Prupe.6G120600_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
8964473 .. 8968016
3544 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G120600.1

Sequence Viewer

Length: 1023 bp
ATGGCAGAAGGAGAAACAACGTTAGAGTACACGCCGACATGGGTGGTGGCTGCGTACGTCAAGAAAAAGACCCACAAAAACGTGTTTGAGGCGTTGCATAAGATTAAACAAGGTCCTCCTCCCTCCACTGATATCAAATTGATCGATATTGAATATTTGAAGCTCCATGGACATAGGTATTTATATATCACCGCCGAGTTGGTTTTGGGGATTATAGCAGTGCTGCTGTCGGTGTTTCAAGATCGGTTAGGCAAAATCTGCATAACGGAGAAACAGGCCAGTCATTGGCTGCCTTGTAAGAAACGAGGTCCTCTCTCCAAGGGCGACTGTTCAAAGGGAAAGGTCCCATTGCTAACCGCCACTGCTTGGCAGCATCTTCAGTTGTTCATCTTTGTGGTAGCTACCGTGCATGCGACTTTCTCTATCCTAACCATTCTTTTTGCAAGGGCAAGCATTCGTGAATGGAAACATTGGGAGGATTCTGTCGCAAATGAGTACTATACAGAAGAAGTTCGGAGAAGGCAATCAACACACGCCCGTCTTTGTATCCGGGTTCGTGGTGGAAACAATCCAGCTTTTCTAAGTTGGTTGCTGGCATTTTTCAAGCAATTCTTTGGGTCTGTGACAAAAGCAGATTATAAGATGGTGAGGCTAGGCTTCATTGACGACCATTTATGCAGAGGTTCAAAGTTTAATTTCTACAATTACATGATCCGTGTCCTCGAAGCAGATTTTAAGAGAGTCGTTGGAATAAGTTGGTATCTTTGGTTCTATGTGGTCATCTCCTTGTTGCTGAACATCTGGGGTTGGCATGCCTATTTCTGGATCTCAATTATTCCCCTCATTGTAAGTGTGGGAGCAAATTTCCCCACGAGAATATTCGGTTCGAAAAATTCCCCTTTCTTCTTTACCGCCTCTTTTTCCCTGCAAAATAAAACAAATAAGAGGACCACACCCGAGGGGTGTTGGCCAAAGGCCCTCCGATGCCTAAGTCAGTTCAATCGATCCGTAGAGAAACGATAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

341

Amino Acids

39.39

Weight (kDa)

9.79

Isoelectric Point (pI)

38.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028996)

