Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0022006

Physical Location & Seq

Genomic Coordinates Reverse (-)

16648949 .. 16650738

Gene Structure 1790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G209200.1_v2.0.a1.CDS.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 909 bp

ATGGGGTGGGCAATAGCACTCCACGGCGGTGCAGGGGACATCCCGCTCTCCCTACCGCCCTCGAGCTCTCAAAGCCAACACCCCGCTTTGGACGTCGTTGAGCTTGTGGTTCGTGAGTTAGAGAACATTCCACACTTTAATGCTGGTAAAGGGTCTGTCTTGACCACCCAAGGCACAGTTGAAATGGAAGCTTGCATCATAGATGGAACCAAGAGATGTGGAGCTGTTTCTGGGCTCACCACTGTTGTCAATCCCATATCTTTAGCAAGACTGGTCATGGAGAAAACTCCTCACATTTATCTTGCATTTGATGGAGCAGAGGCCTTTGCAAGGGAACAAGGTGTTGAGACTGTAGATTCAAGTCATTTCATTACCCCAGAGAATGTTGAGAGGCTCAAGCAGGCAAAAGAAGCCAACAGAGTGCAGATTGATTATACACAACCCCTTCACAAAGATGAGAAGAAAGAAACACCAGAAGCTGATGGGGATAGTAAACTTGGGACGGTTGGATGCGTGGCTGTCGATAGTCTCGGGAATTTAGCTTCTGCAACTTCTACTGGCGGATTAGTCAACAAGATGGTTGGTCGGATTGGGGACACACCCATCATTGGTGCAGGGACATATGCCAACAGTCTCTGTGCAGTTTCTGCCACGGGCAAAGGTGAAGCGATAATCCGTGGTACGGTTGCAAGGGATGTAGCAGCTGTTATGGAGTTCAAATATGTTTCTCTCAAAGAAGCTGCAGCTTATGTTGTGGAGGAGGGCACTCCAAAAGGCAATGTAGGTTTGGTTGCTGTATCTGCCACAGGGGAAGTGACAATGCCTTTCAATACCAATGGCATGTTTCGAGCTTGCGCTACTGAGGATGGGTATTCAGAGATTGGAATATGGCCTTCTGTGCAAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0003674 GO:0003824 GO:0004067 GO:0004175 GO:0004190 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009627 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009814 GO:0010033 GO:0010035 GO:0012505 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0033993 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0051704 GO:0051707 GO:0070001 GO:0070011 GO:0071704 GO:0097305 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Asparaginase_2

Protein Analysis

303

Amino Acids

31.62

Weight (kDa)

4.99

Isoelectric Point (pI)

