Ubiquitin family
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.6G233900_v2.0.a1 |
| pyrus_communis | pycom12g11410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 224 |
| AgsI | TTSAA | 4 cut(s) | 47, 103, 437, 455 |
| AjnI | CCWGG | 1 cut(s) | 223 |
| Alw26I | GTCTC | 1 cut(s) | 222 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 127 |
| AoxI | GGCC | 1 cut(s) | 221 |
| ApeKI | GCWGC | 1 cut(s) | 148 |
| AsuHPI | GGTGA | 3 cut(s) | 25, 124, 262 |
| BbvI | GCAGC | 1 cut(s) | 135 |
| BccI | CCATC | 1 cut(s) | 375 |
| BciT130I | CCWGG | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 222 |
| BfaI | CTAG | 1 cut(s) | 134 |
| BfmI | CTRYAG | 2 cut(s) | 149, 429 |
| BisI | GCNGC | 1 cut(s) | 149 |
| BlsI | GCNGC | 1 cut(s) | 150 |
| Bme1390I | CCNGG | 1 cut(s) | 225 |
| BmrFI | CCNGG | 1 cut(s) | 225 |
| BpmI | CTGGAG | 1 cut(s) | 246 |
| Bsa29I | ATCGAT | 1 cut(s) | 387 |
| BsaI | GGTCTC | 1 cut(s) | 222 |
| BsaJI | CCNNGG | 1 cut(s) | 218 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 15, 45 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseBI | CCWGG | 1 cut(s) | 225 |
| BseCI | ATCGAT | 1 cut(s) | 387 |
| BseDI | CCNNGG | 1 cut(s) | 218 |
| BseGI | GGATG | 1 cut(s) | 160 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseMII | CTCAG | 4 cut(s) | 30, 220, 305, 338 |
| BseRI | GAGGAG | 1 cut(s) | 107 |
| BseXI | GCAGC | 1 cut(s) | 135 |
| BshFI | GGCC | 1 cut(s) | 223 |
| BshVI | ATCGAT | 1 cut(s) | 387 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BsmAI | GTCTC | 1 cut(s) | 222 |
| BsnI | GGCC | 1 cut(s) | 223 |
| Bso31I | GGTCTC | 1 cut(s) | 222 |
| Bsp143I | GATC | 2 cut(s) | 310, 384 |
| BspANI | GGCC | 1 cut(s) | 223 |
| BspCNI | CTCAG | 4 cut(s) | 31, 219, 306, 339 |
| BspDI | ATCGAT | 1 cut(s) | 387 |
| BspMAI | CTGCAG | 1 cut(s) | 153 |
| BspTNI | GGTCTC | 1 cut(s) | 222 |
| BssECI | CCNNGG | 1 cut(s) | 218 |
| BssMI | GATC | 2 cut(s) | 310, 384 |
| BssT1I | CCWWGG | 1 cut(s) | 218 |
| Bst2UI | CCWGG | 1 cut(s) | 225 |
| Bst4CI | ACNGT | 2 cut(s) | 298, 395 |
| Bst6I | CTCTTC | 2 cut(s) | 74, 110 |
| BstDEI | CTNAG | 4 cut(s) | 39, 206, 314, 347 |
| BstF5I | GGATG | 1 cut(s) | 160 |
| BstKTI | GATC | 2 cut(s) | 313, 387 |
| BstMAI | GTCTC | 1 cut(s) | 222 |
| BstMBI | GATC | 2 cut(s) | 310, 384 |
| BstNI | CCWGG | 1 cut(s) | 225 |
| BstSCI | CCNGG | 1 cut(s) | 223 |
| BstSFI | CTRYAG | 2 cut(s) | 149, 429 |
| BstV1I | GCAGC | 1 cut(s) | 135 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 191 |
| Bsu15I | ATCGAT | 1 cut(s) | 387 |
| BsuRI | GGCC | 1 cut(s) | 223 |
| BsuTUI | ATCGAT | 1 cut(s) | 387 |
| BtsCI | GGATG | 1 cut(s) | 160 |
| BtsIMutI | CAGTG | 1 cut(s) | 214 |
| CaiI | CAGNNNCTG | 1 cut(s) | 127 |
| ClaI | ATCGAT | 1 cut(s) | 387 |
| CviAII | CATG | 1 cut(s) | 301 |
| CviJI | RGCY | 3 cut(s) | 133, 223, 308 |
| CviKI_1 | RGCY | 3 cut(s) | 133, 223, 308 |
| DdeI | CTNAG | 4 cut(s) | 39, 206, 314, 347 |
| DpnI | GATC | 2 cut(s) | 312, 386 |
| DpnII | GATC | 2 cut(s) | 310, 384 |
| Eam1104I | CTCTTC | 2 cut(s) | 74, 110 |
| EarI | CTCTTC | 2 cut(s) | 74, 110 |
| Eco130I | CCWWGG | 1 cut(s) | 218 |
