Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0024554

Physical Location & Seq

Genomic Coordinates Forward (+)

17346310 .. 17347178

Gene Structure 869 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G223700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 492 bp

ATGTTGGAAGATGAAGTTAGGCGCCTGAAGAAGATTGGGAAAGATGGAGCTTTTCACAAGAAGCTAGCCTCGGAGAACATTAACACGGTACAAGACTTTTTGAAGTTGTTTGTGGTTAACCGGTCAAAGCTAAGAAGGATTTTAGGAGTTGGAATGTCAGAGAAAATGTGGGAGGTAACAGTAAAGCATGCCAGAACCTGCGTTATGGGCAACAAAATGTTCGTTCATCATGGTGCTCATTTTGAGCTTTTTTTGATTCCGATATGTGAAGGGCTATCGACAACCTATGCAAACTGGAATTCCTCGGAAATGGTCGACGCAATCTTGAATGAGACTGCCTTATTAACACAAGGTGATTATGTAGTGGAGCAATATCCCAACCATCATACTGAGGCAATGTCAAGATCAGCATTCGATCAAAATGGACACCTGGGCCTAGCGGCAGCGGATAATCACCCTAAATCTGTGAATGTGGGTTACCTATCACCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002237 GO:0002239 GO:0002682 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009889 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032350 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043902 GO:0044424 GO:0044464 GO:0045088 GO:0046885 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071216 GO:0071219 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calmodulin_bind

Protein Analysis

164

Amino Acids

18.35

Weight (kDa)

7.13

Isoelectric Point (pI)

42.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0024554)

