Prupe.6G120700_v2.0.a1

May be involved in modulation of pathogen defense and leaf cell death

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0028996
Physical Location & Seq
Reverse (-)
8968215 .. 8974540
6326 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G120700.1

Sequence Viewer

Length: 1392 bp
ATGGCGTCGGGAGAAACAACCTTGGAGTACACGCCGACATGGGTGGTGGCTGCGGTGTGCAGTGTCGTAATGCTCATCTCTCTAGCGGTCGAGAGAGTCCTTTACTACACTGACAAGTATCTCAAGAAAAAGACCCAGAAACCTGTCTTTGAGGCCTTGCAGAAGATCAAACAAGAATTGCTTTTGGGGCTTATAGCACTGCTGCTGACGACGTTCCAAGACCGTTTAGGAAAAATCTGCATAACGGAGAAACAGGCCAGCCAATGGCTGCCTTGTAAGAAACAAGACATGAGTACTAGTACTACTGCTCCTCGCTACTGTTCAGAGGGGAAGGTCCCATTGTTATCCGCCGTTGCATGGCATCATCTTCATATCTTCATCTTTGTGCTAGCTGCGGTGCATGCAACTTTCTGTGTGCTAACCATTCTTTTTGCAAAGGCAAAGATGAGTCAATGGAAACATTGGGAGGATTCTATCAAAAGGGATTACCATCCAGAAGAAGTTTTGAAAAGGAAGGTCATTGCCGTCCGTGATCATGTTTTTGTCAGGAGTCGCGTTCTGGGTTTTGGAAGGAACTCAGATTTCATAGGTTGGTTGTTTGCATTTTTGAAACAATTTTATGGGTCTGTGAGCAAAGAAGATTATTTGACAATGCGACAGGGCTTCGTTCAGACCCATTGCAGGGGAAATCCGAAATTTAATTTCCACAAGTATATGATACGTGCCCTTGCAGCAGATTTTAAGAGTGTAGTAGGAATAAGCTGGTATCTTTGGATCTTTGTGGTCATCTTCTTGTTGCTGAATGTCTGGGGTTGGCATTCCTATTTTTGGATAGCTTTCATTCCCTTAATTCTATTACTTGCTGTTGGCACTAAGTTGGAGCATGTTATTACTCAATTGGCCAATGAGGTTGCTGAGAAGCACGTTGCAATCGAAGGGGACTTGGTTGTTCAACCTTCAGATAATCAGTTTTGGTTCCACAGGCCCAGACTGATTCTCTTCCTGATACATATCATCTTGTTCCAAAATTCTTTTCAACTGGCATATTTCTTCTGGTTATGGTATCAATATTCATTTGATTCCTGCATAATGGGGAAAGTCGCTTATATTATCCCAAGACTCATTATTGGAGCATTCATTCAGTTCGTCTGCAGTTACAGTACCTTCCCGTTGTATGCAATCGTCACACAGATGGGAAGTTCATTCAAGAAGGCCATATTTGAAGAACATATACAAGAGGGCCTTATTGGATGGGCTCGGTCAGCGAAAAGGAACAAGCCGTTGAGACGTGTAGATCCCAAAGAGGCTTGTGCGACAGTTAATGAGTCGTCAGTGGAAGTTGGCACCACAGGAGAAATTGAGCCTGAACCGCCACTGAGGTCACCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

464

Amino Acids

53.47

Weight (kDa)

9.29

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028996)

