Cold-inducible RNA-binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G27330 |
| malus_domestica | MD03G1149700.v1.1 |
| prunus_persica | Prupe.6G135700_v2.0.a1 Prupe.6G135700_v2.0.a1 Prupe.6G135700_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 315 |
| AciI | CCGC | 1 cut(s) | 5 |
| AclWI | GGATC | 1 cut(s) | 315 |
| AcoI | YGGCCR | 1 cut(s) | 338 |
| AflIII | ACRYGT | 1 cut(s) | 313 |
| AjnI | CCWGG | 1 cut(s) | 92 |
| AluBI | AGCT | 2 cut(s) | 33, 112 |
| AluI | AGCT | 2 cut(s) | 33, 112 |
| Alw26I | GTCTC | 1 cut(s) | 248 |
| AlwI | GGATC | 1 cut(s) | 315 |
| AoxI | GGCC | 2 cut(s) | 338, 354 |
| AsuHPI | GGTGA | 2 cut(s) | 127, 295 |
| BalI | TGGCCA | 1 cut(s) | 340 |
| BccI | CCATC | 1 cut(s) | 295 |
| BciT130I | CCWGG | 1 cut(s) | 94 |
| BcoDI | GTCTC | 1 cut(s) | 248 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 275 |
| BisI | GCNGC | 1 cut(s) | 6 |
| BlsI | GCNGC | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 1 cut(s) | 94 |
| BmrFI | CCNGG | 1 cut(s) | 94 |
| BmsI | GCATC | 3 cut(s) | 17, 181, 256 |
| BpmI | CTGGAG | 2 cut(s) | 57, 76 |
| BpuEI | CTTGAG | 1 cut(s) | 144 |
| BsaJI | CCNNGG | 1 cut(s) | 93 |
| BseBI | CCWGG | 1 cut(s) | 94 |
| BseDI | CCNNGG | 1 cut(s) | 93 |
| BseGI | GGATG | 2 cut(s) | 52, 271 |
| BseMII | CTCAG | 1 cut(s) | 29 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| Bsh1236I | CGCG | 1 cut(s) | 315 |
| BshFI | GGCC | 2 cut(s) | 340, 356 |
| BsmAI | GTCTC | 1 cut(s) | 248 |
| BsnI | GGCC | 2 cut(s) | 340, 356 |
| Bsp143I | GATC | 1 cut(s) | 307 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 2 cut(s) | 340, 356 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspFNI | CGCG | 1 cut(s) | 315 |
| BspPI | GGATC | 1 cut(s) | 315 |
| BssECI | CCNNGG | 1 cut(s) | 93 |
| BssMI | GATC | 1 cut(s) | 307 |
| Bst2UI | CCWGG | 1 cut(s) | 94 |
| Bst6I | CTCTTC | 2 cut(s) | 92, 141 |
| BstDEI | CTNAG | 1 cut(s) | 38 |
| BstF5I | GGATG | 2 cut(s) | 52, 271 |
| BstFNI | CGCG | 1 cut(s) | 315 |
| BstKTI | GATC | 1 cut(s) | 310 |
| BstMAI | GTCTC | 1 cut(s) | 248 |
| BstMBI | GATC | 1 cut(s) | 307 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 275 |
| BstNI | CCWGG | 1 cut(s) | 94 |
| BstSCI | CCNGG | 1 cut(s) | 92 |
| BstUI | CGCG | 1 cut(s) | 315 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 115 |
| BsuRI | GGCC | 2 cut(s) | 340, 356 |
| BtsCI | GGATG | 2 cut(s) | 52, 271 |
| CviAII | CATG | 2 cut(s) | 289, 336 |
| CviJI | RGCY | 6 cut(s) | 33, 77, 112, 278, 340, 356 |
| CviKI_1 | RGCY | 6 cut(s) | 33, 77, 112, 278, 340, 356 |
| DdeI | CTNAG | 1 cut(s) | 38 |
| DpnI | GATC | 1 cut(s) | 309 |
| DpnII | GATC | 1 cut(s) | 307 |
| EaeI | YGGCCR | 1 cut(s) | 338 |
