adaptor complexes medium subunit family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
16211413 .. 16212837
1425 bp
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UTR
Exon/CDS
Intron
Prupe.8G146800.2

Sequence Viewer

Length: 282 bp
ATGAAGGCACTGTCAAAGCTAGTCAATCTTAACAATCCAGATCTTGTCTTGTTTGTTGGAGAGGCACTTGTTGGAAATGATGTCGTTGATCAACTTTCAAAATTTGATCAGCTTCTGGATGAAATGATTGACAATGGCTTCCCTCTCACTACAGAACCTAATATTATGAGAGAGATGATTGCTCTACCAAATATAGTTAACAAGATGTTGAGTGTTGTGACAGGCAACAGTTCCAACATAAGTGACACACTTCCAGGTGCAACATCATCTTGCATTCCATAG

Protein Analysis

94

Amino Acids

10.0

Weight (kDa)

4.14

Isoelectric Point (pI)

33.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 101
AgsI TTSAA 1 cut(s) 99
AjnI CCWGG 1 cut(s) 253
AluBI AGCT 2 cut(s) 19, 112
AluI AGCT 2 cut(s) 19, 112
AlwNI CAGNNNCTG 1 cut(s) 115
ApoI RAATTY 1 cut(s) 101
BciT130I CCWGG 1 cut(s) 255
BclI TGATCA 2 cut(s) 88, 106
BfaI CTAG 1 cut(s) 20
BfmI CTRYAG 1 cut(s) 150
BglII AGATCT 1 cut(s) 40
Bme1390I CCNGG 1 cut(s) 255
BmrFI CCNGG 1 cut(s) 255
BseBI CCWGG 1 cut(s) 255
BseGI GGATG 1 cut(s) 124
BsmI GAATGC 1 cut(s) 273
Bsp143I GATC 3 cut(s) 40, 88, 106
BssMI GATC 3 cut(s) 40, 88, 106
Bst2UI CCWGG 1 cut(s) 255
Bst4CI ACNGT 2 cut(s) 12, 230
BstF5I GGATG 1 cut(s) 124
BstKTI GATC 3 cut(s) 43, 91, 109
BstMBI GATC 3 cut(s) 40, 88, 106
BstNI CCWGG 1 cut(s) 255
BstSCI CCNGG 1 cut(s) 253
BstSFI CTRYAG 1 cut(s) 150
BstX2I RGATCY 1 cut(s) 40
BstYI RGATCY 1 cut(s) 40
BtsCI GGATG 1 cut(s) 124
BtsIMutI CAGTG 1 cut(s) 8
CaiI CAGNNNCTG 1 cut(s) 115
CviJI RGCY 3 cut(s) 19, 112, 138
CviKI_1 RGCY 3 cut(s) 19, 112, 138
DpnI GATC 3 cut(s) 42, 90, 108
DpnII GATC 3 cut(s) 40, 88, 106
EcoRII CCWGG 1 cut(s) 253
FaiI YATR 4 cut(s) 167, 194, 239, 280
FbaI TGATCA 2 cut(s) 88, 106
FokI GGATG 1 cut(s) 131
FspBI CTAG 1 cut(s) 20
HincII GTYRAC 1 cut(s) 199
HindII GTYRAC 1 cut(s) 199
HpaI GTTAAC 1 cut(s) 199
Hpy166II GTNNAC 1 cut(s) 199
Hpy188III TCNNGA 2 cut(s) 38, 116
Hpy8I GTNNAC 1 cut(s) 199
HpyCH4III ACNGT 2 cut(s) 12, 230
HpyCH4V TGCA 2 cut(s) 260, 273
Ksp22I TGATCA 2 cut(s) 88, 106
KspAI GTTAAC 1 cut(s) 199
Kzo9I GATC 3 cut(s) 40, 88, 106
LpnPI CCDG 5 cut(s) 51, 101, 207, 240, 267
MaeI CTAG 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 217, 242
MalI GATC 3 cut(s) 42, 90, 108
MboI GATC 3 cut(s) 40, 88, 106
MflI RGATCY 1 cut(s) 40
MluCI AATT 1 cut(s) 101
MmeI TCCRAC 3 cut(s) 37, 52, 258
MnlI CCTC 2 cut(s) 55, 153
MseI TTAA 2 cut(s) 30, 198
MspR9I CCNGG 1 cut(s) 255
Mva1269I GAATGC 1 cut(s) 273
MvaI CCWGG 1 cut(s) 255
NdeII GATC 3 cut(s) 40, 88, 106
NmuCI GTSAC 2 cut(s) 217, 242
PctI GAATGC 1 cut(s) 273
Psp6I CCWGG 1 cut(s) 253
PspGI CCWGG 1 cut(s) 253
PstNI CAGNNNCTG 1 cut(s) 115
PsuI RGATCY 1 cut(s) 40
SaqAI TTAA 2 cut(s) 30, 198
Sau3AI GATC 3 cut(s) 40, 88, 106
ScrFI CCNGG 1 cut(s) 255
SetI ASST 4 cut(s) 21, 114, 160, 259
SfcI CTRYAG 1 cut(s) 150
Sse9I AATT 1 cut(s) 101
SspI AATATT 1 cut(s) 163
SspMI CTAG 1 cut(s) 20
StyD4I CCNGG 1 cut(s) 253
TaaI ACNGT 2 cut(s) 12, 230
TasI AATT 1 cut(s) 101
Tru1I TTAA 2 cut(s) 30, 198
Tru9I TTAA 2 cut(s) 30, 198
TscAI CASTG 1 cut(s) 15
TseFI GTSAC 2 cut(s) 217, 242
Tsp45I GTSAC 2 cut(s) 217, 242
TspDTI ATGAA 2 cut(s) 17, 135
TspRI CASTG 1 cut(s) 15
XapI RAATTY 1 cut(s) 101
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.