Species Orthologous Gene IDs
prunus_persica Prupe.6G120600_v2.0.a1 Prupe.6G120700_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1343
AccB7I CCANNNNNTGG 1 cut(s) 264
AccII CGCG 1 cut(s) 555
AciI CCGC 5 cut(s) 53, 86, 348, 395, 1370
AclWI GGATC 2 cut(s) 782, 1289
AcoI YGGCCR 1 cut(s) 900
AcsI RAATTY 2 cut(s) 695, 1027
AcuI CTGAAG 1 cut(s) 942
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 29, 295, 301, 1162
AfiI CCNNNNNNNGG 5 cut(s) 264, 357, 681, 682, 828
AflIII ACRYGT 1 cut(s) 1288
AgsI TTSAA 6 cut(s) 508, 610, 953, 1037, 1207, 1223
AhlI ACTAGT 1 cut(s) 296
AjiI CACGTC 1 cut(s) 1289
AjuI GAANNNNNNNTTGG 2 cut(s) 1017, 1049
AluBI AGCT 3 cut(s) 392, 762, 836
AluI AGCT 3 cut(s) 392, 762, 836
Alw26I GTCTC 1 cut(s) 1279
AlwI GGATC 2 cut(s) 782, 1289
AoxI GGCC 6 cut(s) 153, 255, 900, 983, 1212, 1240
ApeKI GCWGC 5 cut(s) 50, 202, 268, 392, 731
ApoI RAATTY 2 cut(s) 695, 1027
AspS9I GGNCC 3 cut(s) 334, 984, 1240
AsuHPI GGTGA 1 cut(s) 1374
AsuNHI GCTAGC 1 cut(s) 388
AvaII GGWCC 1 cut(s) 334
BaeGI GKGCMC 1 cut(s) 727
BalI TGGCCA 1 cut(s) 902
BanI GGYRCC 1 cut(s) 1343
BanII GRGCYC 1 cut(s) 1258
BarI GAAGNNNNNNTAC 2 cut(s) 1215, 1247
BbvI GCAGC 5 cut(s) 37, 189, 255, 379, 743
BccI CCATC 3 cut(s) 498, 1186, 1245
BceAI ACGGC 3 cut(s) 335, 509, 1264
BclI TGATCA 1 cut(s) 532
BcoDI GTCTC 1 cut(s) 1279
BcuI ACTAGT 1 cut(s) 296
BfaI CTAG 3 cut(s) 83, 297, 389
BfmI CTRYAG 1 cut(s) 1150
BisI GCNGC 5 cut(s) 51, 203, 269, 393, 732
BlsI GCNGC 5 cut(s) 52, 204, 270, 394, 733
BmcAI AGTACT 2 cut(s) 295, 301
Bme18I GGWCC 1 cut(s) 334
BmgBI CACGTC 1 cut(s) 1289
BmgT120I GGNCC 3 cut(s) 334, 984, 1240
BmiI GGNNCC 3 cut(s) 336, 977, 1345
BmsI GCATC 1 cut(s) 370
BmtI GCTAGC 1 cut(s) 392
BpuEI CTTGAG 1 cut(s) 107
BsaAI YACGTR 1 cut(s) 722
BsaBI GATNNNNATC 2 cut(s) 489, 1010
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 1 cut(s) 21
BsaXI ACNNNNNCTCC 2 cut(s) 292, 322
Bsc4I CCNNNNNNNGG 5 cut(s) 264, 357, 681, 682, 828
Bse1I ACTGG 1 cut(s) 1044
Bse3DI GCAATG 2 cut(s) 519, 676
Bse8I GATNNNNATC 2 cut(s) 489, 1010
BseDI CCNNGG 1 cut(s) 21
BseGI GGATG 2 cut(s) 490, 1256
BseJI GATNNNNATC 2 cut(s) 489, 1010
BseLI CCNNNNNNNGG 5 cut(s) 264, 357, 681, 682, 828
BseMI GCAATG 2 cut(s) 519, 676
BseMII CTCAG 3 cut(s) 591, 906, 1367
BseNI ACTGG 1 cut(s) 1044
BseRI GAGGAG 1 cut(s) 300
BseSI GKGCMC 1 cut(s) 727
BseXI GCAGC 5 cut(s) 37, 189, 255, 379, 743
BsgI GTGCAG 1 cut(s) 79
Bsh1236I CGCG 1 cut(s) 555
Bsh1285I CGRYCG 1 cut(s) 90
