Prupe.6G357900_v2.0.a1

Serine threonine-protein phosphatase 7 long form homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0024156
Physical Location & Seq
Reverse (-)
30308484 .. 30309786
1303 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G357900.1

Sequence Viewer

Length: 1092 bp
ATGAGGTTGGATTGTACCATGCTAAATGCTTTGCTACGACACTATGATCGTAATTTAAAGTGTTTTATCTTTAATGGTAATTCACTCTATTTTAGTTTAGTAGATGTCCTTCTCATCACCGGTATGCCGATCGATGGTAGACCGGTTATTGGTAGGATAGGGAAAACCGAAAATTTATTTTTTAATGCTTTTGGTATCGATCCTCCTCCAGAGTCTTTGGATGGAGGGAGGATTAGGCTTAGTTGGTTAAGAGAAAAATATAGTAATAACCCAGTACGTCCAGATGAGGATGGGTGGGCACACTATCTTAGAGCCTACATCATGTATGTCATTGGGTCATATTTAATACCCGATGACTGCACTGGATTAGTTTCTGCCCAGTATTTGGGGCTCTTGGACAATCTTCAGGAGGTTGGTAGCTATGCGTGGGGCGCAGCCGCTTGGGCGAGCTTGTACAACTCTTTGGATCGAGGAATCGTAAACGGCTTGGCCTATGCTCTCATGGTATTTGCAATAGAGCATATAAAGCCACTACGTATAGAGCTGATAGGGGAGACAGTGGATCTCCCGATGGAGTGTCCATTAATGGTGTCGTGGTCCCACCTTCTCCACAAACGCTTGAAGGCGAACACAGTTCCCAAGTTTGGAGTCTACATGCAAATTTTGGGGAACGTGACTGATGAAAATTTCGTACAGCGGCCTTATGAGAGGCTTAGCCATACTCTTCTAAGGGAGGGTTATGAGCGTTATGCCCTTCAGCTGGCTAAGGCATGCTCAGTGACTCTGTGCATCAATTATCACATAGTCGTCCCTCACAAACCAAACAACTATGCTAGGCAGTTTGGTTTCGAGAATATAGACCTGGATTCGATTCCAGAGCTTCCTGATGTGGTGGTTGAAGTAAGAAAGAAGGGGCCAAAGAAAGATTTAAATCTTGCGGACCACGGACACTTTCCCCTGTACATTAACAGCTGGCTTGGCAGGTTTCCTTTGAGAGGGCCACGAATAGGTATGTTCATTCTGGTTTCTTTAATTTTTTTTAATAATTCTGATTTTTATAGCCGCACGGCTCTACCAATTTTTTTTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

364

Amino Acids

41.5

Weight (kDa)