25.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0022006)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08100
prunus_persica	Prupe.5G209200_v2.0.a1 Prupe.5G209200_v2.0.a1
rosa_samantha	Rh7AG060100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	96
AccBSI	CCGCTC	1 cut(s)	46
AciI	CCGC	5 cut(s)	27, 44, 56, 84, 561
AcsI	RAATTY	1 cut(s)	535
AcyI	GRCGYC	1 cut(s)	93
AfaI	GTAC	1 cut(s)	682
AfiI	CCNNNNNNNGG	4 cut(s)	88, 330, 608, 682
AgsI	TTSAA	4 cut(s)	182, 360, 718, 829
AleI	CACNNNNGTG	1 cut(s)	27
Alw21I	GWGCWC	1 cut(s)	68
Alw26I	GTCTC	3 cut(s)	341, 533, 638
AlwNI	CAGNNNCTG	3 cut(s)	479, 636, 647
Ama87I	CYCGRG	2 cut(s)	61, 530
AoxI	GGCC	2 cut(s)	321, 890
ApeKI	GCWGC	3 cut(s)	701, 740, 743
ApoI	RAATTY	1 cut(s)	535
AspLEI	GCGC	1 cut(s)	857
AsuHPI	GGTGA	2 cut(s)	229, 674
AvaI	CYCGRG	2 cut(s)	61, 530
BaeGI	GKGCMC	1 cut(s)	767
BanII	GRGCYC	2 cut(s)	68, 237
Bbv12I	GWGCWC	1 cut(s)	68
BbvI	GCAGC	3 cut(s)	713, 727, 755
BccI	CCATC	6 cut(s)	197, 305, 476, 571, 611, 860
BceAI	ACGGC	1 cut(s)	40
BcoDI	GTCTC	3 cut(s)	341, 533, 638
BfmI	CTRYAG	2 cut(s)	351, 741
BisI	GCNGC	3 cut(s)	702, 741, 744
BlsI	GCNGC	3 cut(s)	703, 742, 745
BmeT110I	CYCGRG	2 cut(s)	61, 530
BmiI	GGNNCC	1 cut(s)	208
BmsI	GCATC	2 cut(s)	204, 500
BpuEI	CTTGAG	1 cut(s)	380
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	4 cut(s)	22, 169, 651, 676
Bsc4I	CCNNNNNNNGG	4 cut(s)	88, 330, 608, 682
Bse1I	ACTGG	2 cut(s)	276, 562
Bse3DI	GCAATG	1 cut(s)	784
BseDI	CCNNGG	4 cut(s)	22, 169, 651, 676
BseGI	GGATG	4 cut(s)	39, 515, 700, 871
BseLI	CCNNNNNNNGG	4 cut(s)	88, 330, 608, 682
BseMI	GCAATG	1 cut(s)	784
BseMII	CTCAG	1 cut(s)	852
BseNI	ACTGG	2 cut(s)	276, 562
BseRI	GAGGAG	2 cut(s)	279, 773
BseSI	GKGCMC	1 cut(s)	767
BseXI	GCAGC	3 cut(s)	713, 727, 755
BsgI	GTGCAG	4 cut(s)	51, 443, 633, 660
BshFI	GGCC	2 cut(s)	323, 892
BsiHKAI	GWGCWC	1 cut(s)	68
BsiHKCI	CYCGRG	2 cut(s)	61, 530
BslFI	GGGAC	4 cut(s)	50, 514, 608, 631
BslI	CCNNNNNNNGG	4 cut(s)	88, 330, 608, 682
BsmAI	GTCTC	3 cut(s)	341, 533, 638
BsmFI	GGGAC	4 cut(s)	50, 514, 608, 631
BsnI	GGCC	2 cut(s)	323, 892
BsoBI	CYCGRG	2 cut(s)	61, 530
Bsp1286I	GDGCHC	3 cut(s)	68, 237, 767
BspACI	CCGC	5 cut(s)	27, 44, 56, 84, 561
BspANI	GGCC	2 cut(s)	323, 892
BspCNI	CTCAG	1 cut(s)	853
BspLI	GGNNCC	1 cut(s)	208
BspMAI	CTGCAG	1 cut(s)	745