BshFI GGCC 6 cut(s) 155, 257, 902, 985, 1214, 1242
BshNI GGYRCC 1 cut(s) 1343
BsiEI CGRYCG 1 cut(s) 90
BslFI GGGAC 2 cut(s) 320, 953
BslI CCNNNNNNNGG 5 cut(s) 264, 357, 681, 682, 828
BsmAI GTCTC 1 cut(s) 1279
BsmBI CGTCTC 1 cut(s) 1279
BsmFI GGGAC 2 cut(s) 320, 953
BsmI GAATGC 2 cut(s) 817, 1133
BsnI GGCC 6 cut(s) 155, 257, 902, 985, 1214, 1242
Bsp1286I GDGCHC 2 cut(s) 727, 1258
Bsp143I GATC 4 cut(s) 165, 532, 774, 1294
BspACI CCGC 5 cut(s) 53, 86, 348, 395, 1370
BspANI GGCC 6 cut(s) 155, 257, 902, 985, 1214, 1242
BspCNI CTCAG 3 cut(s) 590, 907, 1368
BspFNI CGCG 1 cut(s) 555
BspLI GGNNCC 3 cut(s) 336, 977, 1345
BspMAI CTGCAG 1 cut(s) 1154
BspOI GCTAGC 1 cut(s) 392
BspPI GGATC 2 cut(s) 782, 1289
BspT107I GGYRCC 1 cut(s) 1343
BsrDI GCAATG 2 cut(s) 519, 676
BsrI ACTGG 1 cut(s) 1044
BssECI CCNNGG 1 cut(s) 21
BssMI GATC 4 cut(s) 165, 532, 774, 1294
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 21
Bst4CI ACNGT 4 cut(s) 224, 320, 1160, 1318
Bst6I CTCTTC 1 cut(s) 1004
BstACI GRCGYC 1 cut(s) 5
BstBAI YACGTR 1 cut(s) 722
BstC8I GCNNGC 3 cut(s) 259, 390, 402
BstDEI CTNAG 4 cut(s) 577, 873, 915, 1376
BstEII GGTNACC 1 cut(s) 1380
BstF5I GGATG 2 cut(s) 490, 1256
BstFNI CGCG 1 cut(s) 555
BstKTI GATC 4 cut(s) 168, 535, 777, 1297
BstMAI GTCTC 1 cut(s) 1279
BstMBI GATC 4 cut(s) 165, 532, 774, 1294
BstMCI CGRYCG 1 cut(s) 90
BstMWI GCNNNNNNNGC 5 cut(s) 187, 401, 731, 1262, 1369
BstNSI RCATGY 2 cut(s) 404, 887
BstPI GGTNACC 1 cut(s) 1380
BstSFI CTRYAG 1 cut(s) 1150
BstSLI GKGCMC 1 cut(s) 727
BstUI CGCG 1 cut(s) 555
BstV1I GCAGC 5 cut(s) 37, 189, 255, 379, 743
BstX2I RGATCY 2 cut(s) 774, 1294
BstYI RGATCY 2 cut(s) 774, 1294
BsuRI GGCC 6 cut(s) 155, 257, 902, 985, 1214, 1242
BtrI CACGTC 1 cut(s) 1289
BtsCI GGATG 2 cut(s) 490, 1256
BtsI GCAGTG 2 cut(s) 67, 197
BtsIMutI CAGTG 5 cut(s) 67, 108, 197, 1338, 1373
Cac8I GCNNGC 3 cut(s) 259, 390, 402
Cfr13I GGNCC 3 cut(s) 334, 984, 1240
Csp6I GTAC 4 cut(s) 28, 294, 300, 1161
CviAII CATG 6 cut(s) 39, 289, 357, 401, 536, 884
CviQI GTAC 4 cut(s) 28, 294, 300, 1161
DdeI CTNAG 4 cut(s) 577, 873, 915, 1376
DpnI GATC 4 cut(s) 167, 534, 776, 1296
DpnII GATC 4 cut(s) 165, 532, 774, 1294
EaeI YGGCCR 1 cut(s) 900
Eam1104I CTCTTC 1 cut(s) 1004
EarI CTCTTC 1 cut(s) 1004
EciI GGCGGA 1 cut(s) 337
Eco130I CCWWGG 1 cut(s) 21
Eco147I AGGCCT 1 cut(s) 155
Eco24I GRGCYC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 334
Eco57I CTGAAG 1 cut(s) 942
Eco91I GGTNACC 1 cut(s) 1380
EcoO109I RGGNCCY 2 cut(s) 334, 1240
