Prupe.6G099200_v2.0.a1

Fasciclin-like arabinogalactan protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6905046 .. 6905918
873 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G099200.1

Sequence Viewer

Length: 873 bp
ATGATGAAGCTTCAGAATCAGCCTCTTTTCTCACTCACACTTACACTCATCTTCCTTTCCCATTGCACCAAAATCATATCCCAAGCTCCTGCTGCTGCTCCGGCTGCTCCTGCCGCCCCAGCTACCCCAGCTGCCCCAATTGCCCCAGCAGCCCCAATTGCCCCAGCTGCCCCATCAATTACAGGGCCAGCAGTTCCAGCACCACCAGCTGATGCCCCTGCACCTGCAGGCCCAACCAACATCACCAAAATCCTTGAAAAAGCAGGTGGCTTCAATGTCTTAATCCGCCTTTTGAAAAGCACCCAAGTAGACAACCAGCTCTACAAACAACTCAACAACTCAAATAGCCAACTCACCGTTTTAGCCCCCACTGACAGTGCCTTCTCAAAGCTCAGCACAGGCTCACTCAACTCTTTGAGCGATGAGCAAAAAGTCCAGCTCTTACAATTCCATCTGATCCCAGATTTTCTCACAATCCAAAACTTCCAAACTCTCAGCAACCCAGTGAGGACCCAAGCTGGAGATGGATTTGAGTATCCTCTAAACATTACCACTTCAGGCAAGGCAGTCAACATATCAACTGGTCTTGTCAACACCTCCATTTCAGGTACTGTCTACTCTGATAGTCAAATTGCTATTTACCAACTTGACAGTGTGCTCCAGCCTTATGGTGTTTTTGCTCCCAAGCATCACCCACCTTCACCAGCACCGGCTCCGGTGCAAGAGAAGCCTAAAAAGACGTCATCATCTGATGACAGTCCTGTTACTGAATTGACGAAGTCTGGTGCTGTGCCTACTCTGATCCCCAAATTTAATGGCATTGTCTCCATTGCAGTTGCTATGGTTGCTGCTGCAGCATTAAGCTTTTGTTGA
Functional Annotation

Protein Analysis

291

Amino Acids

30.09

Weight (kDa)

8.48

Isoelectric Point (pI)

49.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029015)