BsrBI	CCGCTC	1 cut(s)	46
BsrDI	GCAATG	1 cut(s)	784
BsrI	ACTGG	2 cut(s)	276, 562
BssECI	CCNNGG	4 cut(s)	22, 169, 651, 676
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	1 cut(s)	169
Bst4CI	ACNGT	6 cut(s)	178, 244, 352, 505, 632, 685
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstC8I	GCNNGC	3 cut(s)	193, 402, 853
BstDEI	CTNAG	1 cut(s)	861
BstDSI	CCRYGG	3 cut(s)	22, 651, 676
BstENI	CCTNNNNNAGG	1 cut(s)	328
BstF5I	GGATG	4 cut(s)	39, 515, 700, 871
BstHHI	GCGC	1 cut(s)	857
BstMAI	GTCTC	3 cut(s)	341, 533, 638
BstMWI	GCNNNNNNNGC	5 cut(s)	72, 410, 647, 800, 898
BstNSI	RCATGY	1 cut(s)	844
BstSFI	CTRYAG	2 cut(s)	351, 741
BstSLI	GKGCMC	1 cut(s)	767
BstV1I	GCAGC	3 cut(s)	713, 727, 755
BsuRI	GGCC	2 cut(s)	323, 892
BtgI	CCRYGG	3 cut(s)	22, 651, 676
BtsCI	GGATG	4 cut(s)	39, 515, 700, 871
BtsIMutI	CAGTG	1 cut(s)	240
Cac8I	GCNNGC	3 cut(s)	193, 402, 853
CaiI	CAGNNNCTG	3 cut(s)	479, 636, 647
CfoI	GCGC	1 cut(s)	857
Csp6I	GTAC	1 cut(s)	681
CspCI	CAANNNNNGTGG	2 cut(s)	199, 234
CviAII	CATG	2 cut(s)	277, 841
CviQI	GTAC	1 cut(s)	681
DdeI	CTNAG	1 cut(s)	861
EciI	GGCGGA	1 cut(s)	576
Ecl136II	GAGCTC	1 cut(s)	66
Eco130I	CCWWGG	1 cut(s)	169
Eco147I	AGGCCT	1 cut(s)	323
Eco24I	GRGCYC	2 cut(s)	68, 237
Eco53kI	GAGCTC	1 cut(s)	66
Eco88I	CYCGRG	2 cut(s)	61, 530
EcoICRI	GAGCTC	1 cut(s)	66
EcoNI	CCTNNNNNAGG	1 cut(s)	328
EcoT14I	CCWWGG	1 cut(s)	169
EcoT38I	GRGCYC	2 cut(s)	68, 237
ErhI	CCWWGG	1 cut(s)	169
FaeI	CATG	2 cut(s)	280, 844
FaqI	GGGAC	4 cut(s)	50, 514, 608, 631
FatI	CATG	2 cut(s)	276, 840
FauI	CCCGC	2 cut(s)	51, 91
FauNDI	CATATG	1 cut(s)	622
Fnu4HI	GCNGC	3 cut(s)	702, 741, 744
FokI	GGATG	4 cut(s)	26, 522, 707, 878
FriOI	GRGCYC	2 cut(s)	68, 237
Fsp4HI	GCNGC	3 cut(s)	702, 741, 744
GlaI	GCGC	1 cut(s)	856
GluI	GCNGC	3 cut(s)	702, 741, 744
HaeIII	GGCC	2 cut(s)	323, 892
HhaI	GCGC	1 cut(s)	857
Hin1I	GRCGYC	1 cut(s)	93
Hin1II	CATG	2 cut(s)	280, 844
Hin6I	GCGC	1 cut(s)	855
HinP1I	GCGC	1 cut(s)	855
HincII	GTYRAC	1 cut(s)	571
HindII	GTYRAC	1 cut(s)	571
HindIII	AAGCTT	1 cut(s)	189
HinfI	GANTC	1 cut(s)	356
HphI	GGTGA	2 cut(s)	229, 674
Hpy166II	GTNNAC	2 cut(s)	494, 571
Hpy188I	TCNGA	2 cut(s)	588, 877
Hpy188III	TCNNGA	3 cut(s)	113, 160, 532
Hpy8I	GTNNAC	2 cut(s)	494, 571
Hpy99I	CGWCG	1 cut(s)	98
HpyAV	CCTTC	2 cut(s)	455, 903
HpyCH4III	ACNGT	6 cut(s)	178, 244, 352, 505, 632, 685
