Prupe.6G099300_v2.0.a1

Fasciclin-like arabinogalactan protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
6910078 .. 6910941
864 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G099300.1

Sequence Viewer

Length: 864 bp
ATGATGAAGCTTCAGAATCTGCCTCTTTTCTCACTCACACTTACACTCATCTTCCTTTCCCATTGCACCAAAATCATATCCCAAGCTCCTGCTGCTGCTCCGGCTGCTCCTGCAGCCCCAGCTACCCCAATTGCCCCAGCTGCCCCAATTGCCCCAGCTGCTCCAGCAATTACAGGGCCAGCAGTTCCAGCACCACCAGCTGATGCCCCTGCACCTGCAGGCCCAACCAACATCACCAAAATCCTTGAAAAAGCAGGTGGCTTCAATGTCTTAATCCGCCTTTTGAAAAGCACCCAAGTTGACAACCAGCTCTACAGCCAACTCAACAACTCAAATAGCCAACTCACCGTTTTAGCCCCCACTGACAGTGCCTTCTCAAAGCTCAGCACAGGCTCACTCAACTCTTTGAGTGATGAGCAAAAAGTCCAGCTCTTACAATTCCATCTGATCCCAGATTTTCTCACAATCCAAAACTTCCAAACTCTCAGCAACCCAGTGAGGACCCAAGCTGGAGATGGATTTGAGTACCCACTAAACATTACCACATCAGGCAGGGCAGTCAACATATCATCTGGTCTCGTCAACACCTCCATTTCAGGCACTGTCTACTCTGATAGTCAAATTGCTATTTACCAACTTGACAGTGTGCTCCAGCCTTATGGTGTTTTTGCTCCCAAGCATCATCCACCTTCACCGGCACCGTCTCCGGTGCAAGAGAAGCCTAAAAAGACGTCATCATCTGATGACAGTCCTGTTGCTGAATTGACGAAGTCTGGTGCTGTGCCTACTCTGATCCCTAAATTTAATGGCATTGTCTCCATTGCAGTTGCTATGGTTGCTGCTGCAGCATTAAGCTTTTGTTGA
Functional Annotation

Protein Analysis

288

Amino Acids

29.78

Weight (kDa)

7.77

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029015)