Species Orthologous Gene IDs
prunus_persica Prupe.6G120600_v2.0.a1 Prupe.6G120700_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 639
AccB7I CCANNNNNTGG 2 cut(s) 285, 366
AciI CCGC 3 cut(s) 192, 357, 912
AclI AACGTT 1 cut(s) 20
AclWI GGATC 3 cut(s) 706, 833, 999
AcoI YGGCCR 1 cut(s) 968
AcsI RAATTY 2 cut(s) 862, 892
AcuI CTGAAG 1 cut(s) 362
AfaI GTAC 3 cut(s) 29, 56, 497
AfiI CCNNNNNNNGG 3 cut(s) 285, 366, 822
AflIII ACRYGT 1 cut(s) 81
AgsI TTSAA 7 cut(s) 152, 160, 239, 333, 604, 687, 1000
AluBI AGCT 3 cut(s) 163, 401, 575
AluI AGCT 3 cut(s) 163, 401, 575
AlwI GGATC 3 cut(s) 706, 833, 999
Ama87I CYCGRG 1 cut(s) 956
AoxI GGCC 3 cut(s) 276, 968, 975
ApeKI GCWGC 4 cut(s) 50, 223, 289, 370
ApoI RAATTY 2 cut(s) 862, 892
Asp700I GAANNNNTTC 1 cut(s) 510
AspS9I GGNCC 5 cut(s) 113, 308, 343, 948, 976
AsuC2I CCSGG 1 cut(s) 551
AsuHPI GGTGA 2 cut(s) 181, 658
AsuII TTCGAA 1 cut(s) 887
AvaI CYCGRG 1 cut(s) 956
AvaII GGWCC 4 cut(s) 113, 308, 343, 948
BalI TGGCCA 1 cut(s) 970
BauI CACGAG 1 cut(s) 871
BbvI GCAGC 4 cut(s) 37, 210, 276, 382
BccI CCATC 1 cut(s) 637
BciVI GTATCC 1 cut(s) 557
BcnI CCSGG 1 cut(s) 551
BfaI CTAG 1 cut(s) 653
BfuI GTATCC 1 cut(s) 557
BisI GCNGC 4 cut(s) 51, 224, 290, 371
BlsI GCNGC 4 cut(s) 52, 225, 291, 372
BmcAI AGTACT 1 cut(s) 497
Bme1390I CCNGG 1 cut(s) 551
Bme18I GGWCC 4 cut(s) 113, 308, 343, 948
BmeT110I CYCGRG 1 cut(s) 956
BmgT120I GGNCC 5 cut(s) 113, 308, 343, 948, 976
BmiI GGNNCC 1 cut(s) 345
BmrFI CCNGG 1 cut(s) 551
BmsI GCATC 2 cut(s) 382, 974
BplI GAGNNNNNCTC 2 cut(s) 297, 329
Bpu14I TTCGAA 1 cut(s) 887
BpuMI CCSGG 1 cut(s) 551
Bsa29I ATCGAT 2 cut(s) 144, 1003
BsaJI CCNNGG 3 cut(s) 166, 318, 957
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 366, 822
Bse1I ACTGG 1 cut(s) 279
Bse3DI GCAATG 1 cut(s) 347
BseCI ATCGAT 2 cut(s) 144, 1003
BseDI CCNNGG 3 cut(s) 166, 318, 957
BseLI CCNNNNNNNGG 3 cut(s) 285, 366, 822
BseMI GCAATG 1 cut(s) 347
BseNI ACTGG 1 cut(s) 279
BseRI GAGGAG 1 cut(s) 108
BseXI GCAGC 4 cut(s) 37, 210, 276, 382
BshFI GGCC 3 cut(s) 278, 970, 977
BshVI ATCGAT 2 cut(s) 144, 1003
BsiHKCI CYCGRG 1 cut(s) 956
BsiSI CCGG 1 cut(s) 550
BsiWI CGTACG 1 cut(s) 54
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 3 cut(s) 285, 366, 822
BsmFI GGGAC 1 cut(s) 329
BsmI GAATGC 1 cut(s) 453
BsnI GGCC 3 cut(s) 278, 970, 977
BsoBI CYCGRG 1 cut(s) 956
Bsp119I TTCGAA 1 cut(s) 887
Bsp143I GATC 5 cut(s) 141, 241, 711, 825, 1004
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 3 cut(s) 192, 357, 912
BspANI GGCC 3 cut(s) 278, 970, 977
BspDI ATCGAT 2 cut(s) 144, 1003
BspLI GGNNCC 1 cut(s) 345
BspPI GGATC 3 cut(s) 706, 833, 999
BspT104I TTCGAA 1 cut(s) 887
BsrDI GCAATG 1 cut(s) 347
BsrI ACTGG 1 cut(s) 279
BssECI CCNNGG 3 cut(s) 166, 318, 957
BssMI GATC 5 cut(s) 141, 241, 711, 825, 1004