Species Orthologous Gene IDs
prunus_persica Prupe.6G099200_v2.0.a1 Prupe.6G099300_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 232, 254
AatII GACGTC 1 cut(s) 743
Acc36I ACCTGC 2 cut(s) 232, 254
AccI GTMKAC 2 cut(s) 309, 615
AciI CCGC 2 cut(s) 114, 286
AclWI GGATC 2 cut(s) 451, 796
AcsI RAATTY 1 cut(s) 809
AcuI CTGAAG 1 cut(s) 540
AcyI GRCGYC 1 cut(s) 740
AfaI GTAC 1 cut(s) 610
AgsI TTSAA 3 cut(s) 257, 274, 295
Alw21I GWGCWC 1 cut(s) 660
Alw26I GTCTC 1 cut(s) 829
AlwI GGATC 2 cut(s) 451, 796
AlwNI CAGNNNCTG 1 cut(s) 611
AoxI GGCC 2 cut(s) 185, 229
ApeKI GCWGC 9 cut(s) 92, 95, 104, 131, 149, 167, 848, 851, 854
ApoI RAATTY 1 cut(s) 809
AspS9I GGNCC 3 cut(s) 185, 230, 510
AsuHPI GGTGA 4 cut(s) 235, 346, 683, 693
AvaII GGWCC 1 cut(s) 510
Bbv12I GWGCWC 1 cut(s) 660
BbvI GCAGC 9 cut(s) 79, 82, 91, 118, 154, 161, 835, 838, 866
BccI CCATC 3 cut(s) 181, 459, 518
BciVI GTATCC 1 cut(s) 546
BcoDI GTCTC 1 cut(s) 829
BfmI CTRYAG 2 cut(s) 225, 852
BfuAI ACCTGC 2 cut(s) 232, 254
BfuI GTATCC 1 cut(s) 546
BlpI GCTNAGC 1 cut(s) 392
Bme18I GGWCC 1 cut(s) 510
BmgT120I GGNCC 3 cut(s) 185, 230, 510
BmiI GGNNCC 2 cut(s) 512, 714
BmrI ACTGGG 1 cut(s) 497
BmsI GCATC 2 cut(s) 202, 697
BmuI ACTGGG 1 cut(s) 497
BpmI CTGGAG 2 cut(s) 540, 644
Bpu1102I GCTNAGC 1 cut(s) 392
BsaHI GRCGYC 1 cut(s) 740
BsaWI WCCGGW 1 cut(s) 715
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 2 cut(s) 503, 586
Bse3DI GCAATG 2 cut(s) 61, 828
BseMI GCAATG 2 cut(s) 61, 828
BseMII CTCAG 2 cut(s) 406, 508
BseNI ACTGG 2 cut(s) 503, 586
BseXI GCAGC 9 cut(s) 79, 82, 91, 118, 154, 161, 835, 838, 866
BseYI CCCAGC 4 cut(s) 118, 127, 145, 163
BsgI GTGCAG 1 cut(s) 204
BshFI GGCC 2 cut(s) 187, 231
BsiHKAI GWGCWC 1 cut(s) 660
BsiSI CCGG 3 cut(s) 101, 710, 716
BsmAI GTCTC 1 cut(s) 829
BsnI GGCC 2 cut(s) 187, 231
Bsp1286I GDGCHC 1 cut(s) 660
Bsp143I GATC 2 cut(s) 456, 801
Bsp1720I GCTNAGC 1 cut(s) 392
BspACI CCGC 2 cut(s) 114, 286
BspANI GGCC 2 cut(s) 187, 231
BspCNI CTCAG 2 cut(s) 405, 507
BspLI GGNNCC 2 cut(s) 512, 714
BspMAI CTGCAG 2 cut(s) 229, 856
BspMI ACCTGC 2 cut(s) 232, 254
BspPI GGATC 2 cut(s) 451, 796
BsrDI GCAATG 2 cut(s) 61, 828
BsrFI RCCGGY 1 cut(s) 709
BsrI ACTGG 2 cut(s) 503, 586
BssAI RCCGGY 1 cut(s) 709
BssMI GATC 2 cut(s) 456, 801
BssNI GRCGYC 1 cut(s) 740
Bst4CI ACNGT 5 cut(s) 358, 377, 613, 653, 758
BstACI GRCGYC 1 cut(s) 740
BstC8I GCNNGC 2 cut(s) 189, 229
BstDEI CTNAG 2 cut(s) 392, 494
BstKTI GATC 2 cut(s) 459, 804
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 2 cut(s) 456, 801
BstSFI CTRYAG 2 cut(s) 225, 852
BstV1I GCAGC 9 cut(s) 79, 82, 91, 118, 154, 161, 835, 838, 866
BstXI CCANNNNNNTGG 1 cut(s) 668
BsuI GTATCC 1 cut(s) 546
BsuRI GGCC 2 cut(s) 187, 231
BtgZI GCGATG 1 cut(s) 435
BtsIMutI CAGTG 4 cut(s) 369, 382, 510, 658
BveI ACCTGC 2 cut(s) 232, 254
Cac8I GCNNGC 2 cut(s) 189, 229
CaiI CAGNNNCTG 1 cut(s) 611
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 3 cut(s) 185, 230, 510
Csp6I GTAC 1 cut(s) 609
CviQI GTAC 1 cut(s) 609
DdeI CTNAG 2 cut(s) 392, 494
DpnI GATC 2 cut(s) 458, 803