HpyCH4IV	ACGT	1 cut(s)	93
HpyF10VI	GCNNNNNNNGC	5 cut(s)	72, 410, 647, 800, 898
HpyF3I	CTNAG	1 cut(s)	861
HpySE526I	ACGT	1 cut(s)	93
Hsp92I	GRCGYC	1 cut(s)	93
Hsp92II	CATG	2 cut(s)	280, 844
HspAI	GCGC	1 cut(s)	855
LmnI	GCTCC	2 cut(s)	221, 314
Lsp1109I	GCAGC	3 cut(s)	713, 727, 755
LweI	GCATC	2 cut(s)	204, 500
MaeII	ACGT	1 cut(s)	93
MaeIII	GTNAC	1 cut(s)	814
MbiI	CCGCTC	1 cut(s)	46
MboII	GAAGA	1 cut(s)	472
MhlI	GDGCHC	3 cut(s)	68, 237, 767
MluCI	AATT	2 cut(s)	535, 904
MmeI	TCCRAC	2 cut(s)	487, 566
MnlI	CCTC	7 cut(s)	70, 300, 313, 384, 751, 754, 856
MseI	TTAA	1 cut(s)	138
MslI	CAYNNNNRTG	3 cut(s)	27, 138, 453
MspA1I	CMGCKG	1 cut(s)	704
MwoI	GCNNNNNNNGC	5 cut(s)	72, 410, 647, 800, 898
NdeI	CATATG	1 cut(s)	622
NlaIII	CATG	2 cut(s)	280, 844
NlaIV	GGNNCC	1 cut(s)	208
NmuCI	GTSAC	1 cut(s)	814
NspI	RCATGY	1 cut(s)	844
OliI	CACNNNNGTG	1 cut(s)	27
PaeR7I	CTCGAG	1 cut(s)	61
PceI	AGGCCT	1 cut(s)	323
PfeI	GAWTC	1 cut(s)	356
PkrI	GCNGC	3 cut(s)	703, 742, 745
Psp124BI	GAGCTC	1 cut(s)	68
PspN4I	GGNNCC	1 cut(s)	208
PspXI	VCTCGAGB	1 cut(s)	61
PstI	CTGCAG	1 cut(s)	745
PstNI	CAGNNNCTG	3 cut(s)	479, 636, 647
PvuII	CAGCTG	1 cut(s)	704
RsaI	GTAC	1 cut(s)	682
RsaNI	GTAC	1 cut(s)	681
RseI	CAYNNNNRTG	3 cut(s)	27, 138, 453
SacI	GAGCTC	1 cut(s)	68
SaqAI	TTAA	1 cut(s)	138
SatI	GCNGC	3 cut(s)	702, 741, 744
SduI	GDGCHC	3 cut(s)	68, 237, 767
SfaNI	GCATC	2 cut(s)	204, 500
SfcI	CTRYAG	2 cut(s)	351, 741
Sfr274I	CTCGAG	1 cut(s)	61
SlaI	CTCGAG	1 cut(s)	61
SmiMI	CAYNNNNRTG	3 cut(s)	27, 138, 453
SmlI	CTYRAG	2 cut(s)	61, 395
SmoI	CTYRAG	2 cut(s)	61, 395
Sse9I	AATT	2 cut(s)	535, 904
SseBI	AGGCCT	1 cut(s)	323
SsiI	CCGC	5 cut(s)	27, 44, 56, 84, 561
SstI	GAGCTC	1 cut(s)	68
StuI	AGGCCT	1 cut(s)	323
StyI	CCWWGG	1 cut(s)	169
TaaI	ACNGT	6 cut(s)	178, 244, 352, 505, 632, 685
TaiI	ACGT	1 cut(s)	96
TaqI	TCGA	3 cut(s)	62, 522, 847
TasI	AATT	2 cut(s)	535, 904
TfiI	GAWTC	1 cut(s)	356
Tru1I	TTAA	1 cut(s)	138
Tru9I	TTAA	1 cut(s)	138
TscAI	CASTG	1 cut(s)	247
TseFI	GTSAC	1 cut(s)	814
TseI	GCWGC	3 cut(s)	701, 740, 743
Tsp45I	GTSAC	1 cut(s)	814
TspDTI	ATGAA	1 cut(s)	358
TspGWI	ACGGA	1 cut(s)	665
TspRI	CASTG	1 cut(s)	247
XagI	CCTNNNNNAGG	1 cut(s)	328
XapI	RAATTY	1 cut(s)	535
XceI	RCATGY	1 cut(s)	844
XhoI	CTCGAG	1 cut(s)	61
ZraI	GACGTC	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.