nuclear protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62760 AT5G62760 AT5G62760 AT5G62760 AT5G62760 AT5G62760 |
| fragaria_vesca | FvH4_5g15410 FvH4_5g15410 FvH4_5g15410 FvH4_5g15410 |
| malus_domestica | MD06G1188800.v1.1 MD14G1195600.v1.1 |
| prunus_persica | Prupe.5G187100_v2.0.a1 Prupe.5G187100_v2.0.a1 Prupe.5G187100_v2.0.a1 |
| pyrus_communis | pycom06g16760 pycom14g16220 |
| rosa_chinensis | RchiOBHm_Chr7g0180671 |
| rosa_laevigata | RLG00000005244 |
| rosa_multiflora | Rmu_sc0023372.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00272690 |
| rosa_rugosa | Rorug06G0434700 |
| rosa_samantha | Rh7AG036200 Rh7BG036100 Rh7CG037700 Rh7DG036300 |
| rosa_wichuraiana | Rw7G002990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1269 |
| Acc16I | TGCGCA | 1 cut(s) | 1708 |
| Acc36I | ACCTGC | 1 cut(s) | 887 |
| AccB1I | GGYRCC | 1 cut(s) | 307 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1313 |
| AccII | CGCG | 2 cut(s) | 1270, 1344 |
| AclWI | GGATC | 2 cut(s) | 1688, 1701 |
| AcoI | YGGCCR | 1 cut(s) | 1755 |
| AcsI | RAATTY | 3 cut(s) | 284, 490, 1380 |
| AcyI | GRCGYC | 2 cut(s) | 25, 308 |
| AfaI | GTAC | 3 cut(s) | 190, 350, 511 |
| AflIII | ACRYGT | 1 cut(s) | 1268 |
| AjnI | CCWGG | 4 cut(s) | 874, 1071, 1306, 2160 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 31, 63, 1796, 1828 |
| Alw21I | GWGCWC | 2 cut(s) | 760, 1725 |
| Alw44I | GTGCAC | 2 cut(s) | 756, 1721 |
| AlwI | GGATC | 2 cut(s) | 1688, 1701 |
| AoxI | GGCC | 4 cut(s) | 239, 380, 695, 1755 |
| ApaLI | GTGCAC | 2 cut(s) | 756, 1721 |
| ApeKI | GCWGC | 9 cut(s) | 911, 931, 1078, 1252, 1704, 1709, 2189, 2192, 2383 |
| ApoI | RAATTY | 3 cut(s) | 284, 490, 1380 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2198, 2230 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1384, 2321 |
| AspLEI | GCGC | 4 cut(s) | 310, 1078, 1344, 1709 |
| AspS9I | GGNCC | 4 cut(s) | 4, 179, 973, 2228 |
| AsuC2I | CCSGG | 3 cut(s) | 159, 2232, 2282 |
| AsuHPI | GGTGA | 8 cut(s) | 368, 374, 499, 1436, 1501, 1573, 2233, 2312 |
| AsuII | TTCGAA | 1 cut(s) | 2325 |
| AvaII | GGWCC | 4 cut(s) | 4, 179, 973, 2228 |
| BaeGI | GKGCMC | 2 cut(s) | 760, 1725 |
| BamHI | GGATCC | 1 cut(s) | 1693 |
| BanI | GGYRCC | 1 cut(s) | 307 |
| BanII | GRGCYC | 1 cut(s) | 200 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1656, 1688 |
| BbsI | GAAGAC | 5 cut(s) | 984, 1565, 1875, 2001, 2334 |
| Bbv12I | GWGCWC | 2 cut(s) | 760, 1725 |
| BbvI | GCAGC | 9 cut(s) | 898, 943, 1090, 1264, 1691, 1721, 2201, 2204, 2395 |
| BccI | CCATC | 8 cut(s) | 293, 353, 988, 1158, 1486, 1747, 1786, 2007 |
| BceAI | ACGGC | 3 cut(s) | 226, 496, 1741 |
| BciT130I | CCWGG | 4 cut(s) | 876, 1073, 1308, 2162 |
| BciVI | GTATCC | 2 cut(s) | 1855, 2234 |