EcoO65I GGTNACC 1 cut(s) 1380
EcoT14I CCWWGG 1 cut(s) 21
EcoT38I GRGCYC 1 cut(s) 1258
ErhI CCWWGG 1 cut(s) 21
Esp3I CGTCTC 1 cut(s) 1279
FaeI CATG 6 cut(s) 42, 292, 360, 404, 539, 887
FalI AAGNNNNNCTT 4 cut(s) 165, 197, 1227, 1259
FaqI GGGAC 2 cut(s) 320, 953
FatI CATG 6 cut(s) 38, 288, 356, 400, 535, 883
FbaI TGATCA 1 cut(s) 532
Fnu4HI GCNGC 5 cut(s) 51, 203, 269, 393, 732
FokI GGATG 2 cut(s) 477, 1263
FriOI GRGCYC 1 cut(s) 1258
Fsp4HI GCNGC 5 cut(s) 51, 203, 269, 393, 732
FspBI CTAG 3 cut(s) 83, 297, 389
GluI GCNGC 5 cut(s) 51, 203, 269, 393, 732
HaeIII GGCC 6 cut(s) 155, 257, 902, 985, 1214, 1242
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 42, 292, 360, 404, 539, 887
HinfI GANTC 8 cut(s) 96, 448, 470, 550, 994, 1079, 1119, 1325
HphI GGTGA 1 cut(s) 1374
Hpy166II GTNNAC 1 cut(s) 30
Hpy188I TCNGA 5 cut(s) 325, 580, 672, 693, 961
Hpy188III TCNNGA 7 cut(s) 9, 91, 124, 494, 547, 1003, 1207
Hpy8I GTNNAC 1 cut(s) 30
Hpy99I CGWCG 2 cut(s) 10, 214
HpyAV CCTTC 7 cut(s) 325, 508, 564, 929, 966, 1174, 1204
HpyCH4III ACNGT 4 cut(s) 224, 320, 1160, 1318
HpyCH4IV ACGT 4 cut(s) 212, 721, 924, 1288
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 401, 731, 1262, 1369
HpyF3I CTNAG 4 cut(s) 577, 873, 915, 1376
HpySE526I ACGT 4 cut(s) 212, 721, 924, 1288
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 42, 292, 360, 404, 539, 887
Ksp22I TGATCA 1 cut(s) 532
Kzo9I GATC 4 cut(s) 165, 532, 774, 1294
LmnI GCTCC 3 cut(s) 313, 880, 1130
Lsp1109I GCAGC 5 cut(s) 37, 189, 255, 379, 743
LweI GCATC 1 cut(s) 370
MaeI CTAG 3 cut(s) 83, 297, 389
MaeII ACGT 4 cut(s) 212, 721, 924, 1288
MaeIII GTNAC 3 cut(s) 1154, 1183, 1380
MalI GATC 4 cut(s) 167, 534, 776, 1296
MboI GATC 4 cut(s) 165, 532, 774, 1294
MboII GAAGA 9 cut(s) 175, 359, 367, 509, 650, 781, 991, 1042, 1235
MfeI CAATTG 1 cut(s) 896
MflI RGATCY 2 cut(s) 774, 1294
MhlI GDGCHC 2 cut(s) 727, 1258
MlsI TGGCCA 1 cut(s) 902
MluCI AATT 8 cut(s) 176, 614, 695, 700, 849, 896, 1027, 1356
MluNI TGGCCA 1 cut(s) 902
MlyI GAGTC 5 cut(s) 105, 457, 559, 1113, 1334
MmeI TCCRAC 1 cut(s) 858
MnlI CCTC 8 cut(s) 145, 319, 321, 460, 901, 1231, 1297, 1371
Mox20I TGGCCA 1 cut(s) 902
MscI TGGCCA 1 cut(s) 902
MseI TTAA 4 cut(s) 699, 741, 848, 1320
MslI CAYNNNNRTG 3 cut(s) 383, 1190, 1387
Msp20I TGGCCA 1 cut(s) 902
MunI CAATTG 1 cut(s) 896
Mva1269I GAATGC 2 cut(s) 817, 1133
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 5 cut(s) 187, 401, 731, 1262, 1369
NdeII GATC 4 cut(s) 165, 532, 774, 1294
