Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0029019

Physical Location & Seq

Genomic Coordinates Reverse (-)

2405663 .. 2409880

Gene Structure 4218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G030800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 414 bp

ATGGAAGTACTCTCATACAGTTCTGCACCATGCTATGATACTGTTAATTTAAGGTGGAAATTGATTGTGATAAGCTCAAGTTCACATCAATTCAGTCTCCTAGGTTTTAGAAAAAACAGAGTTTTTGGTGCTAAATTTGATGTTAGAAGGAAATTTTTGAGCTGTTACAATTTAGATCAGCCTTTCTTGAAGCAACTAAATCACCAAGGAGGTTTTAGGTCATTAGACACCGGTGAAAACTTCAAACATGTTGGTCCAATTTTATCAAGTGGAAGCTCTGATGGCTACGTAATTGAAGGGGAAGAGAATGAAAGTATTTCGAAAACAGGGGAACCAGTAACTAAAGTTTTGAGTCCTGGTCTACCAGATGAATCCAAAGGTGAATCGGGTGCGCCAGTAAATAGTTGCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006778 GO:0006787 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009507 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009987 GO:0015994 GO:0015996 GO:0016020 GO:0016787 GO:0016788 GO:0019439 GO:0031976 GO:0031984 GO:0033013 GO:0033015 GO:0034357 GO:0034641 GO:0042440 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044270 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046149 GO:0046483 GO:0046700 GO:0051186 GO:0051187 GO:0052689 GO:0055035 GO:0071704 GO:0080124 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Abhydrolase_6

Protein Analysis

138

Amino Acids

15.1

Weight (kDa)

6.82

Isoelectric Point (pI)

51.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0029019)

