Prupe.5G212300_v2.0.a1

microtubule motor activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
16819181 .. 16824580
5400 bp
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UTR
Exon/CDS
Intron
Prupe.5G212300.1

Sequence Viewer

Length: 240 bp
ATGTTACTAATATTATTACTCCTTTGGTCAACGACACCTCGGGTAACCGACCACCGCCTCCGAGGGTCGACATCCACCTCTTCCTCCCTTAGCTCCTCGCTCGCTCTCCCACAACGAACCTCCACCATCACCGGTCAGGTGGTACAAATGCTTAACGAGGAGATAAAGCTTCGCAATGAGGAGTTGGAAGCGAAGGATGAAACTATAAGGAAACTAAGGGAGGAGTTGGAAGCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

8.95

Weight (kDa)

5.78

Isoelectric Point (pI)

45.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 68
AciI CCGC 1 cut(s) 55
AfaI GTAC 1 cut(s) 144
AgeI ACCGGT 1 cut(s) 131
AluBI AGCT 2 cut(s) 93, 169
AluI AGCT 2 cut(s) 93, 169
Ama87I CYCGRG 1 cut(s) 39
AsiGI ACCGGT 1 cut(s) 131
AsuHPI GGTGA 1 cut(s) 121
AvaI CYCGRG 1 cut(s) 39
BccI CCATC 1 cut(s) 134
BmeT110I CYCGRG 1 cut(s) 39
Bpu10I CCTNAGC 1 cut(s) 89
BsaJI CCNNGG 2 cut(s) 38, 61
BsaWI WCCGGW 1 cut(s) 131
Bse118I RCCGGY 1 cut(s) 131
Bse3DI GCAATG 1 cut(s) 181
BseDI CCNNGG 2 cut(s) 38, 61
BseGI GGATG 2 cut(s) 71, 202
BseMI GCAATG 1 cut(s) 181
BseRI GAGGAG 4 cut(s) 85, 173, 194, 236
BshTI ACCGGT 1 cut(s) 131
BsiHKCI CYCGRG 1 cut(s) 39
BsiSI CCGG 1 cut(s) 132
BsoBI CYCGRG 1 cut(s) 39
BspACI CCGC 1 cut(s) 55
BsrDI GCAATG 1 cut(s) 181
BsrFI RCCGGY 1 cut(s) 131
BssAI RCCGGY 1 cut(s) 131
BssECI CCNNGG 2 cut(s) 38, 61
Bst6I CTCTTC 1 cut(s) 85
BstC8I GCNNGC 1 cut(s) 102
BstDEI CTNAG 2 cut(s) 89, 215
BstEII GGTNACC 1 cut(s) 43
BstF5I GGATG 2 cut(s) 71, 202
BstPI GGTNACC 1 cut(s) 43
BtsCI GGATG 2 cut(s) 71, 202
Cac8I GCNNGC 1 cut(s) 102
Cfr10I RCCGGY 1 cut(s) 131
Csp6I GTAC 1 cut(s) 143
CspAI ACCGGT 1 cut(s) 131
CviJI RGCY 2 cut(s) 93, 169
CviKI_1 RGCY 2 cut(s) 93, 169
CviQI GTAC 1 cut(s) 143
DdeI CTNAG 2 cut(s) 89, 215
Eam1104I CTCTTC 1 cut(s) 85
EarI CTCTTC 1 cut(s) 85
Eco88I CYCGRG 1 cut(s) 39
Eco91I GGTNACC 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 43
FaiI YATR 1 cut(s) 206
FblI GTMKAC 1 cut(s) 68
FokI GGATG 2 cut(s) 58, 209
HapII CCGG 1 cut(s) 132
HincII GTYRAC 2 cut(s) 30, 69
HindII GTYRAC 2 cut(s) 30, 69
HindIII AAGCTT 1 cut(s) 167
HpaII CCGG 1 cut(s) 132
HphI GGTGA 1 cut(s) 121
Hpy166II GTNNAC 2 cut(s) 30, 69
Hpy188I TCNGA 1 cut(s) 62
Hpy8I GTNNAC 2 cut(s) 30, 69
HpyAV CCTTC 1 cut(s) 187
HpyF3I CTNAG 2 cut(s) 89, 215
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 2 cut(s) 122, 145
MaeIII GTNAC 2 cut(s) 3, 43
MboII GAAGA 1 cut(s) 72
MluCI AATT 1 cut(s) 235
MmeI TCCRAC 2 cut(s) 165, 207
MseI TTAA 2 cut(s) 153, 238
MspI CCGG 1 cut(s) 132
PinAI ACCGGT 1 cut(s) 131
PspEI GGTNACC 1 cut(s) 43
RsaI GTAC 1 cut(s) 144
RsaNI GTAC 1 cut(s) 143
SalI GTCGAC 1 cut(s) 67
SaqAI TTAA 2 cut(s) 153, 238
SetI ASST 6 cut(s) 40, 80, 95, 122, 141, 171
SgeI CNNG 8 cut(s) 51, 53, 74, 109, 113, 144, 149, 169
Sse9I AATT 1 cut(s) 235
SsiI CCGC 1 cut(s) 55
SspI AATATT 1 cut(s) 12
TaqI TCGA 1 cut(s) 68
TasI AATT 1 cut(s) 235
Tru1I TTAA 2 cut(s) 153, 238
Tru9I TTAA 2 cut(s) 153, 238
TspDTI ATGAA 1 cut(s) 213
XmiI GTMKAC 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.