Retrotransposon gag protein
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G014200_v2.0.a1 Prupe.7G022700_v2.0.a1 Prupe.7G022700_v2.0.a1 Prupe.8G057000_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 129 |
| AcsI | RAATTY | 1 cut(s) | 246 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 163 |
| AgsI | TTSAA | 1 cut(s) | 195 |
| AjiI | CACGTC | 1 cut(s) | 178 |
| Alw26I | GTCTC | 1 cut(s) | 210 |
| AlwI | GGATC | 1 cut(s) | 129 |
| ApoI | RAATTY | 1 cut(s) | 246 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 188, 220 |
| BclI | TGATCA | 1 cut(s) | 180 |
| BcoDI | GTCTC | 1 cut(s) | 210 |
| BfaI | CTAG | 1 cut(s) | 140 |
| BmgBI | CACGTC | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 155 |
| BpuEI | CTTGAG | 1 cut(s) | 192 |
| BsaBI | GATNNNNATC | 1 cut(s) | 126 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 163 |
| Bse3DI | GCAATG | 1 cut(s) | 45 |
| Bse8I | GATNNNNATC | 1 cut(s) | 126 |
| BseGI | GGATG | 1 cut(s) | 146 |
| BseJI | GATNNNNATC | 1 cut(s) | 126 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BseMI | GCAATG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 163 |
| BsmAI | GTCTC | 1 cut(s) | 210 |
| Bsp143I | GATC | 2 cut(s) | 121, 180 |
| BspPI | GGATC | 1 cut(s) | 129 |
| BsrDI | GCAATG | 1 cut(s) | 45 |
| BssMI | GATC | 2 cut(s) | 121, 180 |
| Bst4CI | ACNGT | 1 cut(s) | 158 |
| BstC8I | GCNNGC | 1 cut(s) | 36 |
| BstF5I | GGATG | 1 cut(s) | 146 |
| BstKTI | GATC | 2 cut(s) | 124, 183 |
| BstMAI | GTCTC | 1 cut(s) | 210 |
| BstMBI | GATC | 2 cut(s) | 121, 180 |
| BstNSI | RCATGY | 1 cut(s) | 34 |
| BtrI | CACGTC | 1 cut(s) | 178 |
| BtsCI | GGATG | 1 cut(s) | 146 |
| Cac8I | GCNNGC | 1 cut(s) | 36 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 69, 104 |
| CviAII | CATG | 2 cut(s) | 31, 118 |
| DpnI | GATC | 2 cut(s) | 123, 182 |
| DpnII | GATC | 2 cut(s) | 121, 180 |
| FaeI | CATG | 2 cut(s) | 34, 121 |
| FaiI | YATR | 7 cut(s) | 14, 32, 48, 63, 65, 119, 162 |
| FatI | CATG | 2 cut(s) | 30, 117 |
| FauNDI | CATATG | 1 cut(s) | 63 |
| FbaI | TGATCA | 1 cut(s) | 180 |
| FokI | GGATG | 1 cut(s) | 133 |
| FspBI | CTAG | 1 cut(s) | 140 |
| Hin1II | CATG | 2 cut(s) | 34, 121 |
| HinfI | GANTC | 5 cut(s) | 4, 95, 108, 114, 203 |
| Hpy188I | TCNGA | 2 cut(s) | 100, 113 |
| Hpy188III | TCNNGA | 1 cut(s) | 209 |
| HpyAV | CCTTC | 1 cut(s) | 193 |
| HpyCH4III | ACNGT | 1 cut(s) | 158 |
| HpyCH4IV | ACGT | 2 cut(s) | 177, 214 |
| HpyCH4V | TGCA | 1 cut(s) | 134 |
| HpySE526I | ACGT | 2 cut(s) | 177, 214 |
| Hsp92II | CATG | 2 cut(s) | 34, 121 |
| Ksp22I | TGATCA | 1 cut(s) | 180 |
| Kzo9I | GATC | 2 cut(s) | 121, 180 |
| LpnPI | CCDG | 2 cut(s) | 48, 81 |
| LweI | GCATC | 1 cut(s) | 155 |
| MaeI | CTAG | 1 cut(s) | 140 |
| MaeII | ACGT | 2 cut(s) | 177, 214 |
| MalI | GATC | 2 cut(s) | 123, 182 |
| MboI | GATC | 2 cut(s) | 121, 180 |
| MboII | GAAGA | 1 cut(s) | 113 |
| MluCI | AATT | 1 cut(s) | 246 |
| MlyI | GAGTC | 2 cut(s) | 108, 212 |
| MmeI | TCCRAC | 1 cut(s) | 32 |
| MslI | CAYNNNNRTG | 1 cut(s) | 159 |
| NdeI | CATATG | 1 cut(s) | 63 |
| NdeII | GATC | 2 cut(s) | 121, 180 |
| NlaIII | CATG | 2 cut(s) | 34, 121 |
| NspI | RCATGY | 1 cut(s) | 34 |
| PfeI | GAWTC | 2 cut(s) | 95, 108 |
| PleI | GAGTC | 2 cut(s) | 108, 211 |
| PpsI | GAGTC | 2 cut(s) | 108, 211 |
| RseI | CAYNNNNRTG | 1 cut(s) | 159 |
| Sau3AI | GATC | 2 cut(s) | 121, 180 |
| SchI | GAGTC | 2 cut(s) | 108, 212 |
| SetI | ASST | 2 cut(s) | 180, 217 |
| SfaNI | GCATC | 1 cut(s) | 155 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 207 |
| SmoI | CTYRAG | 1 cut(s) | 207 |
| Sse9I | AATT | 1 cut(s) | 246 |
| SspI | AATATT | 1 cut(s) | 187 |
| SspMI | CTAG | 1 cut(s) | 140 |
| TaaI | ACNGT | 1 cut(s) | 158 |
| TaiI | ACGT | 2 cut(s) | 180, 217 |
| TasI | AATT | 1 cut(s) | 246 |
| TfiI | GAWTC | 2 cut(s) | 95, 108 |
| TspDTI | ATGAA | 2 cut(s) | 50, 63 |
| TspGWI | ACGGA | 1 cut(s) | 67 |
| XapI | RAATTY | 1 cut(s) | 246 |
| XceI | RCATGY | 1 cut(s) | 34 |
| XspI | CTAG | 1 cut(s) | 140 |