Species Orthologous Gene IDs
prunus_persica Prupe.6G099200_v2.0.a1 Prupe.6G099300_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 223, 245
AatII GACGTC 1 cut(s) 734
Acc36I ACCTGC 2 cut(s) 223, 245
AccB1I GGYRCC 1 cut(s) 697
AccI GTMKAC 1 cut(s) 606
AciI CCGC 1 cut(s) 277
AclWI GGATC 2 cut(s) 442, 787
AcsI RAATTY 1 cut(s) 800
AcyI GRCGYC 1 cut(s) 731
AfaI GTAC 1 cut(s) 527
AgsI TTSAA 3 cut(s) 248, 265, 286
Alw21I GWGCWC 1 cut(s) 651
Alw26I GTCTC 3 cut(s) 581, 708, 820
AlwI GGATC 2 cut(s) 442, 787
AlwNI CAGNNNCTG 2 cut(s) 19, 602
AoxI GGCC 2 cut(s) 176, 220
ApeKI GCWGC 9 cut(s) 92, 95, 104, 113, 140, 158, 839, 842, 845
ApoI RAATTY 1 cut(s) 800
AspS9I GGNCC 3 cut(s) 176, 221, 501
AsuHPI GGTGA 3 cut(s) 226, 337, 684
AvaII GGWCC 1 cut(s) 501
BanI GGYRCC 1 cut(s) 697
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 9 cut(s) 79, 82, 91, 125, 127, 145, 826, 829, 857
BccI CCATC 2 cut(s) 450, 509
BcoDI GTCTC 3 cut(s) 581, 708, 820
BfmI CTRYAG 4 cut(s) 111, 216, 313, 843
BfuAI ACCTGC 2 cut(s) 223, 245
BisI GCNGC 9 cut(s) 93, 96, 105, 114, 141, 159, 840, 843, 846
BlpI GCTNAGC 1 cut(s) 383
BlsI GCNGC 9 cut(s) 94, 97, 106, 115, 142, 160, 841, 844, 847
Bme18I GGWCC 1 cut(s) 501
BmgT120I GGNCC 3 cut(s) 176, 221, 501
BmiI GGNNCC 2 cut(s) 503, 699
BmrI ACTGGG 1 cut(s) 488
BmsI GCATC 2 cut(s) 193, 688
BmuI ACTGGG 1 cut(s) 488
BpmI CTGGAG 3 cut(s) 147, 531, 635
Bpu1102I GCTNAGC 1 cut(s) 383
BsaHI GRCGYC 1 cut(s) 731
BsaI GGTCTC 1 cut(s) 581
BsaWI WCCGGW 1 cut(s) 706
Bse118I RCCGGY 1 cut(s) 694
Bse1I ACTGG 1 cut(s) 494
Bse3DI GCAATG 2 cut(s) 61, 819
BseGI GGATG 1 cut(s) 682
BseMI GCAATG 2 cut(s) 61, 819
BseMII CTCAG 2 cut(s) 397, 499
BseNI ACTGG 1 cut(s) 494
BseXI GCAGC 9 cut(s) 79, 82, 91, 125, 127, 145, 826, 829, 857
BseYI CCCAGC 3 cut(s) 118, 136, 154
BsgI GTGCAG 1 cut(s) 195
BshFI GGCC 2 cut(s) 178, 222
BshNI GGYRCC 1 cut(s) 697
BsiHKAI GWGCWC 1 cut(s) 651
BsiSI CCGG 3 cut(s) 101, 695, 707
BsmAI GTCTC 3 cut(s) 581, 708, 820
BsmBI CGTCTC 1 cut(s) 708
BsnI GGCC 2 cut(s) 178, 222
Bso31I GGTCTC 1 cut(s) 581
Bsp1286I GDGCHC 1 cut(s) 651
Bsp143I GATC 2 cut(s) 447, 792
Bsp1720I GCTNAGC 1 cut(s) 383
BspACI CCGC 1 cut(s) 277
BspANI GGCC 2 cut(s) 178, 222
BspCNI CTCAG 2 cut(s) 396, 498
BspLI GGNNCC 2 cut(s) 503, 699
BspMAI CTGCAG 3 cut(s) 115, 220, 847
BspMI ACCTGC 2 cut(s) 223, 245
BspPI GGATC 2 cut(s) 442, 787
BspT107I GGYRCC 1 cut(s) 697
BspTNI GGTCTC 1 cut(s) 581
BsrDI GCAATG 2 cut(s) 61, 819
BsrFI RCCGGY 1 cut(s) 694
BsrI ACTGG 1 cut(s) 494
BssAI RCCGGY 1 cut(s) 694
BssMI GATC 2 cut(s) 447, 792
BssNI GRCGYC 1 cut(s) 731
Bst4CI ACNGT 6 cut(s) 349, 368, 604, 644, 702, 749
BstACI GRCGYC 1 cut(s) 731
BstC8I GCNNGC 2 cut(s) 180, 220
BstDEI CTNAG 2 cut(s) 383, 485
BstF5I GGATG 1 cut(s) 682
BstKTI GATC 2 cut(s) 450, 795
BstMAI GTCTC 3 cut(s) 581, 708, 820
BstMBI GATC 2 cut(s) 447, 792
BstSFI CTRYAG 4 cut(s) 111, 216, 313, 843
BstV1I GCAGC 9 cut(s) 79, 82, 91, 125, 127, 145, 826, 829, 857
BstXI CCANNNNNNTGG 1 cut(s) 659
BsuRI GGCC 2 cut(s) 178, 222
BtsCI GGATG 1 cut(s) 682
BtsIMutI CAGTG 5 cut(s) 360, 373, 501, 600, 649
BveI ACCTGC 2 cut(s) 223, 245
Cac8I GCNNGC 2 cut(s) 180, 220
CaiI CAGNNNCTG 2 cut(s) 19, 602
Cfr10I RCCGGY 1 cut(s) 694
Cfr13I GGNCC 3 cut(s) 176, 221, 501
Csp6I GTAC 1 cut(s) 526
CviQI GTAC 1 cut(s) 526
DdeI CTNAG 2 cut(s) 383, 485
DpnI GATC 2 cut(s) 449, 794