| BclI | TGATCA | 2 cut(s) | 475, 1276 |
| BcnI | CCSGG | 3 cut(s) | 159, 2232, 2282 |
| BfaI | CTAG | 8 cut(s) | 30, 573, 582, 693, 1349, 1676, 1713, 2024 |
| BfoI | RGCGCY | 1 cut(s) | 311 |
| BfuAI | ACCTGC | 1 cut(s) | 887 |
| BfuI | GTATCC | 2 cut(s) | 1855, 2234 |
| Bme1390I | CCNGG | 7 cut(s) | 159, 876, 1073, 1308, 2162, 2232, 2282 |
| Bme18I | GGWCC | 4 cut(s) | 4, 179, 973, 2228 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 179, 973, 2228 |
| BmiI | GGNNCC | 5 cut(s) | 6, 181, 309, 975, 1695 |
| BmrFI | CCNGG | 7 cut(s) | 159, 876, 1073, 1308, 2162, 2232, 2282 |
| BmrI | ACTGGG | 1 cut(s) | 756 |
| BmsI | GCATC | 6 cut(s) | 1023, 1222, 1691, 1789, 1936, 1975 |
| BmuI | ACTGGG | 1 cut(s) | 756 |
| BpiI | GAAGAC | 5 cut(s) | 984, 1565, 1875, 2001, 2334 |
| BpmI | CTGGAG | 1 cut(s) | 2173 |
| Bpu14I | TTCGAA | 1 cut(s) | 2325 |
| BpuEI | CTTGAG | 1 cut(s) | 1586 |
| BpuMI | CCSGG | 3 cut(s) | 159, 2232, 2282 |
| BsaHI | GRCGYC | 2 cut(s) | 25, 308 |
| BsaJI | CCNNGG | 9 cut(s) | 183, 236, 242, 874, 1071, 1128, 1193, 1816, 1965 |
| BsaWI | WCCGGW | 1 cut(s) | 500 |
| Bse1I | ACTGG | 2 cut(s) | 751, 1123 |
| Bse3DI | GCAATG | 1 cut(s) | 349 |
| BseBI | CCWGG | 4 cut(s) | 876, 1073, 1308, 2162 |
| BseDI | CCNNGG | 9 cut(s) | 183, 236, 242, 874, 1071, 1128, 1193, 1816, 1965 |
| BseGI | GGATG | 9 cut(s) | 97, 454, 1183, 1399, 1603, 1778, 1804, 1990, 1999 |
| BseMI | GCAATG | 1 cut(s) | 349 |
| BseMII | CTCAG | 3 cut(s) | 206, 1643, 1905 |
| BseNI | ACTGG | 2 cut(s) | 751, 1123 |
| BseRI | GAGGAG | 4 cut(s) | 927, 951, 1535, 1583 |
| BseSI | GKGCMC | 2 cut(s) | 760, 1725 |
| BseXI | GCAGC | 9 cut(s) | 898, 943, 1090, 1264, 1691, 1721, 2201, 2204, 2395 |
| Bsh1236I | CGCG | 2 cut(s) | 1270, 1344 |
| BshFI | GGCC | 4 cut(s) | 241, 382, 697, 1757 |
| BshNI | GGYRCC | 1 cut(s) | 307 |
| BsiHKAI | GWGCWC | 2 cut(s) | 760, 1725 |
| BsiSI | CCGG | 6 cut(s) | 158, 443, 501, 1758, 2231, 2282 |
| BslFI | GGGAC | 2 cut(s) | 763, 1194 |
| BsmFI | GGGAC | 2 cut(s) | 763, 1194 |
| BsmI | GAATGC | 2 cut(s) | 807, 811 |
| BsnI | GGCC | 4 cut(s) | 241, 382, 697, 1757 |
| Bsp119I | TTCGAA | 1 cut(s) | 2325 |
| Bsp1286I | GDGCHC | 3 cut(s) | 200, 760, 1725 |
| Bsp143I | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| Bsp19I | CCATGG | 2 cut(s) | 1128, 1816 |
| BspANI | GGCC | 4 cut(s) | 241, 382, 697, 1757 |
| BspCNI | CTCAG | 3 cut(s) | 205, 1642, 1906 |
| BspFNI | CGCG | 2 cut(s) | 1270, 1344 |
| BspHI | TCATGA | 1 cut(s) | 1057 |
| BspLI | GGNNCC | 5 cut(s) | 6, 181, 309, 975, 1695 |
| BspMI | ACCTGC | 1 cut(s) | 887 |
| BspPI | GGATC | 2 cut(s) | 1688, 1701 |
| BspQI | GCTCTTC | 2 cut(s) | 1966, 1970 |
| BspT104I | TTCGAA | 1 cut(s) | 2325 |
| BspT107I | GGYRCC | 1 cut(s) | 307 |