Species	Orthologous Gene IDs
prunus_persica	Prupe.5G223700_v2.0.a1
rosa_multiflora	Rmu_co8085960.1_g000001 Rmu_sc0031403.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	206
AccB1I	GGYRCC	1 cut(s)	21
AccI	GTMKAC	1 cut(s)	315
AciI	CCGC	2 cut(s)	440, 446
AcsI	RAATTY	1 cut(s)	298
AcuI	CTGAAG	1 cut(s)	47
AcyI	GRCGYC	1 cut(s)	22
AdeI	CACNNNGTG	1 cut(s)	353
AfaI	GTAC	1 cut(s)	90
AgeI	ACCGGT	1 cut(s)	120
AgsI	TTSAA	2 cut(s)	103, 328
AjnI	CCWGG	1 cut(s)	429
AluBI	AGCT	4 cut(s)	50, 64, 130, 247
AluI	AGCT	4 cut(s)	50, 64, 130, 247
Alw21I	GWGCWC	1 cut(s)	238
Alw26I	GTCTC	1 cut(s)	326
AlwNI	CAGNNNCTG	1 cut(s)	198
AoxI	GGCC	1 cut(s)	433
ApeKI	GCWGC	1 cut(s)	443
ApoI	RAATTY	1 cut(s)	298
AsiGI	ACCGGT	1 cut(s)	120
AspLEI	GCGC	1 cut(s)	24
AspS9I	GGNCC	1 cut(s)	433
AsuHPI	GGTGA	3 cut(s)	365, 446, 477
AsuNHI	GCTAGC	1 cut(s)	64
BanI	GGYRCC	1 cut(s)	21
Bbv12I	GWGCWC	1 cut(s)	238
BbvI	GCAGC	1 cut(s)	455
BccI	CCATC	2 cut(s)	38, 390
BciT130I	CCWGG	1 cut(s)	431
BcoDI	GTCTC	1 cut(s)	326
BfaI	CTAG	2 cut(s)	65, 437
BfoI	RGCGCY	1 cut(s)	25
BfuAI	ACCTGC	1 cut(s)	206
BisI	GCNGC	2 cut(s)	441, 444
BlsI	GCNGC	2 cut(s)	442, 445
Bme1390I	CCNGG	1 cut(s)	431
BmgT120I	GGNCC	1 cut(s)	433
BmiI	GGNNCC	1 cut(s)	23
BmrFI	CCNGG	1 cut(s)	431
BmtI	GCTAGC	1 cut(s)	68
BsaHI	GRCGYC	1 cut(s)	22
BsaJI	CCNNGG	3 cut(s)	69, 303, 430
BsaWI	WCCGGW	1 cut(s)	120
Bse118I	RCCGGY	1 cut(s)	120
Bse1I	ACTGG	1 cut(s)	299
Bse3DI	GCAATG	1 cut(s)	402
BseBI	CCWGG	1 cut(s)	431
BseDI	CCNNGG	3 cut(s)	69, 303, 430
BseMI	GCAATG	1 cut(s)	402
BseMII	CTCAG	1 cut(s)	381
BseNI	ACTGG	1 cut(s)	299
BseXI	GCAGC	1 cut(s)	455
BshFI	GGCC	1 cut(s)	435
BshNI	GGYRCC	1 cut(s)	21
BshTI	ACCGGT	1 cut(s)	120
BsiHKAI	GWGCWC	1 cut(s)	238
BsiSI	CCGG	1 cut(s)	121
BsmAI	GTCTC	1 cut(s)	326
BsmI	GAATGC	1 cut(s)	410
BsnI	GGCC	1 cut(s)	435
Bsp1286I	GDGCHC	1 cut(s)	238
Bsp143I	GATC	2 cut(s)	404, 415
BspACI	CCGC	2 cut(s)	440, 446
BspANI	GGCC	1 cut(s)	435
BspCNI	CTCAG	1 cut(s)	382
BspLI	GGNNCC	1 cut(s)	23
BspMI	ACCTGC	1 cut(s)	206
BspOI	GCTAGC	1 cut(s)	68
BspT107I	GGYRCC	1 cut(s)	21
BsrDI	GCAATG	1 cut(s)	402
BsrFI	RCCGGY	1 cut(s)	120
BsrI	ACTGG	1 cut(s)	299
BssAI	RCCGGY	1 cut(s)	120
BssECI	CCNNGG	3 cut(s)	69, 303, 430
BssMI	GATC	2 cut(s)	404, 415
BssNI	GRCGYC	1 cut(s)	22
Bst2UI	CCWGG	1 cut(s)	431
Bst4CI	ACNGT	2 cut(s)	88, 181
BstACI	GRCGYC	1 cut(s)	22
BstC8I	GCNNGC	2 cut(s)	66, 189
BstDEI	CTNAG	2 cut(s)	131, 390
BstEII	GGTNACC	1 cut(s)	476
BstH2I	RGCGCY	1 cut(s)	25
BstHHI	GCGC	1 cut(s)	24
BstKTI	GATC	2 cut(s)	407, 418
BstMAI	GTCTC	1 cut(s)	326
BstMBI	GATC	2 cut(s)	404, 415
BstMWI	GCNNNNNNNGC	1 cut(s)	207
BstNI	CCWGG	1 cut(s)	431
BstNSI	RCATGY	1 cut(s)	191
BstPI	GGTNACC	1 cut(s)	476
BstSCI	CCNGG	1 cut(s)	429
BstV1I	GCAGC	1 cut(s)	455
BsuRI	GGCC	1 cut(s)	435
BveI	ACCTGC	1 cut(s)	206
Cac8I	GCNNGC	2 cut(s)	66, 189
CaiI	CAGNNNCTG	1 cut(s)	198
CfoI	GCGC	1 cut(s)	24
Cfr10I	RCCGGY	1 cut(s)	120
Cfr13I	GGNCC	1 cut(s)	433
CseI	GACGC	1 cut(s)	326
Csp6I	GTAC	1 cut(s)	89
CspAI	ACCGGT	1 cut(s)	120
CviAII	CATG	2 cut(s)	188, 230
CviJI	RGCY	7 cut(s)	50, 64, 68, 130, 247, 274, 435
CviKI_1	RGCY	7 cut(s)	50, 64, 68, 130, 247, 274, 435
CviQI	GTAC	1 cut(s)	89
DdeI	CTNAG	2 cut(s)	131, 390
DinI	GGCGCC	1 cut(s)	23
DpnI	GATC	2 cut(s)	406, 417
DpnII	GATC	2 cut(s)	404, 415
DraIII	CACNNNGTG	1 cut(s)	353
Eco57I	CTGAAG	1 cut(s)	47
Eco91I	GGTNACC	1 cut(s)	476