BssSI CACGAG 1 cut(s) 871
BssT1I CCWWGG 2 cut(s) 166, 318
Bst2BI CACGAG 1 cut(s) 871
Bst4CI ACNGT 2 cut(s) 329, 406
BstAPI GCANNNNNTGC 1 cut(s) 258
BstBI TTCGAA 1 cut(s) 887
BstC8I GCNNGC 4 cut(s) 411, 451, 594, 813
BstDEI CTNAG 2 cut(s) 581, 989
BstDSI CCRYGG 1 cut(s) 166
BstKTI GATC 5 cut(s) 144, 244, 714, 828, 1007
BstMBI GATC 5 cut(s) 141, 241, 711, 825, 1004
BstMWI GCNNNNNNNGC 1 cut(s) 258
BstNSI RCATGY 2 cut(s) 413, 815
BstSCI CCNGG 1 cut(s) 549
BstV1I GCAGC 4 cut(s) 37, 210, 276, 382
BstX2I RGATCY 1 cut(s) 825
BstYI RGATCY 1 cut(s) 825
Bsu15I ATCGAT 2 cut(s) 144, 1003
BsuI GTATCC 1 cut(s) 557
BsuRI GGCC 3 cut(s) 278, 970, 977
BsuTUI ATCGAT 2 cut(s) 144, 1003
BtgI CCRYGG 1 cut(s) 166
BtsI GCAGTG 2 cut(s) 225, 360
BtsIMutI CAGTG 3 cut(s) 126, 225, 360
Cac8I GCNNGC 4 cut(s) 411, 451, 594, 813
Cfr13I GGNCC 5 cut(s) 113, 308, 343, 948, 976
ClaI ATCGAT 2 cut(s) 144, 1003
Csp6I GTAC 3 cut(s) 28, 55, 496
CviAII CATG 5 cut(s) 39, 167, 410, 709, 812
CviQI GTAC 3 cut(s) 28, 55, 496
DdeI CTNAG 2 cut(s) 581, 989
DpnI GATC 5 cut(s) 143, 243, 713, 827, 1006
DpnII GATC 5 cut(s) 141, 241, 711, 825, 1004
EaeI YGGCCR 1 cut(s) 968
Eco130I CCWWGG 2 cut(s) 166, 318
Eco32I GATATC 1 cut(s) 133
Eco47I GGWCC 4 cut(s) 113, 308, 343, 948
Eco57I CTGAAG 1 cut(s) 362
Eco88I CYCGRG 1 cut(s) 956
EcoO109I RGGNCCY 4 cut(s) 113, 308, 343, 976
EcoRV GATATC 1 cut(s) 133
EcoT14I CCWWGG 2 cut(s) 166, 318
ErhI CCWWGG 2 cut(s) 166, 318
FaeI CATG 5 cut(s) 42, 170, 413, 712, 815
FalI AAGNNNNNCTT 2 cut(s) 596, 628
FaqI GGGAC 1 cut(s) 329
FatI CATG 5 cut(s) 38, 166, 409, 708, 811
Fnu4HI GCNGC 4 cut(s) 51, 224, 290, 371
Fsp4HI GCNGC 4 cut(s) 51, 224, 290, 371
FspBI CTAG 1 cut(s) 653
GluI GCNGC 4 cut(s) 51, 224, 290, 371
HaeIII GGCC 3 cut(s) 278, 970, 977
HapII CCGG 1 cut(s) 550
Hin1II CATG 5 cut(s) 42, 170, 413, 712, 815
HinfI GANTC 2 cut(s) 479, 741
HpaII CCGG 1 cut(s) 550
HphI GGTGA 2 cut(s) 181, 658
Hpy166II GTNNAC 1 cut(s) 30
Hpy188I TCNGA 2 cut(s) 516, 983
Hpy188III TCNNGA 4 cut(s) 61, 239, 458, 823
Hpy8I GTNNAC 1 cut(s) 30
HpyAV CCTTC 1 cut(s) 513
HpyCH4III ACNGT 2 cut(s) 329, 406
HpyCH4IV ACGT 3 cut(s) 20, 57, 81
HpyCH4V TGCA 6 cut(s) 97, 261, 409, 443, 678, 928
HpyF10VI GCNNNNNNNGC 1 cut(s) 258
HpyF3I CTNAG 2 cut(s) 581, 989
HpySE526I ACGT 3 cut(s) 20, 57, 81
Hsp92II CATG 5 cut(s) 42, 170, 413, 712, 815
Kzo9I GATC 5 cut(s) 141, 241, 711, 825, 1004
LmnI GCTCC 2 cut(s) 168, 857
LpnPI CCDG 8 cut(s) 260, 292, 563, 578, 585, 787, 808, 938
Lsp1109I GCAGC 4 cut(s) 37, 210, 276, 382
LweI GCATC 2 cut(s) 382, 974
MaeI CTAG 1 cut(s) 653
MaeII ACGT 3 cut(s) 20, 57, 81
MaeIII GTNAC 1 cut(s) 622
MalI GATC 5 cut(s) 143, 243, 713, 827, 1006
MboI GATC 5 cut(s) 141, 241, 711, 825, 1004
MboII GAAGA 3 cut(s) 368, 518, 895