| BsrDI | GCAATG | 1 cut(s) | 349 |
| BsrI | ACTGG | 2 cut(s) | 751, 1123 |
| BssECI | CCNNGG | 9 cut(s) | 183, 236, 242, 874, 1071, 1128, 1193, 1816, 1965 |
| BssMI | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| BssNI | GRCGYC | 2 cut(s) | 25, 308 |
| BssT1I | CCWWGG | 3 cut(s) | 1128, 1816, 1965 |
| Bst2UI | CCWGG | 4 cut(s) | 876, 1073, 1308, 2162 |
| Bst4CI | ACNGT | 3 cut(s) | 514, 675, 2008 |
| Bst6I | CTCTTC | 5 cut(s) | 612, 945, 1966, 1970, 2268 |
| BstACI | GRCGYC | 2 cut(s) | 25, 308 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1934 |
| BstBI | TTCGAA | 1 cut(s) | 2325 |
| BstC8I | GCNNGC | 3 cut(s) | 738, 909, 1702 |
| BstDEI | CTNAG | 4 cut(s) | 192, 1327, 1629, 1914 |
| BstDSI | CCRYGG | 5 cut(s) | 183, 242, 1128, 1193, 1816 |
| BstEII | GGTNACC | 2 cut(s) | 209, 2284 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1568 |
| BstF5I | GGATG | 9 cut(s) | 97, 454, 1183, 1399, 1603, 1778, 1804, 1990, 1999 |
| BstFNI | CGCG | 2 cut(s) | 1270, 1344 |
| BstH2I | RGCGCY | 1 cut(s) | 311 |
| BstHHI | GCGC | 4 cut(s) | 310, 1078, 1344, 1709 |
| BstKTI | GATC | 4 cut(s) | 478, 1279, 1696, 1923 |
| BstMBI | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 63, 1625, 1706, 1934, 2201 |
| BstNI | CCWGG | 4 cut(s) | 876, 1073, 1308, 2162 |
| BstNSI | RCATGY | 1 cut(s) | 1112 |
| BstPI | GGTNACC | 2 cut(s) | 209, 2284 |
| BstSCI | CCNGG | 7 cut(s) | 157, 874, 1071, 1306, 2160, 2230, 2280 |
| BstSLI | GKGCMC | 2 cut(s) | 760, 1725 |
| BstUI | CGCG | 2 cut(s) | 1270, 1344 |
| BstV1I | GCAGC | 9 cut(s) | 898, 943, 1090, 1264, 1691, 1721, 2201, 2204, 2395 |
| BstV2I | GAAGAC | 5 cut(s) | 984, 1565, 1875, 2001, 2334 |
| BstX2I | RGATCY | 1 cut(s) | 1693 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2297 |
| BstYI | RGATCY | 1 cut(s) | 1693 |
| BsuI | GTATCC | 2 cut(s) | 1855, 2234 |
| BsuRI | GGCC | 4 cut(s) | 241, 382, 697, 1757 |
| BtgI | CCRYGG | 5 cut(s) | 183, 242, 1128, 1193, 1816 |
| BtgZI | GCGATG | 1 cut(s) | 1449 |
| BtsCI | GGATG | 9 cut(s) | 97, 454, 1183, 1399, 1603, 1778, 1804, 1990, 1999 |
| BtsI | GCAGTG | 1 cut(s) | 2302 |
| BtsIMutI | CAGTG | 2 cut(s) | 931, 2302 |
| BveI | ACCTGC | 1 cut(s) | 887 |
| Cac8I | GCNNGC | 3 cut(s) | 738, 909, 1702 |
| CciI | TCATGA | 1 cut(s) | 1057 |
| CfoI | GCGC | 4 cut(s) | 310, 1078, 1344, 1709 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 179, 973, 2228 |
| CseI | GACGC | 3 cut(s) | 14, 1259, 1880 |
| CsiI | ACCWGGT | 1 cut(s) | 2160 |
| Csp6I | GTAC | 3 cut(s) | 189, 349, 510 |
| CviQI | GTAC | 3 cut(s) | 189, 349, 510 |
| DdeI | CTNAG | 4 cut(s) | 192, 1327, 1629, 1914 |
| DinI | GGCGCC | 1 cut(s) | 309 |
| DpnI | GATC | 4 cut(s) | 477, 1278, 1695, 1922 |