7.14

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0024156)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g27420
prunus_persica Prupe.5G202300_v2.0.a1 Prupe.6G357900_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 972
AccB7I CCANNNNNTGG 1 cut(s) 385
AccI GTMKAC 2 cut(s) 139, 651
AciI CCGC 4 cut(s) 438, 697, 938, 1063
AclWI GGATC 3 cut(s) 194, 474, 570
AcsI RAATTY 3 cut(s) 172, 660, 685
AcuI CTGAAG 2 cut(s) 389, 740
AfaI GTAC 5 cut(s) 16, 276, 455, 693, 962
AfiI CCNNNNNNNGG 7 cut(s) 134, 149, 385, 644, 760, 995, 1007
AgeI ACCGGT 2 cut(s) 119, 142
AgsI TTSAA 2 cut(s) 622, 899
AjnI CCWGG 1 cut(s) 861
AluBI AGCT 6 cut(s) 420, 450, 544, 760, 880, 972
AluI AGCT 6 cut(s) 420, 450, 544, 760, 880, 972
Alw26I GTCTC 1 cut(s) 548
AlwI GGATC 3 cut(s) 194, 474, 570
AoxI GGCC 4 cut(s) 489, 698, 914, 998
ApeKI GCWGC 1 cut(s) 434
ApoI RAATTY 3 cut(s) 172, 660, 685
AseI ATTAAT 1 cut(s) 584
AsiGI ACCGGT 2 cut(s) 119, 142
AspLEI GCGC 1 cut(s) 434
AspS9I GGNCC 4 cut(s) 597, 914, 940, 998
AsuHPI GGTGA 1 cut(s) 109
AvaII GGWCC 2 cut(s) 597, 940
BaeGI GKGCMC 1 cut(s) 301
BanII GRGCYC 1 cut(s) 393
BarI GAAGNNNNNNTAC 2 cut(s) 93, 125
BbvI GCAGC 1 cut(s) 446
BccI CCATC 4 cut(s) 128, 215, 284, 565
BceAI ACGGC 2 cut(s) 499, 1083
BciT130I CCWGG 1 cut(s) 863
BcoDI GTCTC 1 cut(s) 548
BfaI CTAG 1 cut(s) 834
BfuAI ACCTGC 1 cut(s) 972
BglI GCCNNNNNGGC 1 cut(s) 443
BisI GCNGC 4 cut(s) 435, 438, 698, 1063
BlpI GCTNAGC 1 cut(s) 713
BlsI GCNGC 4 cut(s) 436, 439, 699, 1064
Bme1390I CCNGG 1 cut(s) 863
Bme18I GGWCC 2 cut(s) 597, 940
BmgT120I GGNCC 4 cut(s) 597, 914, 940, 998
BmiI GGNNCC 2 cut(s) 599, 915
BmrFI CCNGG 1 cut(s) 863
BmrI ACTGGG 2 cut(s) 266, 373
BmsI GCATC 1 cut(s) 798
BmuI ACTGGG 2 cut(s) 266, 373
BpmI CTGGAG 1 cut(s) 192
Bpu10I CCTNAGC 1 cut(s) 765
Bpu1102I GCTNAGC 1 cut(s) 713
Bsa29I ATCGAT 2 cut(s) 132, 198
BsaAI YACGTR 1 cut(s) 536
BsaBI GATNNNNATC 1 cut(s) 930
BsaJI CCNNGG 1 cut(s) 943
BsaWI WCCGGW 2 cut(s) 119, 142
Bsc4I CCNNNNNNNGG 7 cut(s) 134, 149, 385, 644, 760, 995, 1007
Bse118I RCCGGY 2 cut(s) 119, 142
Bse1I ACTGG 3 cut(s) 272, 367, 379
Bse8I GATNNNNATC 1 cut(s) 930
BseBI CCWGG 1 cut(s) 863
BseCI ATCGAT 2 cut(s) 132, 198
BseDI CCNNGG 1 cut(s) 943
BseGI GGATG 2 cut(s) 226, 295
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 7 cut(s) 134, 149, 385, 644, 760, 995, 1007