EcoO65I	GGTNACC	1 cut(s)	476
EcoRI	GAATTC	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	429
EgeI	GGCGCC	1 cut(s)	23
EheI	GGCGCC	1 cut(s)	23
FaeI	CATG	2 cut(s)	191, 233
FaiI	YATR	7 cut(s)	189, 206, 231, 265, 288, 360, 387
FatI	CATG	2 cut(s)	187, 229
FblI	GTMKAC	1 cut(s)	315
Fnu4HI	GCNGC	2 cut(s)	441, 444
Fsp4HI	GCNGC	2 cut(s)	441, 444
FspBI	CTAG	2 cut(s)	65, 437
GlaI	GCGC	1 cut(s)	23
GluI	GCNGC	2 cut(s)	441, 444
HaeII	RGCGCY	1 cut(s)	25
HaeIII	GGCC	1 cut(s)	435
HapII	CCGG	1 cut(s)	121
HgaI	GACGC	1 cut(s)	326
HhaI	GCGC	1 cut(s)	24
Hin1I	GRCGYC	1 cut(s)	22
Hin1II	CATG	2 cut(s)	191, 233
Hin6I	GCGC	1 cut(s)	22
HinP1I	GCGC	1 cut(s)	22
HincII	GTYRAC	2 cut(s)	118, 316
HindII	GTYRAC	2 cut(s)	118, 316
HinfI	GANTC	1 cut(s)	256
HpaI	GTTAAC	1 cut(s)	118
HpaII	CCGG	1 cut(s)	121
HphI	GGTGA	3 cut(s)	365, 446, 477
Hpy166II	GTNNAC	2 cut(s)	118, 316
Hpy188I	TCNGA	4 cut(s)	73, 160, 261, 307
Hpy188III	TCNNGA	2 cut(s)	325, 402
Hpy8I	GTNNAC	2 cut(s)	118, 316
Hpy99I	CGWCG	1 cut(s)	320
HpyAV	CCTTC	2 cut(s)	129, 263
HpyCH4III	ACNGT	2 cut(s)	88, 181
HpyCH4V	TGCA	1 cut(s)	290
HpyF10VI	GCNNNNNNNGC	1 cut(s)	207
HpyF3I	CTNAG	2 cut(s)	131, 390
Hsp92I	GRCGYC	1 cut(s)	22
Hsp92II	CATG	2 cut(s)	191, 233
HspAI	GCGC	1 cut(s)	22
KasI	GGCGCC	1 cut(s)	21
KspAI	GTTAAC	1 cut(s)	118
Kzo9I	GATC	2 cut(s)	404, 415
LmnI	GCTCC	2 cut(s)	47, 367
LpnPI	CCDG	7 cut(s)	38, 134, 205, 211, 280, 416, 443
Lsp1109I	GCAGC	1 cut(s)	455
MaeI	CTAG	2 cut(s)	65, 437
MaeIII	GTNAC	2 cut(s)	175, 476
MalI	GATC	2 cut(s)	406, 417
MboI	GATC	2 cut(s)	404, 415
MboII	GAAGA	3 cut(s)	20, 40, 43
MhlI	GDGCHC	1 cut(s)	238
MluCI	AATT	1 cut(s)	298
Mly113I	GGCGCC	1 cut(s)	22
MmeI	TCCRAC	1 cut(s)	130
MnlI	CCTC	4 cut(s)	79, 166, 313, 385
MseI	TTAA	3 cut(s)	81, 117, 344
MslI	CAYNNNNRTG	1 cut(s)	231
MspA1I	CMGCKG	1 cut(s)	446
MspI	CCGG	1 cut(s)	121
MspR9I	CCNGG	1 cut(s)	431
Mva1269I	GAATGC	1 cut(s)	410
MvaI	CCWGG	1 cut(s)	431
MwoI	GCNNNNNNNGC	1 cut(s)	207
NarI	GGCGCC	1 cut(s)	22
NdeII	GATC	2 cut(s)	404, 415
NheI	GCTAGC	1 cut(s)	64
NlaIII	CATG	2 cut(s)	191, 233
NlaIV	GGNNCC	1 cut(s)	23
NspI	RCATGY	1 cut(s)	191
PaeI	GCATGC	1 cut(s)	191
PctI	GAATGC	1 cut(s)	410
PfeI	GAWTC	1 cut(s)	256
PinAI	ACCGGT	1 cut(s)	120
PkrI	GCNGC	2 cut(s)	442, 445
PluTI	GGCGCC	1 cut(s)	25
Psp6I	CCWGG	1 cut(s)	429
PspEI	GGTNACC	1 cut(s)	476
PspGI	CCWGG	1 cut(s)	429
PspN4I	GGNNCC	1 cut(s)	23
PspPI	GGNCC	1 cut(s)	433
PstNI	CAGNNNCTG	1 cut(s)	198
RsaI	GTAC	1 cut(s)	90
RsaNI	GTAC	1 cut(s)	89
RseI	CAYNNNNRTG	1 cut(s)	231
SalI	GTCGAC	1 cut(s)	314
SaqAI	TTAA	3 cut(s)	81, 117, 344
SatI	GCNGC	2 cut(s)	441, 444
Sau3AI	GATC	2 cut(s)	404, 415
Sau96I	GGNCC	1 cut(s)	433
ScrFI	CCNGG	1 cut(s)	431
SduI	GDGCHC	1 cut(s)	238
SfoI	GGCGCC	1 cut(s)	23
SmiMI	CAYNNNNRTG	1 cut(s)	231
SphI	GCATGC	1 cut(s)	191
Sse9I	AATT	1 cut(s)	298
SsiI	CCGC	2 cut(s)	440, 446
SspDI	GGCGCC	1 cut(s)	21
SspMI	CTAG	2 cut(s)	65, 437
StyD4I	CCNGG	1 cut(s)	429
TaaI	ACNGT	2 cut(s)	88, 181
TaqI	TCGA	3 cut(s)	278, 315, 414
TasI	AATT	1 cut(s)	298
TauI	GCSGC	1 cut(s)	443
TfiI	GAWTC	1 cut(s)	256
Tru1I	TTAA	3 cut(s)	81, 117, 344
Tru9I	TTAA	3 cut(s)	81, 117, 344
TseI	GCWGC	1 cut(s)	443
TspDTI	ATGAA	2 cut(s)	27, 215
XapI	RAATTY	1 cut(s)	298
XceI	RCATGY	1 cut(s)	191
XmiI	GTMKAC	1 cut(s)	315
XspI	CTAG	2 cut(s)	65, 437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.