NheI GCTAGC 1 cut(s) 388
NlaIII CATG 6 cut(s) 42, 292, 360, 404, 539, 887
NlaIV GGNNCC 3 cut(s) 336, 977, 1345
NmuCI GTSAC 2 cut(s) 1183, 1380
NspI RCATGY 2 cut(s) 404, 887
PaeI GCATGC 1 cut(s) 404
PceI AGGCCT 1 cut(s) 155
PcsI WCGNNNNNNNCGW 1 cut(s) 930
PctI GAATGC 2 cut(s) 817, 1133
PfeI GAWTC 3 cut(s) 470, 994, 1079
PflMI CCANNNNNTGG 1 cut(s) 264
PkrI GCNGC 5 cut(s) 52, 204, 270, 394, 733
PleI GAGTC 5 cut(s) 104, 456, 558, 1113, 1333
PpsI GAGTC 5 cut(s) 104, 456, 558, 1113, 1333
Ppu21I YACGTR 1 cut(s) 722
PpuMI RGGWCCY 1 cut(s) 334
Psp5II RGGWCCY 1 cut(s) 334
PspEI GGTNACC 1 cut(s) 1380
PspN4I GGNNCC 3 cut(s) 336, 977, 1345
PspPI GGNCC 3 cut(s) 334, 984, 1240
PspPPI RGGWCCY 1 cut(s) 334
PstI CTGCAG 1 cut(s) 1154
PsuI RGATCY 2 cut(s) 774, 1294
RsaI GTAC 4 cut(s) 29, 295, 301, 1162
RsaNI GTAC 4 cut(s) 28, 294, 300, 1161
RseI CAYNNNNRTG 3 cut(s) 383, 1190, 1387
SaqAI TTAA 4 cut(s) 699, 741, 848, 1320
SatI GCNGC 5 cut(s) 51, 203, 269, 393, 732
Sau3AI GATC 4 cut(s) 165, 532, 774, 1294
Sau96I GGNCC 3 cut(s) 334, 984, 1240
ScaI AGTACT 2 cut(s) 295, 301
SchI GAGTC 5 cut(s) 105, 457, 559, 1113, 1334
SduI GDGCHC 2 cut(s) 727, 1258
SfaNI GCATC 1 cut(s) 370
SfcI CTRYAG 1 cut(s) 1150
SinI GGWCC 1 cut(s) 334
SmiMI CAYNNNNRTG 3 cut(s) 383, 1190, 1387
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SpeI ACTAGT 1 cut(s) 296
SphI GCATGC 1 cut(s) 404
Sse9I AATT 8 cut(s) 176, 614, 695, 700, 849, 896, 1027, 1356
SseBI AGGCCT 1 cut(s) 155
SsiI CCGC 5 cut(s) 53, 86, 348, 395, 1370
SspI AATATT 1 cut(s) 1070
SspMI CTAG 3 cut(s) 83, 297, 389
StuI AGGCCT 1 cut(s) 155
StyI CCWWGG 1 cut(s) 21
TaaI ACNGT 4 cut(s) 224, 320, 1160, 1318
TaiI ACGT 4 cut(s) 215, 724, 927, 1291
TaqI TCGA 2 cut(s) 90, 933
TaqII GACCGA 1 cut(s) 1248
TasI AATT 8 cut(s) 176, 614, 695, 700, 849, 896, 1027, 1356
TatI WGTACW 3 cut(s) 27, 293, 299
TfiI GAWTC 3 cut(s) 470, 994, 1079
Tru1I TTAA 4 cut(s) 699, 741, 848, 1320
Tru9I TTAA 4 cut(s) 699, 741, 848, 1320
TscAI CASTG 5 cut(s) 67, 115, 204, 1338, 1380
TseFI GTSAC 2 cut(s) 1183, 1380
TseI GCWGC 5 cut(s) 50, 202, 268, 392, 731
Tsp45I GTSAC 2 cut(s) 1183, 1380
TspDTI ATGAA 7 cut(s) 359, 367, 574, 829, 1062, 1126, 1191
TspGWI ACGGA 2 cut(s) 260, 518
TspRI CASTG 5 cut(s) 67, 115, 204, 1338, 1380
Van91I CCANNNNNTGG 1 cut(s) 264
VpaK11BI GGWCC 1 cut(s) 334
XapI RAATTY 2 cut(s) 695, 1027
XceI RCATGY 2 cut(s) 404, 887
XspI CTAG 3 cut(s) 83, 297, 389
ZrmI AGTACT 2 cut(s) 295, 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.