DpnII GATC 2 cut(s) 447, 792
EciI GGCGGA 1 cut(s) 266
Eco31I GGTCTC 1 cut(s) 581
Eco47I GGWCC 1 cut(s) 501
EcoO109I RGGNCCY 1 cut(s) 501
Esp3I CGTCTC 1 cut(s) 708
FaiI YATR 4 cut(s) 77, 566, 660, 833
FblI GTMKAC 1 cut(s) 606
Fnu4HI GCNGC 9 cut(s) 93, 96, 105, 114, 141, 159, 840, 843, 846
FokI GGATG 1 cut(s) 669
Fsp4HI GCNGC 9 cut(s) 93, 96, 105, 114, 141, 159, 840, 843, 846
GluI GCNGC 9 cut(s) 93, 96, 105, 114, 141, 159, 840, 843, 846
GsaI CCCAGC 3 cut(s) 122, 140, 158
GsuI CTGGAG 3 cut(s) 147, 531, 635
HaeIII GGCC 2 cut(s) 178, 222
HapII CCGG 3 cut(s) 101, 695, 707
Hin1I GRCGYC 1 cut(s) 731
HincII GTYRAC 3 cut(s) 301, 562, 583
HindII GTYRAC 3 cut(s) 301, 562, 583
HindIII AAGCTT 2 cut(s) 8, 853
HinfI GANTC 1 cut(s) 16
HpaII CCGG 3 cut(s) 101, 695, 707
HphI GGTGA 3 cut(s) 226, 337, 684
Hpy166II GTNNAC 4 cut(s) 301, 562, 583, 607
Hpy188I TCNGA 5 cut(s) 15, 447, 613, 742, 792
Hpy8I GTNNAC 4 cut(s) 301, 562, 583, 607
HpyAV CCTTC 2 cut(s) 382, 699
HpyCH4III ACNGT 6 cut(s) 349, 368, 604, 644, 702, 749
HpyCH4IV ACGT 1 cut(s) 731
HpyCH4V TGCA 7 cut(s) 66, 113, 212, 218, 712, 824, 845
HpyF3I CTNAG 2 cut(s) 383, 485
HpySE526I ACGT 1 cut(s) 731
Hsp92I GRCGYC 1 cut(s) 731
Kzo9I GATC 2 cut(s) 447, 792
LmnI GCTCC 6 cut(s) 91, 103, 112, 166, 654, 676
Lsp1109I GCAGC 9 cut(s) 79, 82, 91, 125, 127, 145, 826, 829, 857
LweI GCATC 2 cut(s) 193, 688
MaeII ACGT 1 cut(s) 731
MalI GATC 2 cut(s) 449, 794
MboI GATC 2 cut(s) 447, 792
MboII GAAGA 1 cut(s) 43
MfeI CAATTG 2 cut(s) 129, 147
MhlI GDGCHC 1 cut(s) 651
MluCI AATT 7 cut(s) 129, 147, 168, 437, 621, 761, 800
MnlI CCTC 3 cut(s) 33, 492, 598
MseI TTAA 3 cut(s) 272, 804, 851
MspA1I CMGCKG 3 cut(s) 140, 158, 200
MspI CCGG 3 cut(s) 101, 695, 707
MunI CAATTG 2 cut(s) 129, 147
NdeII GATC 2 cut(s) 447, 792
NlaIV GGNNCC 2 cut(s) 503, 699
PaqCI CACCTGC 2 cut(s) 223, 245
PfeI GAWTC 1 cut(s) 16
PflFI GACNNNGTC 1 cut(s) 769
PkrI GCNGC 9 cut(s) 94, 97, 106, 115, 142, 160, 841, 844, 847
PpuMI RGGWCCY 1 cut(s) 501
Psp5II RGGWCCY 1 cut(s) 501
PspFI CCCAGC 3 cut(s) 118, 136, 154
PspN4I GGNNCC 2 cut(s) 503, 699
PspPI GGNCC 3 cut(s) 176, 221, 501
PspPPI RGGWCCY 1 cut(s) 501
PstI CTGCAG 3 cut(s) 115, 220, 847
PstNI CAGNNNCTG 2 cut(s) 19, 602
PsyI GACNNNGTC 1 cut(s) 769
PvuII CAGCTG 3 cut(s) 140, 158, 200
RsaI GTAC 1 cut(s) 527
RsaNI GTAC 1 cut(s) 526
SaqAI TTAA 3 cut(s) 272, 804, 851
SatI GCNGC 9 cut(s) 93, 96, 105, 114, 141, 159, 840, 843, 846
Sau3AI GATC 2 cut(s) 447, 792
Sau96I GGNCC 3 cut(s) 176, 221, 501
SbfI CCTGCAGG 1 cut(s) 220
SdaI CCTGCAGG 1 cut(s) 220
SduI GDGCHC 1 cut(s) 651
SfaNI GCATC 2 cut(s) 193, 688
SfcI CTRYAG 4 cut(s) 111, 216, 313, 843
SinI GGWCC 1 cut(s) 501
Sse8387I CCTGCAGG 1 cut(s) 220
Sse9I AATT 7 cut(s) 129, 147, 168, 437, 621, 761, 800
SsiI CCGC 1 cut(s) 277
TaaI ACNGT 6 cut(s) 349, 368, 604, 644, 702, 749
TaiI ACGT 1 cut(s) 734
TasI AATT 7 cut(s) 129, 147, 168, 437, 621, 761, 800
TfiI GAWTC 1 cut(s) 16
Tru1I TTAA 3 cut(s) 272, 804, 851
Tru9I TTAA 3 cut(s) 272, 804, 851
TscAI CASTG 5 cut(s) 367, 373, 501, 607, 649
TseI GCWGC 9 cut(s) 92, 95, 104, 113, 140, 158, 839, 842, 845
TspDTI ATGAA 1 cut(s) 20
TspRI CASTG 5 cut(s) 367, 373, 501, 607, 649
Tth111I GACNNNGTC 1 cut(s) 769
VpaK11BI GGWCC 1 cut(s) 501
XapI RAATTY 1 cut(s) 800
XcmI CCANNNNNNNNNTGG 1 cut(s) 512
XmiI GTMKAC 1 cut(s) 606
ZraI GACGTC 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.