Species	Orthologous Gene IDs
prunus_persica	Prupe.6G030800_v2.0.a1
rosa_samantha	Rh1DG035600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	361
AcsI	RAATTY	2 cut(s)	134, 152
AfaI	GTAC	1 cut(s)	9
AflIII	ACRYGT	1 cut(s)	247
AgeI	ACCGGT	1 cut(s)	230
AgsI	TTSAA	3 cut(s)	190, 244, 296
AjnI	CCWGG	1 cut(s)	355
AluBI	AGCT	3 cut(s)	75, 162, 276
AluI	AGCT	3 cut(s)	75, 162, 276
Alw26I	GTCTC	1 cut(s)	101
ApoI	RAATTY	2 cut(s)	134, 152
AsiGI	ACCGGT	1 cut(s)	230
AspA2I	CCTAGG	1 cut(s)	100
AspLEI	GCGC	1 cut(s)	394
AspS9I	GGNCC	1 cut(s)	254
AsuHPI	GGTGA	3 cut(s)	194, 245, 392
AsuII	TTCGAA	1 cut(s)	320
AvaII	GGWCC	1 cut(s)	254
AvrII	CCTAGG	1 cut(s)	100
BccI	CCATC	1 cut(s)	275
BciT130I	CCWGG	1 cut(s)	357
BcoDI	GTCTC	1 cut(s)	101
BfaI	CTAG	1 cut(s)	101
BlnI	CCTAGG	1 cut(s)	100
BmcAI	AGTACT	1 cut(s)	9
Bme1390I	CCNGG	1 cut(s)	357
Bme18I	GGWCC	1 cut(s)	254
BmgT120I	GGNCC	1 cut(s)	254
BmiI	GGNNCC	1 cut(s)	333
BmrFI	CCNGG	1 cut(s)	357
Bpu14I	TTCGAA	1 cut(s)	320
BpuEI	CTTGAG	1 cut(s)	61
BsaAI	YACGTR	1 cut(s)	289
BsaJI	CCNNGG	2 cut(s)	100, 205
BsaWI	WCCGGW	1 cut(s)	230
Bse118I	RCCGGY	1 cut(s)	230
Bse1I	ACTGG	2 cut(s)	335, 395
BseBI	CCWGG	1 cut(s)	357
BseDI	CCNNGG	2 cut(s)	100, 205
BseNI	ACTGG	2 cut(s)	335, 395
BsgI	GTGCAG	1 cut(s)	9
BshTI	ACCGGT	1 cut(s)	230
BsiSI	CCGG	1 cut(s)	231
BsmAI	GTCTC	1 cut(s)	101
Bsp119I	TTCGAA	1 cut(s)	320
Bsp143I	GATC	1 cut(s)	175
BspLI	GGNNCC	1 cut(s)	333
BspT104I	TTCGAA	1 cut(s)	320
BsrFI	RCCGGY	1 cut(s)	230
BsrI	ACTGG	2 cut(s)	335, 395
BssAI	RCCGGY	1 cut(s)	230
BssECI	CCNNGG	2 cut(s)	100, 205
BssMI	GATC	1 cut(s)	175
BssT1I	CCWWGG	2 cut(s)	100, 205
Bst2UI	CCWGG	1 cut(s)	357
Bst4CI	ACNGT	2 cut(s)	20, 43
Bst6I	CTCTTC	1 cut(s)	297
BstBAI	YACGTR	1 cut(s)	289
BstBI	TTCGAA	1 cut(s)	320
BstHHI	GCGC	1 cut(s)	394
BstKTI	GATC	1 cut(s)	178
BstMAI	GTCTC	1 cut(s)	101
BstMBI	GATC	1 cut(s)	175
BstMWI	GCNNNNNNNGC	1 cut(s)	282
BstNI	CCWGG	1 cut(s)	357
BstNSI	RCATGY	1 cut(s)	251
BstSCI	CCNGG	1 cut(s)	355
BstSNI	TACGTA	1 cut(s)	289
CfoI	GCGC	1 cut(s)	394
Cfr10I	RCCGGY	1 cut(s)	230
Cfr13I	GGNCC	1 cut(s)	254
Csp6I	GTAC	1 cut(s)	8
CspAI	ACCGGT	1 cut(s)	230
CviAII	CATG	2 cut(s)	30, 248
CviJI	RGCY	5 cut(s)	75, 162, 181, 276, 285
CviKI_1	RGCY	5 cut(s)	75, 162, 181, 276, 285
CviQI	GTAC	1 cut(s)	8
DpnI	GATC	1 cut(s)	177
DpnII	GATC	1 cut(s)	175
Eam1104I	CTCTTC	1 cut(s)	297
EarI	CTCTTC	1 cut(s)	297
Eco105I	TACGTA	1 cut(s)	289
Eco130I	CCWWGG	2 cut(s)	100, 205
Eco47I	GGWCC	1 cut(s)	254
EcoRII	CCWGG	1 cut(s)	355
EcoT14I	CCWWGG	2 cut(s)	100, 205
ErhI	CCWWGG	2 cut(s)	100, 205
FaeI	CATG	2 cut(s)	33, 251
FaiI	YATR	4 cut(s)	16, 31, 36, 249