| DpnII | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| DraI | TTTAAA | 1 cut(s) | 405 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1269 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1269 |
| EaeI | YGGCCR | 1 cut(s) | 1755 |
| Eam1104I | CTCTTC | 5 cut(s) | 612, 945, 1966, 1970, 2268 |
| EarI | CTCTTC | 5 cut(s) | 612, 945, 1966, 1970, 2268 |
| Eco130I | CCWWGG | 3 cut(s) | 1128, 1816, 1965 |
| Eco147I | AGGCCT | 1 cut(s) | 697 |
| Eco24I | GRGCYC | 1 cut(s) | 200 |
| Eco47I | GGWCC | 4 cut(s) | 4, 179, 973, 2228 |
| Eco91I | GGTNACC | 2 cut(s) | 209, 2284 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1568 |
| EcoO109I | RGGNCCY | 1 cut(s) | 179 |
| EcoO65I | GGTNACC | 2 cut(s) | 209, 2284 |
| EcoRI | GAATTC | 2 cut(s) | 490, 1380 |
| EcoRII | CCWGG | 4 cut(s) | 874, 1071, 1306, 2160 |
| EcoT14I | CCWWGG | 3 cut(s) | 1128, 1816, 1965 |
| EcoT38I | GRGCYC | 1 cut(s) | 200 |
| EgeI | GGCGCC | 1 cut(s) | 309 |
| EheI | GGCGCC | 1 cut(s) | 309 |
| ErhI | CCWWGG | 3 cut(s) | 1128, 1816, 1965 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1310, 1342, 2078, 2110, 2319, 2351 |
| FaqI | GGGAC | 2 cut(s) | 763, 1194 |
| FauI | CCCGC | 4 cut(s) | 476, 984, 1605, 1693 |
| FauNDI | CATATG | 2 cut(s) | 328, 903 |
| FbaI | TGATCA | 2 cut(s) | 475, 1276 |
| FokI | GGATG | 9 cut(s) | 84, 461, 1170, 1406, 1610, 1765, 1811, 1986, 1997 |
| FriOI | GRGCYC | 1 cut(s) | 200 |
| FspBI | CTAG | 8 cut(s) | 30, 573, 582, 693, 1349, 1676, 1713, 2024 |
| FspI | TGCGCA | 1 cut(s) | 1708 |
| GlaI | GCGC | 4 cut(s) | 309, 1077, 1343, 1708 |
| GsuI | CTGGAG | 1 cut(s) | 2173 |
| HaeII | RGCGCY | 1 cut(s) | 311 |
| HaeIII | GGCC | 4 cut(s) | 241, 382, 697, 1757 |
| HapII | CCGG | 6 cut(s) | 158, 443, 501, 1758, 2231, 2282 |
| HgaI | GACGC | 3 cut(s) | 14, 1259, 1880 |
| HhaI | GCGC | 4 cut(s) | 310, 1078, 1344, 1709 |
| Hin1I | GRCGYC | 2 cut(s) | 25, 308 |
| Hin6I | GCGC | 4 cut(s) | 308, 1076, 1342, 1707 |
| HinP1I | GCGC | 4 cut(s) | 308, 1076, 1342, 1707 |
| HindIII | AAGCTT | 1 cut(s) | 2121 |
| HpaII | CCGG | 6 cut(s) | 158, 443, 501, 1758, 2231, 2282 |
| HphI | GGTGA | 8 cut(s) | 368, 374, 499, 1436, 1501, 1573, 2233, 2312 |
| Hpy166II | GTNNAC | 5 cut(s) | 578, 758, 1723, 1855, 2396 |
| Hpy188I | TCNGA | 5 cut(s) | 195, 237, 519, 634, 2044 |
| Hpy188III | TCNNGA | 8 cut(s) | 473, 1058, 1274, 1656, 1847, 1901, 2109, 2238 |
| Hpy8I | GTNNAC | 5 cut(s) | 578, 758, 1723, 1855, 2396 |
| HpyCH4III | ACNGT | 3 cut(s) | 514, 675, 2008 |
| HpyCH4IV | ACGT | 2 cut(s) | 2319, 2347 |
| HpyCH4V | TGCA | 6 cut(s) | 758, 805, 896, 1646, 1723, 1792 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 63, 1625, 1706, 1934, 2201 |
| HpyF3I | CTNAG | 4 cut(s) | 192, 1327, 1629, 1914 |
| HpySE526I | ACGT | 2 cut(s) | 2319, 2347 |
| Hsp92I | GRCGYC | 2 cut(s) | 25, 308 |