DpnII GATC 2 cut(s) 456, 801
EciI GGCGGA 1 cut(s) 275
Eco47I GGWCC 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 540
EcoO109I RGGNCCY 1 cut(s) 510
FaiI YATR 4 cut(s) 77, 575, 669, 842
FblI GTMKAC 2 cut(s) 309, 615
GsaI CCCAGC 4 cut(s) 122, 131, 149, 167
GsuI CTGGAG 2 cut(s) 540, 644
HaeIII GGCC 2 cut(s) 187, 231
HapII CCGG 3 cut(s) 101, 710, 716
Hin1I GRCGYC 1 cut(s) 740
HincII GTYRAC 2 cut(s) 571, 592
HindII GTYRAC 2 cut(s) 571, 592
HindIII AAGCTT 2 cut(s) 8, 862
HinfI GANTC 1 cut(s) 16
HpaII CCGG 3 cut(s) 101, 710, 716
HphI GGTGA 4 cut(s) 235, 346, 683, 693
Hpy166II GTNNAC 4 cut(s) 310, 571, 592, 616
Hpy188I TCNGA 5 cut(s) 15, 456, 622, 751, 801
Hpy8I GTNNAC 4 cut(s) 310, 571, 592, 616
HpyAV CCTTC 2 cut(s) 391, 708
HpyCH4III ACNGT 5 cut(s) 358, 377, 613, 653, 758
HpyCH4IV ACGT 1 cut(s) 740
HpyCH4V TGCA 6 cut(s) 66, 221, 227, 721, 833, 854
HpyF3I CTNAG 2 cut(s) 392, 494
HpySE526I ACGT 1 cut(s) 740
Hsp92I GRCGYC 1 cut(s) 740
Kzo9I GATC 2 cut(s) 456, 801
LmnI GCTCC 6 cut(s) 91, 103, 112, 663, 685, 718
Lsp1109I GCAGC 9 cut(s) 79, 82, 91, 118, 154, 161, 835, 838, 866
LweI GCATC 2 cut(s) 202, 697
MaeII ACGT 1 cut(s) 740
MaeIII GTNAC 1 cut(s) 763
MalI GATC 2 cut(s) 458, 803
MboI GATC 2 cut(s) 456, 801
MboII GAAGA 1 cut(s) 43
MfeI CAATTG 2 cut(s) 138, 156
MhlI GDGCHC 1 cut(s) 660
MluCI AATT 7 cut(s) 138, 156, 177, 446, 630, 770, 809
MnlI CCTC 4 cut(s) 33, 501, 549, 607
MseI TTAA 3 cut(s) 281, 813, 860
MspA1I CMGCKG 3 cut(s) 131, 167, 209
MspI CCGG 3 cut(s) 101, 710, 716
MunI CAATTG 2 cut(s) 138, 156
NdeII GATC 2 cut(s) 456, 801
NlaIV GGNNCC 2 cut(s) 512, 714
PaqCI CACCTGC 2 cut(s) 232, 254
PfeI GAWTC 1 cut(s) 16
PflFI GACNNNGTC 1 cut(s) 778
PpuMI RGGWCCY 1 cut(s) 510
Psp5II RGGWCCY 1 cut(s) 510
PspFI CCCAGC 4 cut(s) 118, 127, 145, 163
PspN4I GGNNCC 2 cut(s) 512, 714
PspPI GGNCC 3 cut(s) 185, 230, 510
PspPPI RGGWCCY 1 cut(s) 510
PstI CTGCAG 2 cut(s) 229, 856
PstNI CAGNNNCTG 1 cut(s) 611
PsyI GACNNNGTC 1 cut(s) 778
PvuII CAGCTG 3 cut(s) 131, 167, 209
RsaI GTAC 1 cut(s) 610
RsaNI GTAC 1 cut(s) 609
SaqAI TTAA 3 cut(s) 281, 813, 860
Sau3AI GATC 2 cut(s) 456, 801
Sau96I GGNCC 3 cut(s) 185, 230, 510
SbfI CCTGCAGG 1 cut(s) 229
SdaI CCTGCAGG 1 cut(s) 229
SduI GDGCHC 1 cut(s) 660
SfaNI GCATC 2 cut(s) 202, 697
SfcI CTRYAG 2 cut(s) 225, 852
SinI GGWCC 1 cut(s) 510
Sse8387I CCTGCAGG 1 cut(s) 229
Sse9I AATT 7 cut(s) 138, 156, 177, 446, 630, 770, 809
SsiI CCGC 2 cut(s) 114, 286
TaaI ACNGT 5 cut(s) 358, 377, 613, 653, 758
TaiI ACGT 1 cut(s) 743
TasI AATT 7 cut(s) 138, 156, 177, 446, 630, 770, 809
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 1 cut(s) 16
Tru1I TTAA 3 cut(s) 281, 813, 860
Tru9I TTAA 3 cut(s) 281, 813, 860
TscAI CASTG 4 cut(s) 376, 382, 510, 658
TseI GCWGC 9 cut(s) 92, 95, 104, 131, 149, 167, 848, 851, 854
TspDTI ATGAA 1 cut(s) 20
TspRI CASTG 4 cut(s) 376, 382, 510, 658
Tth111I GACNNNGTC 1 cut(s) 778
VpaK11BI GGWCC 1 cut(s) 510
XapI RAATTY 1 cut(s) 809
XcmI CCANNNNNNNNNTGG 1 cut(s) 521
XmiI GTMKAC 2 cut(s) 309, 615
ZraI GACGTC 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.