FatI	CATG	2 cut(s)	29, 247
FblI	GTMKAC	1 cut(s)	361
FspBI	CTAG	1 cut(s)	101
GlaI	GCGC	1 cut(s)	393
HapII	CCGG	1 cut(s)	231
HhaI	GCGC	1 cut(s)	394
Hin1II	CATG	2 cut(s)	33, 251
Hin6I	GCGC	1 cut(s)	392
HinP1I	GCGC	1 cut(s)	392
HinfI	GANTC	3 cut(s)	352, 371, 383
HpaII	CCGG	1 cut(s)	231
HphI	GGTGA	3 cut(s)	194, 245, 392
Hpy166II	GTNNAC	2 cut(s)	83, 362
Hpy188I	TCNGA	1 cut(s)	280
Hpy188III	TCNNGA	1 cut(s)	187
Hpy8I	GTNNAC	2 cut(s)	83, 362
HpyAV	CCTTC	2 cut(s)	141, 290
HpyCH4III	ACNGT	2 cut(s)	20, 43
HpyCH4IV	ACGT	1 cut(s)	288
HpyCH4V	TGCA	1 cut(s)	26
HpyF10VI	GCNNNNNNNGC	1 cut(s)	282
HpySE526I	ACGT	1 cut(s)	288
Hsp92II	CATG	2 cut(s)	33, 251
HspAI	GCGC	1 cut(s)	392
Kzo9I	GATC	1 cut(s)	175
LpnPI	CCDG	7 cut(s)	244, 312, 342, 348, 369, 378, 408
MaeI	CTAG	1 cut(s)	101
MaeII	ACGT	1 cut(s)	288
MaeIII	GTNAC	2 cut(s)	164, 337
MalI	GATC	1 cut(s)	177
MboI	GATC	1 cut(s)	175
MboII	GAAGA	1 cut(s)	314
MluCI	AATT	8 cut(s)	46, 59, 89, 134, 152, 169, 258, 291
MlyI	GAGTC	1 cut(s)	361
MnlI	CCTC	1 cut(s)	203
MseI	TTAA	2 cut(s)	45, 50
MspI	CCGG	1 cut(s)	231
MspR9I	CCNGG	1 cut(s)	357
MvaI	CCWGG	1 cut(s)	357
MwoI	GCNNNNNNNGC	1 cut(s)	282
NdeII	GATC	1 cut(s)	175
NlaIII	CATG	2 cut(s)	33, 251
NlaIV	GGNNCC	1 cut(s)	333
NspI	RCATGY	1 cut(s)	251
NspV	TTCGAA	1 cut(s)	320
PciI	ACATGT	1 cut(s)	247
PfeI	GAWTC	2 cut(s)	371, 383
PinAI	ACCGGT	1 cut(s)	230
PleI	GAGTC	1 cut(s)	360
PpsI	GAGTC	1 cut(s)	360
Ppu21I	YACGTR	1 cut(s)	289
PscI	ACATGT	1 cut(s)	247
Psp6I	CCWGG	1 cut(s)	355
PspGI	CCWGG	1 cut(s)	355
PspN4I	GGNNCC	1 cut(s)	333
PspPI	GGNCC	1 cut(s)	254
RsaI	GTAC	1 cut(s)	9
RsaNI	GTAC	1 cut(s)	8
SaqAI	TTAA	2 cut(s)	45, 50
Sau3AI	GATC	1 cut(s)	175
Sau96I	GGNCC	1 cut(s)	254
ScaI	AGTACT	1 cut(s)	9
SchI	GAGTC	1 cut(s)	361
ScrFI	CCNGG	1 cut(s)	357
SetI	ASST	9 cut(s)	56, 77, 106, 164, 214, 221, 278, 291, 382
SfuI	TTCGAA	1 cut(s)	320
SgrAI	CRCCGGYG	1 cut(s)	230
SinI	GGWCC	1 cut(s)	254
SmlI	CTYRAG	1 cut(s)	76
SmoI	CTYRAG	1 cut(s)	76
SnaBI	TACGTA	1 cut(s)	289
Sse9I	AATT	8 cut(s)	46, 59, 89, 134, 152, 169, 258, 291
SspMI	CTAG	1 cut(s)	101
StyD4I	CCNGG	1 cut(s)	355
StyI	CCWWGG	2 cut(s)	100, 205
TaaI	ACNGT	2 cut(s)	20, 43
TaiI	ACGT	1 cut(s)	291
TaqI	TCGA	1 cut(s)	320
TasI	AATT	8 cut(s)	46, 59, 89, 134, 152, 169, 258, 291
TatI	WGTACW	1 cut(s)	7
TfiI	GAWTC	2 cut(s)	371, 383
Tru1I	TTAA	2 cut(s)	45, 50
Tru9I	TTAA	2 cut(s)	45, 50
TspDTI	ATGAA	2 cut(s)	324, 384
VpaK11BI	GGWCC	1 cut(s)	254
XapI	RAATTY	2 cut(s)	134, 152
XceI	RCATGY	1 cut(s)	251
XmaJI	CCTAGG	1 cut(s)	100
XmiI	GTMKAC	1 cut(s)	361
XspI	CTAG	1 cut(s)	101
ZrmI	AGTACT	1 cut(s)	9

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.