Prupe.6G089200_v2.0.a1

Ankyrin repeat

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6102406 .. 6103928
1523 bp
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UTR
Exon/CDS
Intron
Prupe.6G089200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 156 bp
ATGCGTATATCTCTCTCTGTAAAGATTCTGTTGCTACTTCAGAAACAGCAACCGCCATGTGAGATGGAAGGGAGGGATATGAGGAATTCTGAGGAGTTGAGTGCCCTTGGTGTCAAAGATGAAGATTTGATACTGATAGTATGCAATGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

52

Amino Acids

5.71

Weight (kDa)

4.81

Isoelectric Point (pI)

47.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0021201)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 53
AcsI RAATTY 1 cut(s) 85
AcuI CTGAAG 1 cut(s) 23
ApeKI GCWGC 1 cut(s) 149
ApoI RAATTY 1 cut(s) 85
BaeGI GKGCMC 1 cut(s) 106
BarI GAAGNNNNNNTAC 2 cut(s) 114, 146
BbvI GCAGC 1 cut(s) 136
BccI CCATC 1 cut(s) 58
BisI GCNGC 1 cut(s) 150
BlsI GCNGC 1 cut(s) 151
BsaJI CCNNGG 1 cut(s) 106
Bse3DI GCAATG 1 cut(s) 151
BseDI CCNNGG 1 cut(s) 106
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 1 cut(s) 81
BseRI GAGGAG 1 cut(s) 107
BseSI GKGCMC 1 cut(s) 106
BseXI GCAGC 1 cut(s) 136
Bsp1286I GDGCHC 1 cut(s) 106
BspACI CCGC 1 cut(s) 53
BspCNI CTCAG 1 cut(s) 82
BsrDI GCAATG 1 cut(s) 151
BssECI CCNNGG 1 cut(s) 106
BssT1I CCWWGG 1 cut(s) 106
BstDEI CTNAG 1 cut(s) 90
BstSLI GKGCMC 1 cut(s) 106
BstV1I GCAGC 1 cut(s) 136
CviAII CATG 1 cut(s) 57
DdeI CTNAG 1 cut(s) 90
Eco130I CCWWGG 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 23
EcoRI GAATTC 1 cut(s) 85
EcoT14I CCWWGG 1 cut(s) 106
ErhI CCWWGG 1 cut(s) 106
FaeI CATG 1 cut(s) 60
FaiI YATR 4 cut(s) 8, 58, 80, 142
FatI CATG 1 cut(s) 56
Fnu4HI GCNGC 1 cut(s) 150
Fsp4HI GCNGC 1 cut(s) 150
GluI GCNGC 1 cut(s) 150
Hin1II CATG 1 cut(s) 60
HinfI GANTC 1 cut(s) 25
Hpy188I TCNGA 2 cut(s) 42, 91
HpyAV CCTTC 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 144
HpyF3I CTNAG 1 cut(s) 90
Hsp92II CATG 1 cut(s) 60
Lsp1109I GCAGC 1 cut(s) 136
MboII GAAGA 1 cut(s) 134
MhlI GDGCHC 1 cut(s) 106
MluCI AATT 1 cut(s) 85
MnlI CCTC 3 cut(s) 66, 75, 85
MseI TTAA 1 cut(s) 154
NlaIII CATG 1 cut(s) 60
PfeI GAWTC 1 cut(s) 25
PkrI GCNGC 1 cut(s) 151
SaqAI TTAA 1 cut(s) 154
SatI GCNGC 1 cut(s) 150
SduI GDGCHC 1 cut(s) 106
SgeI CNNG 2 cut(s) 69, 119
Sse9I AATT 1 cut(s) 85
SsiI CCGC 1 cut(s) 53
StyI CCWWGG 1 cut(s) 106
TasI AATT 1 cut(s) 85
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 1 cut(s) 154
Tru9I TTAA 1 cut(s) 154
TseI GCWGC 1 cut(s) 149
TspDTI ATGAA 1 cut(s) 135
XapI RAATTY 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.