| Eam1104I | CTCTTC | 2 cut(s) | 92, 141 |
| EarI | CTCTTC | 2 cut(s) | 92, 141 |
| EcoRII | CCWGG | 1 cut(s) | 92 |
| FaeI | CATG | 2 cut(s) | 292, 339 |
| FaiI | YATR | 6 cut(s) | 66, 128, 200, 243, 290, 337 |
| FatI | CATG | 2 cut(s) | 288, 335 |
| Fnu4HI | GCNGC | 1 cut(s) | 6 |
| FokI | GGATG | 2 cut(s) | 39, 278 |
| Fsp4HI | GCNGC | 1 cut(s) | 6 |
| GluI | GCNGC | 1 cut(s) | 6 |
| GsuI | CTGGAG | 2 cut(s) | 57, 76 |
| HaeIII | GGCC | 2 cut(s) | 340, 356 |
| Hin1II | CATG | 2 cut(s) | 292, 339 |
| HindIII | AAGCTT | 2 cut(s) | 31, 110 |
| HinfI | GANTC | 2 cut(s) | 149, 157 |
| HphI | GGTGA | 2 cut(s) | 127, 295 |
| Hpy166II | GTNNAC | 3 cut(s) | 135, 286, 328 |
| Hpy188I | TCNGA | 1 cut(s) | 39 |
| Hpy188III | TCNNGA | 1 cut(s) | 188 |
| Hpy8I | GTNNAC | 3 cut(s) | 135, 286, 328 |
| HpyAV | CCTTC | 1 cut(s) | 346 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 275 |
| HpyF3I | CTNAG | 1 cut(s) | 38 |
| Hsp92II | CATG | 2 cut(s) | 292, 339 |
| Kzo9I | GATC | 1 cut(s) | 307 |
| LpnPI | CCDG | 5 cut(s) | 79, 87, 106, 334, 354 |
| LweI | GCATC | 3 cut(s) | 17, 181, 256 |
| MaeIII | GTNAC | 2 cut(s) | 214, 244 |
| MalI | GATC | 1 cut(s) | 309 |
| MboI | GATC | 1 cut(s) | 307 |
| MboII | GAAGA | 4 cut(s) | 79, 96, 158, 310 |
| MlsI | TGGCCA | 1 cut(s) | 340 |
| MluI | ACGCGT | 1 cut(s) | 313 |
| MluNI | TGGCCA | 1 cut(s) | 340 |
| MlyI | GAGTC | 2 cut(s) | 151, 158 |
| MnlI | CCTC | 5 cut(s) | 33, 81, 148, 253, 256 |
| Mox20I | TGGCCA | 1 cut(s) | 340 |
| MscI | TGGCCA | 1 cut(s) | 340 |
| MseI | TTAA | 1 cut(s) | 14 |
| Msp20I | TGGCCA | 1 cut(s) | 340 |
| MspR9I | CCNGG | 1 cut(s) | 94 |
| MvaI | CCWGG | 1 cut(s) | 94 |
| MvnI | CGCG | 1 cut(s) | 315 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 275 |
| NdeII | GATC | 1 cut(s) | 307 |
| NlaIII | CATG | 2 cut(s) | 292, 339 |
| NmuCI | GTSAC | 1 cut(s) | 244 |
| PkrI | GCNGC | 1 cut(s) | 7 |
| PleI | GAGTC | 2 cut(s) | 151, 157 |
| PpsI | GAGTC | 2 cut(s) | 151, 157 |
| Psp6I | CCWGG | 1 cut(s) | 92 |
| PspGI | CCWGG | 1 cut(s) | 92 |
| SaqAI | TTAA | 1 cut(s) | 14 |
| SatI | GCNGC | 1 cut(s) | 6 |
| Sau3AI | GATC | 1 cut(s) | 307 |
| SchI | GAGTC | 2 cut(s) | 151, 158 |
| ScrFI | CCNGG | 1 cut(s) | 94 |
| SetI | ASST | 7 cut(s) | 35, 114, 127, 140, 235, 251, 370 |
| SfaNI | GCATC | 3 cut(s) | 17, 181, 256 |
| SmlI | CTYRAG | 1 cut(s) | 159 |
| SmoI | CTYRAG | 1 cut(s) | 159 |
| SsiI | CCGC | 1 cut(s) | 5 |
| StyD4I | CCNGG | 1 cut(s) | 92 |
| TauI | GCSGC | 1 cut(s) | 8 |
| Tru1I | TTAA | 1 cut(s) | 14 |
| Tru9I | TTAA | 1 cut(s) | 14 |
| TseFI | GTSAC | 1 cut(s) | 244 |
| Tsp45I | GTSAC | 1 cut(s) | 244 |
| TspDTI | ATGAA | 1 cut(s) | 305 |