BseMII CTCAG 1 cut(s) 789
BseNI ACTGG 3 cut(s) 272, 367, 379
BseRI GAGGAG 1 cut(s) 195
BseSI GKGCMC 1 cut(s) 301
BseXI GCAGC 1 cut(s) 446
BsgI GTGCAG 1 cut(s) 343
Bsh1285I CGRYCG 1 cut(s) 132
BshFI GGCC 4 cut(s) 491, 700, 916, 1000
BshTI ACCGGT 2 cut(s) 119, 142
BshVI ATCGAT 2 cut(s) 132, 198
BsiEI CGRYCG 1 cut(s) 132
BsiSI CCGG 2 cut(s) 120, 143
BslFI GGGAC 2 cut(s) 583, 794
BslI CCNNNNNNNGG 7 cut(s) 134, 149, 385, 644, 760, 995, 1007
BsmAI GTCTC 1 cut(s) 548
BsmFI GGGAC 2 cut(s) 583, 794
BsnI GGCC 4 cut(s) 491, 700, 916, 1000
Bsp1286I GDGCHC 2 cut(s) 301, 393
Bsp1407I TGTACA 2 cut(s) 453, 960
Bsp143I GATC 5 cut(s) 46, 129, 199, 466, 562
Bsp1720I GCTNAGC 1 cut(s) 713
BspACI CCGC 4 cut(s) 438, 697, 938, 1063
BspANI GGCC 4 cut(s) 491, 700, 916, 1000
BspCNI CTCAG 1 cut(s) 788
BspDI ATCGAT 2 cut(s) 132, 198
BspLI GGNNCC 2 cut(s) 599, 915
BspMI ACCTGC 1 cut(s) 972
BspPI GGATC 3 cut(s) 194, 474, 570
BsrFI RCCGGY 2 cut(s) 119, 142
BsrGI TGTACA 2 cut(s) 453, 960
BsrI ACTGG 3 cut(s) 272, 367, 379
BssAI RCCGGY 2 cut(s) 119, 142
BssECI CCNNGG 1 cut(s) 943
BssMI GATC 5 cut(s) 46, 129, 199, 466, 562
Bst2UI CCWGG 1 cut(s) 863
Bst4CI ACNGT 2 cut(s) 559, 634
Bst6I CTCTTC 1 cut(s) 729
BstAUI TGTACA 2 cut(s) 453, 960
BstBAI YACGTR 1 cut(s) 536
BstC8I GCNNGC 4 cut(s) 448, 762, 772, 974
BstDEI CTNAG 6 cut(s) 239, 308, 713, 728, 765, 775
BstDSI CCRYGG 1 cut(s) 943
BstENI CCTNNNNNAGG 1 cut(s) 993
BstF5I GGATG 2 cut(s) 226, 295
BstHHI GCGC 1 cut(s) 434
BstKTI GATC 5 cut(s) 49, 132, 202, 469, 565
BstMAI GTCTC 1 cut(s) 548
BstMBI GATC 5 cut(s) 46, 129, 199, 466, 562
BstMCI CGRYCG 1 cut(s) 132
BstMWI GCNNNNNNNGC 4 cut(s) 431, 443, 526, 978
BstNI CCWGG 1 cut(s) 863
BstNSI RCATGY 2 cut(s) 658, 774
BstSCI CCNGG 1 cut(s) 861
BstSLI GKGCMC 1 cut(s) 301
BstSNI TACGTA 1 cut(s) 536
BstV1I GCAGC 1 cut(s) 446
BstX2I RGATCY 1 cut(s) 562
BstYI RGATCY 1 cut(s) 562
Bsu15I ATCGAT 2 cut(s) 132, 198
BsuRI GGCC 4 cut(s) 491, 700, 916, 1000
BsuTUI ATCGAT 2 cut(s) 132, 198
BtgI CCRYGG 1 cut(s) 943
BtsCI GGATG 2 cut(s) 226, 295
BtsIMutI CAGTG 3 cut(s) 360, 564, 783
BveI ACCTGC 1 cut(s) 972
Cac8I GCNNGC 4 cut(s) 448, 762, 772, 974
CfoI GCGC 1 cut(s) 434
Cfr10I RCCGGY 2 cut(s) 119, 142
Cfr13I GGNCC 4 cut(s) 597, 914, 940, 998
ClaI ATCGAT 2 cut(s) 132, 198