MflI RGATCY 1 cut(s) 825
MlsI TGGCCA 1 cut(s) 970
MluCI AATT 7 cut(s) 137, 608, 694, 703, 831, 862, 892
MluNI TGGCCA 1 cut(s) 970
MlyI GAGTC 1 cut(s) 750
MmeI TCCRAC 1 cut(s) 727
Mox20I TGGCCA 1 cut(s) 970
MroXI GAANNNNTTC 1 cut(s) 510
MscI TGGCCA 1 cut(s) 970
MseI TTAA 3 cut(s) 105, 693, 735
MslI CAYNNNNRTG 1 cut(s) 392
Msp20I TGGCCA 1 cut(s) 970
MspI CCGG 1 cut(s) 550
MspR9I CCNGG 1 cut(s) 551
Mva1269I GAATGC 1 cut(s) 453
MwoI GCNNNNNNNGC 1 cut(s) 258
NciI CCSGG 1 cut(s) 551
NcoI CCATGG 1 cut(s) 166
NdeII GATC 5 cut(s) 141, 241, 711, 825, 1004
NlaIII CATG 5 cut(s) 42, 170, 413, 712, 815
NlaIV GGNNCC 1 cut(s) 345
NmeAIII GCCGAG 1 cut(s) 220
NmuCI GTSAC 1 cut(s) 622
NspI RCATGY 2 cut(s) 413, 815
NspV TTCGAA 1 cut(s) 887
PaeI GCATGC 2 cut(s) 413, 815
PctI GAATGC 1 cut(s) 453
PdmI GAANNNNTTC 1 cut(s) 510
PfeI GAWTC 1 cut(s) 479
Pfl23II CGTACG 1 cut(s) 54
PflMI CCANNNNNTGG 2 cut(s) 285, 366
PkrI GCNGC 4 cut(s) 52, 225, 291, 372
PleI GAGTC 1 cut(s) 749
PpsI GAGTC 1 cut(s) 749
PpuMI RGGWCCY 3 cut(s) 113, 308, 343
PsiI TTATAA 1 cut(s) 639
Psp1406I AACGTT 1 cut(s) 20
Psp5II RGGWCCY 3 cut(s) 113, 308, 343
PspLI CGTACG 1 cut(s) 54
PspN4I GGNNCC 1 cut(s) 345
PspPI GGNCC 5 cut(s) 113, 308, 343, 948, 976
PspPPI RGGWCCY 3 cut(s) 113, 308, 343
PsrI GAACNNNNNNTAC 2 cut(s) 752, 784
PsuI RGATCY 1 cut(s) 825
RsaI GTAC 3 cut(s) 29, 56, 497
RsaNI GTAC 3 cut(s) 28, 55, 496
RseI CAYNNNNRTG 1 cut(s) 392
SaqAI TTAA 3 cut(s) 105, 693, 735
SatI GCNGC 4 cut(s) 51, 224, 290, 371
Sau3AI GATC 5 cut(s) 141, 241, 711, 825, 1004
Sau96I GGNCC 5 cut(s) 113, 308, 343, 948, 976
ScaI AGTACT 1 cut(s) 497
SchI GAGTC 1 cut(s) 750
ScrFI CCNGG 1 cut(s) 551
SfaNI GCATC 2 cut(s) 382, 974
SfuI TTCGAA 1 cut(s) 887
SinI GGWCC 4 cut(s) 113, 308, 343, 948
SmiMI CAYNNNNRTG 1 cut(s) 392
SphI GCATGC 2 cut(s) 413, 815
Sse9I AATT 7 cut(s) 137, 608, 694, 703, 831, 862, 892
SsiI CCGC 3 cut(s) 192, 357, 912
SspI AATATT 2 cut(s) 155, 879
SspMI CTAG 1 cut(s) 653
StyD4I CCNGG 1 cut(s) 549
StyI CCWWGG 2 cut(s) 166, 318
TaaI ACNGT 2 cut(s) 329, 406
TaiI ACGT 3 cut(s) 23, 60, 84
TaqI TCGA 4 cut(s) 144, 723, 887, 1003
TasI AATT 7 cut(s) 137, 608, 694, 703, 831, 862, 892
TatI WGTACW 2 cut(s) 27, 495
TfiI GAWTC 1 cut(s) 479
Tru1I TTAA 3 cut(s) 105, 693, 735
Tru9I TTAA 3 cut(s) 105, 693, 735
TscAI CASTG 3 cut(s) 133, 225, 367
TseFI GTSAC 1 cut(s) 622
TseI GCWGC 4 cut(s) 50, 223, 289, 370
Tsp45I GTSAC 1 cut(s) 622
TspDTI ATGAA 2 cut(s) 376, 649
TspGWI ACGGA 3 cut(s) 281, 704, 997
TspRI CASTG 3 cut(s) 133, 225, 367
Van91I CCANNNNNTGG 2 cut(s) 285, 366
VpaK11BI GGWCC 4 cut(s) 113, 308, 343, 948
XapI RAATTY 2 cut(s) 862, 892
XceI RCATGY 2 cut(s) 413, 815
XmnI GAANNNNTTC 1 cut(s) 510
XspI CTAG 1 cut(s) 653
ZrmI AGTACT 1 cut(s) 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.