Prupe.6G099100_v2.0.a1

Fasciclin-like arabinogalactan protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6896780 .. 6897667
888 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G099100.1

Sequence Viewer

Length: 888 bp
ATGGTAAAGCTTCAGCATCAGCCTCTTTTCTCACTCACACTTCTACTTATCTTGCTCTTCCATTGCACCAAAATCTTAGCCCAAGCTCCTGCCGCAGCCCCTGCTGCTGCTCCTGCAGCCCCAGTTGCCCCAGCTGCTCCAATTGCCCCAGCTGCCCCAATTGCCCCAGCTGCCCCATCAATTACAGGGCCAGCAGTTCCAGCACCACCAGCTGATGCCCCTGCACCTCCAGGCCCAACCAACATCACCAAAATCCTTGAAAAAGCAGGTGGCTTCAATGTCTTCATCCGCCTTTTAAAAAGCACCCAAATTGATAGACAGCTCTACAGTCAACTCAACAACTCAAATAGCCAACTCACCGTTTTAGCCCCAACTGACAGTGCCTTCTCAAGGCTCAGCACAGGCTCACTCAACTCTTTGGGCGATGAGCAAAAAGTGCAGCTCTTACAATTCCATCTGATCCCAGATTTTCTCACAATCCAAAACTTTCAAACTCTCAGCAATCCAGTGAGAACCCAAGCTGGAACTGGATTTCAGTATCCACTAAACATTACCACAACAGGCAGTTCAGTCAACATTTCCACTGGCCTTGTGAACACCTCCATTTCAGGCACCGTCTACTCTGATAATCAAATTGCTATTTACAAAGTTAACAGTGTGCTCCAGCCTTATGGTGTTTTTGCTCCCAAGCATCACCAACCGTCACCCGCTCCGGCACCTGCACAAGAGAAGCCTAAGAAGGAGTCTTCATCATCGGATTCTGATGACACTACTCCTGATGTTGCTGAAGTGAAGTCTGGTGCTATTCCTTGTCTGATCCCCAAGATTAATGCCATTGTCTCCACTGGAGTTGCTGTGGTTGCTGCTGCAGCATTAAGCTTCTCTTGA
Functional Annotation

Protein Analysis

296

Amino Acids

30.56

Weight (kDa)

8.51

Isoelectric Point (pI)

47.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028994)