| HspAI | GCGC | 4 cut(s) | 308, 1076, 1342, 1707 |
| KasI | GGCGCC | 1 cut(s) | 307 |
| Ksp22I | TGATCA | 2 cut(s) | 475, 1276 |
| Kzo9I | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| LguI | GCTCTTC | 2 cut(s) | 1966, 1970 |
| LmnI | GCTCC | 2 cut(s) | 1378, 1780 |
| Lsp1109I | GCAGC | 9 cut(s) | 898, 943, 1090, 1264, 1691, 1721, 2201, 2204, 2395 |
| LweI | GCATC | 6 cut(s) | 1023, 1222, 1691, 1789, 1936, 1975 |
| MabI | ACCWGGT | 1 cut(s) | 2160 |
| MaeI | CTAG | 8 cut(s) | 30, 573, 582, 693, 1349, 1676, 1713, 2024 |
| MaeII | ACGT | 2 cut(s) | 2319, 2347 |
| MaeIII | GTNAC | 6 cut(s) | 140, 209, 1838, 2090, 2156, 2284 |
| MalI | GATC | 4 cut(s) | 477, 1278, 1695, 1922 |
| MboI | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| MfeI | CAATTG | 2 cut(s) | 1641, 1793 |
| MflI | RGATCY | 1 cut(s) | 1693 |
| MhlI | GDGCHC | 3 cut(s) | 200, 760, 1725 |
| MluI | ACGCGT | 1 cut(s) | 1268 |
| Mly113I | GGCGCC | 1 cut(s) | 308 |
| MlyI | GAGTC | 4 cut(s) | 396, 442, 829, 1257 |
| MmeI | TCCRAC | 1 cut(s) | 2027 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1384, 2321 |
| MseI | TTAA | 7 cut(s) | 375, 404, 417, 588, 1248, 1554, 2097 |
| MslI | CAYNNNNRTG | 4 cut(s) | 828, 1592, 1821, 2295 |
| MspA1I | CMGCKG | 2 cut(s) | 911, 2386 |
| MspI | CCGG | 6 cut(s) | 158, 443, 501, 1758, 2231, 2282 |
| MspR9I | CCNGG | 7 cut(s) | 159, 876, 1073, 1308, 2162, 2232, 2282 |
| MunI | CAATTG | 2 cut(s) | 1641, 1793 |
| Mva1269I | GAATGC | 2 cut(s) | 807, 811 |
| MvaI | CCWGG | 4 cut(s) | 876, 1073, 1308, 2162 |
| MvnI | CGCG | 2 cut(s) | 1270, 1344 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 63, 1625, 1706, 1934, 2201 |
| NarI | GGCGCC | 1 cut(s) | 308 |
| NciI | CCSGG | 3 cut(s) | 159, 2232, 2282 |
| NcoI | CCATGG | 2 cut(s) | 1128, 1816 |
| NdeI | CATATG | 2 cut(s) | 328, 903 |
| NdeII | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| NlaIV | GGNNCC | 5 cut(s) | 6, 181, 309, 975, 1695 |
| NmeAIII | GCCGAG | 1 cut(s) | 408 |
| NmuCI | GTSAC | 3 cut(s) | 140, 1838, 2156 |
| NsbI | TGCGCA | 1 cut(s) | 1708 |
| NspI | RCATGY | 1 cut(s) | 1112 |
| NspV | TTCGAA | 1 cut(s) | 2325 |
| PagI | TCATGA | 1 cut(s) | 1057 |
| PceI | AGGCCT | 1 cut(s) | 697 |
| PciSI | GCTCTTC | 2 cut(s) | 1966, 1970 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2344 |
| PctI | GAATGC | 2 cut(s) | 807, 811 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1384, 2321 |
| PfeI | GAWTC | 7 cut(s) | 47, 134, 569, 689, 1136, 2303, 2351 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1313 |
| PleI | GAGTC | 4 cut(s) | 395, 441, 828, 1257 |
| PluTI | GGCGCC | 1 cut(s) | 311 |
| PpsI | GAGTC | 4 cut(s) | 395, 441, 828, 1257 |
| PpuMI | RGGWCCY | 1 cut(s) | 179 |
| Psp5II | RGGWCCY | 1 cut(s) | 179 |