Csp6I GTAC 5 cut(s) 15, 275, 454, 692, 961
CspAI ACCGGT 2 cut(s) 119, 142
CviAII CATG 5 cut(s) 19, 322, 502, 655, 771
CviQI GTAC 5 cut(s) 15, 275, 454, 692, 961
DdeI CTNAG 6 cut(s) 239, 308, 713, 728, 765, 775
DpnI GATC 5 cut(s) 48, 131, 201, 468, 564
DpnII GATC 5 cut(s) 46, 129, 199, 466, 562
DraI TTTAAA 2 cut(s) 57, 930
Eam1104I CTCTTC 1 cut(s) 729
EarI CTCTTC 1 cut(s) 729
Eco105I TACGTA 1 cut(s) 536
Eco24I GRGCYC 1 cut(s) 393
Eco47I GGWCC 2 cut(s) 597, 940
Eco57I CTGAAG 2 cut(s) 389, 740
EcoNI CCTNNNNNAGG 1 cut(s) 993
EcoRII CCWGG 1 cut(s) 861
EcoT38I GRGCYC 1 cut(s) 393
FaeI CATG 5 cut(s) 22, 325, 505, 658, 774
FaqI GGGAC 2 cut(s) 583, 794
FatI CATG 5 cut(s) 18, 321, 501, 654, 770
FblI GTMKAC 2 cut(s) 139, 651
Fnu4HI GCNGC 4 cut(s) 435, 438, 698, 1063
FokI GGATG 2 cut(s) 233, 302
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 4 cut(s) 435, 438, 698, 1063
FspBI CTAG 1 cut(s) 834
GlaI GCGC 1 cut(s) 433
GluI GCNGC 4 cut(s) 435, 438, 698, 1063
GsuI CTGGAG 1 cut(s) 192
HaeIII GGCC 4 cut(s) 491, 700, 916, 1000
HapII CCGG 2 cut(s) 120, 143
HhaI GCGC 1 cut(s) 434
Hin1II CATG 5 cut(s) 22, 325, 505, 658, 774
Hin6I GCGC 1 cut(s) 432
HinP1I GCGC 1 cut(s) 432
HinfI GANTC 6 cut(s) 212, 474, 648, 781, 866, 871
HpaII CCGG 2 cut(s) 120, 143
HphI GGTGA 1 cut(s) 109
Hpy166II GTNNAC 3 cut(s) 140, 481, 652
Hpy188I TCNGA 1 cut(s) 1051
Hpy188III TCNNGA 7 cut(s) 209, 281, 407, 568, 850, 875, 884
Hpy8I GTNNAC 3 cut(s) 140, 481, 652
HpyAV CCTTC 5 cut(s) 119, 614, 616, 764, 904
HpyCH4III ACNGT 2 cut(s) 559, 634
HpyCH4IV ACGT 3 cut(s) 277, 535, 672
HpyCH4V TGCA 4 cut(s) 360, 512, 658, 789
HpyF10VI GCNNNNNNNGC 4 cut(s) 431, 443, 526, 978
HpyF3I CTNAG 6 cut(s) 239, 308, 713, 728, 765, 775
HpySE526I ACGT 3 cut(s) 277, 535, 672
Hsp92II CATG 5 cut(s) 22, 325, 505, 658, 774
HspAI GCGC 1 cut(s) 432
Kzo9I GATC 5 cut(s) 46, 129, 199, 466, 562
Lsp1109I GCAGC 1 cut(s) 446
LweI GCATC 1 cut(s) 798
MaeI CTAG 1 cut(s) 834
MaeII ACGT 3 cut(s) 277, 535, 672
MaeIII GTNAC 2 cut(s) 673, 778
MalI GATC 5 cut(s) 48, 131, 201, 468, 564
MboI GATC 5 cut(s) 46, 129, 199, 466, 562
MboII GAAGA 2 cut(s) 395, 716
MflI RGATCY 1 cut(s) 562
MhlI GDGCHC 2 cut(s) 301, 393
MluCI AATT 9 cut(s) 52, 79, 172, 660, 685, 793, 1032, 1045, 1077
MlyI GAGTC 3 cut(s) 221, 657, 775
MslI CAYNNNNRTG 1 cut(s) 122