Species Orthologous Gene IDs
prunus_persica Prupe.6G098900_v2.0.a1 Prupe.6G099100_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 257, 727
Acc36I ACCTGC 2 cut(s) 257, 727
AccB1I GGYRCC 2 cut(s) 611, 715
AccBSI CCGCTC 1 cut(s) 710
AccI GTMKAC 1 cut(s) 618
AciI CCGC 3 cut(s) 93, 289, 708
AclWI GGATC 2 cut(s) 454, 811
AcuI CTGAAG 1 cut(s) 807
AfiI CCNNNNNNNGG 1 cut(s) 390
AgsI TTSAA 3 cut(s) 260, 277, 491
AjnI CCWGG 1 cut(s) 229
Alw21I GWGCWC 1 cut(s) 663
Alw26I GTCTC 1 cut(s) 844
AlwI GGATC 2 cut(s) 454, 811
AlwNI CAGNNNCTG 1 cut(s) 101
AoxI GGCC 3 cut(s) 188, 232, 586
AseI ATTAAT 1 cut(s) 828
AspS9I GGNCC 2 cut(s) 188, 233
AsuHPI GGTGA 4 cut(s) 238, 349, 686, 696
BanI GGYRCC 2 cut(s) 611, 715
BbsI GAAGAC 2 cut(s) 274, 738
Bbv12I GWGCWC 1 cut(s) 663
BccI CCATC 2 cut(s) 184, 462
BciT130I CCWGG 1 cut(s) 231
BciVI GTATCC 1 cut(s) 549
BcoDI GTCTC 1 cut(s) 844
BfmI CTRYAG 3 cut(s) 114, 325, 867
BfuAI ACCTGC 2 cut(s) 257, 727
BfuI GTATCC 1 cut(s) 549
BlpI GCTNAGC 1 cut(s) 395
Bme1390I CCNGG 1 cut(s) 231
BmgT120I GGNCC 2 cut(s) 188, 233
BmiI GGNNCC 2 cut(s) 613, 717
BmrFI CCNGG 1 cut(s) 231
BmrI ACTGGG 1 cut(s) 116
BmsI GCATC 3 cut(s) 25, 205, 700
BmuI ACTGGG 1 cut(s) 116
BpiI GAAGAC 2 cut(s) 274, 738
BpmI CTGGAG 3 cut(s) 213, 647, 867
Bpu1102I GCTNAGC 1 cut(s) 395
BpuEI CTTGAG 1 cut(s) 373
BsaXI ACNNNNNCTCC 2 cut(s) 840, 870
Bsc4I CCNNNNNNNGG 1 cut(s) 390
Bse1I ACTGG 5 cut(s) 122, 506, 532, 589, 850
Bse3DI GCAATG 1 cut(s) 61
BseBI CCWGG 1 cut(s) 231
BseGI GGATG 1 cut(s) 285
BseLI CCNNNNNNNGG 1 cut(s) 390
BseMI GCAATG 1 cut(s) 61
BseMII CTCAG 2 cut(s) 409, 511
BseNI ACTGG 5 cut(s) 122, 506, 532, 589, 850
BseYI CCCAGC 3 cut(s) 130, 148, 166
BsgI GTGCAG 3 cut(s) 207, 458, 705
BshFI GGCC 3 cut(s) 190, 234, 588
BshNI GGYRCC 2 cut(s) 611, 715
BsiHKAI GWGCWC 1 cut(s) 663
BsiSI CCGG 1 cut(s) 713
BslI CCNNNNNNNGG 1 cut(s) 390
BsmAI GTCTC 1 cut(s) 844
BsnI GGCC 3 cut(s) 190, 234, 588
Bsp1286I GDGCHC 1 cut(s) 663
Bsp143I GATC 2 cut(s) 459, 816
Bsp1720I GCTNAGC 1 cut(s) 395
BspACI CCGC 3 cut(s) 93, 289, 708
BspANI GGCC 3 cut(s) 190, 234, 588
BspCNI CTCAG 2 cut(s) 408, 510
BspLI GGNNCC 2 cut(s) 613, 717
BspMAI CTGCAG 2 cut(s) 118, 871
BspMI ACCTGC 2 cut(s) 257, 727
BspPI GGATC 2 cut(s) 454, 811
BspQI GCTCTTC 1 cut(s) 62
BspT107I GGYRCC 2 cut(s) 611, 715
BsrBI CCGCTC 1 cut(s) 710
BsrDI GCAATG 1 cut(s) 61
BsrI ACTGG 5 cut(s) 122, 506, 532, 589, 850
BssMI GATC 2 cut(s) 459, 816
Bst2UI CCWGG 1 cut(s) 231
Bst4CI ACNGT 6 cut(s) 329, 361, 380, 616, 656, 702
Bst6I CTCTTC 1 cut(s) 62
BstAPI GCANNNNNTGC 2 cut(s) 101, 436
BstC8I GCNNGC 1 cut(s) 192
BstDEI CTNAG 4 cut(s) 76, 395, 497, 735
BstENI CCTNNNNNAGG 1 cut(s) 388
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 2 cut(s) 462, 819
BstMAI GTCTC 1 cut(s) 844
BstMBI GATC 2 cut(s) 459, 816
BstNI CCWGG 1 cut(s) 231
BstSCI CCNGG 1 cut(s) 229
BstSFI CTRYAG 3 cut(s) 114, 325, 867
BstV2I GAAGAC 2 cut(s) 274, 738
BstXI CCANNNNNNTGG 1 cut(s) 671
BsuI GTATCC 1 cut(s) 549
BsuRI GGCC 3 cut(s) 190, 234, 588
BtgZI GCGATG 1 cut(s) 438
BtsCI GGATG 1 cut(s) 285
BtsIMutI CAGTG 5 cut(s) 385, 513, 582, 661, 843
BveI ACCTGC 2 cut(s) 257, 727
Cac8I GCNNGC 1 cut(s) 192
CaiI CAGNNNCTG 1 cut(s) 101
Cfr13I GGNCC 2 cut(s) 188, 233
CspCI CAANNNNNGTGG 4 cut(s) 571, 606, 832, 867