| Eco31I | GGTCTC | 1 cut(s) | 222 |
| EcoRII | CCWGG | 1 cut(s) | 223 |
| EcoT14I | CCWWGG | 1 cut(s) | 218 |
| EcoT22I | ATGCAT | 1 cut(s) | 242 |
| ErhI | CCWWGG | 1 cut(s) | 218 |
| FaeI | CATG | 1 cut(s) | 304 |
| FaiI | YATR | 7 cut(s) | 11, 192, 302, 362, 409, 414, 416 |
| FatI | CATG | 1 cut(s) | 300 |
| Fnu4HI | GCNGC | 1 cut(s) | 149 |
| FokI | GGATG | 1 cut(s) | 167 |
| Fsp4HI | GCNGC | 1 cut(s) | 149 |
| FspBI | CTAG | 1 cut(s) | 134 |
| GluI | GCNGC | 1 cut(s) | 149 |
| GsuI | CTGGAG | 1 cut(s) | 246 |
| HaeIII | GGCC | 1 cut(s) | 223 |
| Hin1II | CATG | 1 cut(s) | 304 |
| HinfI | GANTC | 2 cut(s) | 204, 343 |
| HphI | GGTGA | 3 cut(s) | 25, 124, 262 |
| Hpy188I | TCNGA | 2 cut(s) | 315, 348 |
| Hpy188III | TCNNGA | 2 cut(s) | 71, 371 |
| HpyCH4III | ACNGT | 2 cut(s) | 298, 395 |
| HpyCH4V | TGCA | 4 cut(s) | 62, 151, 240, 407 |
| HpyF3I | CTNAG | 4 cut(s) | 39, 206, 314, 347 |
| Hsp92II | CATG | 1 cut(s) | 304 |
| Kzo9I | GATC | 2 cut(s) | 310, 384 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 6 cut(s) | 6, 51, 137, 140, 210, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 135 |
| MaeI | CTAG | 1 cut(s) | 134 |
| MaeIII | GTNAC | 3 cut(s) | 31, 211, 355 |
| MalI | GATC | 2 cut(s) | 312, 386 |
| MboI | GATC | 2 cut(s) | 310, 384 |
| MboII | GAAGA | 2 cut(s) | 91, 127 |
| MluCI | AATT | 8 cut(s) | 15, 66, 172, 285, 324, 424, 438, 444 |
| MlyI | GAGTC | 1 cut(s) | 198 |
| MmeI | TCCRAC | 1 cut(s) | 148 |
| MnlI | CCTC | 9 cut(s) | 17, 75, 85, 103, 111, 151, 246, 324, 408 |
| Mph1103I | ATGCAT | 1 cut(s) | 242 |
| MseI | TTAA | 3 cut(s) | 200, 441, 463 |
| MspR9I | CCNGG | 1 cut(s) | 225 |
| MvaI | CCWGG | 1 cut(s) | 225 |
| NdeII | GATC | 2 cut(s) | 310, 384 |
| NlaIII | CATG | 1 cut(s) | 304 |
| NmuCI | GTSAC | 3 cut(s) | 31, 211, 355 |
| NsiI | ATGCAT | 1 cut(s) | 242 |
| PfeI | GAWTC | 1 cut(s) | 343 |
| PkrI | GCNGC | 1 cut(s) | 150 |
| PleI | GAGTC | 1 cut(s) | 198 |
| PpsI | GAGTC | 1 cut(s) | 198 |
| Psp6I | CCWGG | 1 cut(s) | 223 |
| PspGI | CCWGG | 1 cut(s) | 223 |
| PstI | CTGCAG | 1 cut(s) | 153 |
| PstNI | CAGNNNCTG | 1 cut(s) | 127 |
| SaqAI | TTAA | 3 cut(s) | 200, 441, 463 |
| SatI | GCNGC | 1 cut(s) | 149 |
| Sau3AI | GATC | 2 cut(s) | 310, 384 |
| SchI | GAGTC | 1 cut(s) | 198 |
| ScrFI | CCNGG | 1 cut(s) | 225 |
| SetI | ASST | 2 cut(s) | 114, 220 |
| SfcI | CTRYAG | 2 cut(s) | 149, 429 |
| Sse9I | AATT | 8 cut(s) | 15, 66, 172, 285, 324, 424, 438, 444 |
| SspMI | CTAG | 1 cut(s) | 134 |
| StyD4I | CCNGG | 1 cut(s) | 223 |
| StyI | CCWWGG | 1 cut(s) | 218 |
| TaaI | ACNGT | 2 cut(s) | 298, 395 |
| TaqI | TCGA | 1 cut(s) | 387 |
| TasI | AATT | 8 cut(s) | 15, 66, 172, 285, 324, 424, 438, 444 |
| TfiI | GAWTC | 1 cut(s) | 343 |
| Tru1I | TTAA | 3 cut(s) | 200, 441, 463 |
| Tru9I | TTAA | 3 cut(s) | 200, 441, 463 |
| TscAI | CASTG | 1 cut(s) | 214 |
| TseFI | GTSAC | 3 cut(s) | 31, 211, 355 |
| TseI | GCWGC | 1 cut(s) | 148 |
| Tsp45I | GTSAC | 3 cut(s) | 31, 211, 355 |
| TspGWI | ACGGA | 1 cut(s) | 392 |
| TspRI | CASTG | 1 cut(s) | 214 |
| XspI | CTAG | 1 cut(s) | 134 |
| Zsp2I | ATGCAT | 1 cut(s) | 242 |