| Psp6I | CCWGG | 4 cut(s) | 874, 1071, 1306, 2160 |
| PspEI | GGTNACC | 2 cut(s) | 209, 2284 |
| PspGI | CCWGG | 4 cut(s) | 874, 1071, 1306, 2160 |
| PspN4I | GGNNCC | 5 cut(s) | 6, 181, 309, 975, 1695 |
| PspPI | GGNCC | 4 cut(s) | 4, 179, 973, 2228 |
| PspPPI | RGGWCCY | 1 cut(s) | 179 |
| PsuI | RGATCY | 1 cut(s) | 1693 |
| PvuII | CAGCTG | 1 cut(s) | 911 |
| RsaI | GTAC | 3 cut(s) | 190, 350, 511 |
| RsaNI | GTAC | 3 cut(s) | 189, 349, 510 |
| RseI | CAYNNNNRTG | 4 cut(s) | 828, 1592, 1821, 2295 |
| SapI | GCTCTTC | 2 cut(s) | 1966, 1970 |
| SaqAI | TTAA | 7 cut(s) | 375, 404, 417, 588, 1248, 1554, 2097 |
| Sau3AI | GATC | 4 cut(s) | 475, 1276, 1693, 1920 |
| Sau96I | GGNCC | 4 cut(s) | 4, 179, 973, 2228 |
| SchI | GAGTC | 4 cut(s) | 396, 442, 829, 1257 |
| ScrFI | CCNGG | 7 cut(s) | 159, 876, 1073, 1308, 2162, 2232, 2282 |
| SduI | GDGCHC | 3 cut(s) | 200, 760, 1725 |
| SexAI | ACCWGGT | 1 cut(s) | 2160 |
| SfaNI | GCATC | 6 cut(s) | 1023, 1222, 1691, 1789, 1936, 1975 |
| SfoI | GGCGCC | 1 cut(s) | 309 |
| SfuI | TTCGAA | 1 cut(s) | 2325 |
| SinI | GGWCC | 4 cut(s) | 4, 179, 973, 2228 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 828, 1592, 1821, 2295 |
| SmlI | CTYRAG | 1 cut(s) | 1565 |
| SmoI | CTYRAG | 1 cut(s) | 1565 |
| SseBI | AGGCCT | 1 cut(s) | 697 |
| SspDI | GGCGCC | 1 cut(s) | 307 |
| SspI | AATATT | 2 cut(s) | 716, 2049 |
| SspMI | CTAG | 8 cut(s) | 30, 573, 582, 693, 1349, 1676, 1713, 2024 |
| StuI | AGGCCT | 1 cut(s) | 697 |
| StyD4I | CCNGG | 7 cut(s) | 157, 874, 1071, 1306, 2160, 2230, 2280 |
| StyI | CCWWGG | 3 cut(s) | 1128, 1816, 1965 |
| TaaI | ACNGT | 3 cut(s) | 514, 675, 2008 |
| TaiI | ACGT | 2 cut(s) | 2322, 2350 |
| TaqI | TCGA | 4 cut(s) | 132, 390, 2325, 2338 |
| TaqII | GACCGA | 1 cut(s) | 906 |
| TauI | GCSGC | 2 cut(s) | 342, 2383 |
| TfiI | GAWTC | 7 cut(s) | 47, 134, 569, 689, 1136, 2303, 2351 |
| Tru1I | TTAA | 7 cut(s) | 375, 404, 417, 588, 1248, 1554, 2097 |
| Tru9I | TTAA | 7 cut(s) | 375, 404, 417, 588, 1248, 1554, 2097 |
| TscAI | CASTG | 2 cut(s) | 931, 2302 |
| TseFI | GTSAC | 3 cut(s) | 140, 1838, 2156 |
| TseI | GCWGC | 9 cut(s) | 911, 931, 1078, 1252, 1704, 1709, 2189, 2192, 2383 |
| Tsp45I | GTSAC | 3 cut(s) | 140, 1838, 2156 |
| TspGWI | ACGGA | 2 cut(s) | 279, 1210 |
| TspRI | CASTG | 2 cut(s) | 931, 2302 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1313 |
| VneI | GTGCAC | 2 cut(s) | 756, 1721 |
| VpaK11BI | GGWCC | 4 cut(s) | 4, 179, 973, 2228 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1568 |
| XapI | RAATTY | 3 cut(s) | 284, 490, 1380 |
| XceI | RCATGY | 1 cut(s) | 1112 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1384, 2321 |
| XspI | CTAG | 8 cut(s) | 30, 573, 582, 693, 1349, 1676, 1713, 2024 |