DdeI CTNAG 4 cut(s) 76, 395, 497, 735
DpnI GATC 2 cut(s) 461, 818
DpnII GATC 2 cut(s) 459, 816
DraI TTTAAA 1 cut(s) 297
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
EciI GGCGGA 1 cut(s) 278
Eco57I CTGAAG 1 cut(s) 807
EcoNI CCTNNNNNAGG 1 cut(s) 388
EcoRII CCWGG 1 cut(s) 229
FaiI YATR 1 cut(s) 672
FalI AAGNNNNNCTT 1 cut(s) 868
FauI CCCGC 1 cut(s) 715
FblI GTMKAC 1 cut(s) 618
FokI GGATG 1 cut(s) 272
GsaI CCCAGC 3 cut(s) 134, 152, 170
GsuI CTGGAG 3 cut(s) 213, 647, 867
HaeIII GGCC 3 cut(s) 190, 234, 588
HapII CCGG 1 cut(s) 713
HincII GTYRAC 3 cut(s) 332, 574, 652
HindII GTYRAC 3 cut(s) 332, 574, 652
HindIII AAGCTT 2 cut(s) 8, 877
HinfI GANTC 2 cut(s) 743, 758
HpaI GTTAAC 1 cut(s) 652
HpaII CCGG 1 cut(s) 713
HphI GGTGA 4 cut(s) 238, 349, 686, 696
Hpy166II GTNNAC 5 cut(s) 332, 574, 595, 619, 652
Hpy188I TCNGA 5 cut(s) 459, 625, 757, 763, 816
Hpy188III TCNNGA 2 cut(s) 776, 885
Hpy8I GTNNAC 5 cut(s) 332, 574, 595, 619, 652
HpyAV CCTTC 2 cut(s) 394, 733
HpyCH4III ACNGT 6 cut(s) 329, 361, 380, 616, 656, 702
HpyCH4V TGCA 6 cut(s) 66, 116, 224, 439, 722, 869
HpyF3I CTNAG 4 cut(s) 76, 395, 497, 735
KspAI GTTAAC 1 cut(s) 652
Kzo9I GATC 2 cut(s) 459, 816
LguI GCTCTTC 1 cut(s) 62
LmnI GCTCC 6 cut(s) 91, 115, 142, 666, 688, 715
LweI GCATC 3 cut(s) 25, 205, 700
MaeIII GTNAC 1 cut(s) 702
MalI GATC 2 cut(s) 461, 818
MbiI CCGCTC 1 cut(s) 710
MboI GATC 2 cut(s) 459, 816
MboII GAAGA 3 cut(s) 49, 274, 738
MfeI CAATTG 2 cut(s) 141, 159
MhlI GDGCHC 1 cut(s) 663
MluCI AATT 6 cut(s) 141, 159, 180, 309, 449, 633
MlyI GAGTC 1 cut(s) 752
MnlI CCTC 3 cut(s) 33, 237, 610
MseI TTAA 4 cut(s) 296, 651, 828, 875
MspA1I CMGCKG 4 cut(s) 134, 152, 170, 212
MspI CCGG 1 cut(s) 713
MspR9I CCNGG 1 cut(s) 231
MunI CAATTG 2 cut(s) 141, 159
MvaI CCWGG 1 cut(s) 231
NdeII GATC 2 cut(s) 459, 816
NlaIV GGNNCC 2 cut(s) 613, 717
NmuCI GTSAC 1 cut(s) 702
PaqCI CACCTGC 2 cut(s) 257, 727
PciSI GCTCTTC 1 cut(s) 62
PfeI GAWTC 1 cut(s) 758
PleI GAGTC 1 cut(s) 751
PpsI GAGTC 1 cut(s) 751
PshBI ATTAAT 1 cut(s) 828
Psp6I CCWGG 1 cut(s) 229
PspFI CCCAGC 3 cut(s) 130, 148, 166
PspGI CCWGG 1 cut(s) 229
PspN4I GGNNCC 2 cut(s) 613, 717
PspPI GGNCC 2 cut(s) 188, 233
PstI CTGCAG 2 cut(s) 118, 871
PstNI CAGNNNCTG 1 cut(s) 101
PvuII CAGCTG 4 cut(s) 134, 152, 170, 212
SapI GCTCTTC 1 cut(s) 62
SaqAI TTAA 4 cut(s) 296, 651, 828, 875
Sau3AI GATC 2 cut(s) 459, 816
Sau96I GGNCC 2 cut(s) 188, 233
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 1 cut(s) 231
SduI GDGCHC 1 cut(s) 663
SfaNI GCATC 3 cut(s) 25, 205, 700
SfcI CTRYAG 3 cut(s) 114, 325, 867
SmlI CTYRAG 1 cut(s) 388
SmoI CTYRAG 1 cut(s) 388
Sse9I AATT 6 cut(s) 141, 159, 180, 309, 449, 633
SsiI CCGC 3 cut(s) 93, 289, 708
StyD4I CCNGG 1 cut(s) 229
TaaI ACNGT 6 cut(s) 329, 361, 380, 616, 656, 702
TasI AATT 6 cut(s) 141, 159, 180, 309, 449, 633
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 1 cut(s) 758
Tru1I TTAA 4 cut(s) 296, 651, 828, 875
Tru9I TTAA 4 cut(s) 296, 651, 828, 875
TscAI CASTG 5 cut(s) 385, 513, 589, 661, 850
TseFI GTSAC 1 cut(s) 702
Tsp45I GTSAC 1 cut(s) 702
TspDTI ATGAA 2 cut(s) 274, 738
TspRI CASTG 5 cut(s) 385, 513, 589, 661, 850
VspI ATTAAT 1 cut(s) 828
XagI CCTNNNNNAGG 1 cut(s) 388
XcmI CCANNNNNNNNNTGG 1 cut(s) 524
XmiI GTMKAC 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.