MspA1I CMGCKG 3 cut(s) 697, 760, 972
MspI CCGG 2 cut(s) 120, 143
MspR9I CCNGG 1 cut(s) 863
MvaI CCWGG 1 cut(s) 863
MwoI GCNNNNNNNGC 4 cut(s) 431, 443, 526, 978
NdeII GATC 5 cut(s) 46, 129, 199, 466, 562
NlaIII CATG 5 cut(s) 22, 325, 505, 658, 774
NlaIV GGNNCC 2 cut(s) 599, 915
NmuCI GTSAC 2 cut(s) 673, 778
NspI RCATGY 2 cut(s) 658, 774
PaeI GCATGC 1 cut(s) 774
PfeI GAWTC 3 cut(s) 474, 866, 871
PflMI CCANNNNNTGG 1 cut(s) 385
PinAI ACCGGT 2 cut(s) 119, 142
PkrI GCNGC 4 cut(s) 436, 439, 699, 1064
Ple19I CGATCG 1 cut(s) 132
PleI GAGTC 3 cut(s) 220, 656, 775
PpsI GAGTC 3 cut(s) 220, 656, 775
Ppu21I YACGTR 1 cut(s) 536
PshBI ATTAAT 1 cut(s) 584
Psp6I CCWGG 1 cut(s) 861
PspGI CCWGG 1 cut(s) 861
PspN4I GGNNCC 2 cut(s) 599, 915
PspPI GGNCC 4 cut(s) 597, 914, 940, 998
PsuI RGATCY 1 cut(s) 562
PvuI CGATCG 1 cut(s) 132
PvuII CAGCTG 2 cut(s) 760, 972
RsaI GTAC 5 cut(s) 16, 276, 455, 693, 962
RsaNI GTAC 5 cut(s) 15, 275, 454, 692, 961
RseI CAYNNNNRTG 1 cut(s) 122
SatI GCNGC 4 cut(s) 435, 438, 698, 1063
Sau3AI GATC 5 cut(s) 46, 129, 199, 466, 562
Sau96I GGNCC 4 cut(s) 597, 914, 940, 998
SchI GAGTC 3 cut(s) 221, 657, 775
ScrFI CCNGG 1 cut(s) 863
SduI GDGCHC 2 cut(s) 301, 393
SfaNI GCATC 1 cut(s) 798
SinI GGWCC 2 cut(s) 597, 940
SmiI ATTTAAAT 1 cut(s) 930
SmiMI CAYNNNNRTG 1 cut(s) 122
SnaBI TACGTA 1 cut(s) 536
SphI GCATGC 1 cut(s) 774
Sse9I AATT 9 cut(s) 52, 79, 172, 660, 685, 793, 1032, 1045, 1077
SsiI CCGC 4 cut(s) 438, 697, 938, 1063
SspMI CTAG 1 cut(s) 834
StyD4I CCNGG 1 cut(s) 861
SwaI ATTTAAAT 1 cut(s) 930
TaaI ACNGT 2 cut(s) 559, 634
TaiI ACGT 3 cut(s) 280, 538, 675
TaqI TCGA 5 cut(s) 132, 198, 469, 849, 869
TasI AATT 9 cut(s) 52, 79, 172, 660, 685, 793, 1032, 1045, 1077
TatI WGTACW 2 cut(s) 453, 960
TauI GCSGC 3 cut(s) 440, 700, 1065
TfiI GAWTC 3 cut(s) 474, 866, 871
TscAI CASTG 3 cut(s) 367, 564, 783
TseFI GTSAC 2 cut(s) 673, 778
TseI GCWGC 1 cut(s) 434
Tsp45I GTSAC 2 cut(s) 673, 778
TspDTI ATGAA 2 cut(s) 696, 1006
TspGWI ACGGA 1 cut(s) 960
TspRI CASTG 3 cut(s) 367, 564, 783
Van91I CCANNNNNTGG 1 cut(s) 385
VpaK11BI GGWCC 2 cut(s) 597, 940
VspI ATTAAT 1 cut(s) 584
XagI CCTNNNNNAGG 1 cut(s) 993
XapI RAATTY 3 cut(s) 172, 660, 685
XceI RCATGY 2 cut(s) 658, 774
XmiI GTMKAC 2 cut(s) 139, 651
XspI CTAG 1 cut(s) 834
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.