Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0027599

Physical Location & Seq

Genomic Coordinates Reverse (-)

7718834 .. 7722604

Gene Structure 3771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G041300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGAACTCAAAGCTCTTTTTGGCAGCAAGCATAGGCGTTGTCCTCTCTATCTTGACAACCCTCAACGTTATCAAATTTTTCTCTATTAAAAATAATGCTGCAACAGCAAATGTAGAAAAGCTTTCAAATCACGAGGAAAATAAGTTTGAAGTTGTTCCAATTGTGGAAGATGCTGTTGGTCCAGAGAGCTTTGTCTTCGACCCTCTTGGCGGAGGTCCCTACACCGGCATTTCAGATGGCCGCATCGTCAAATGGGATCAAGATAAACACCACTGGATCAACTTCGCTGTAACTTCTCCAAACAGAGATGGCTGTGAAGGGTCACATGAACACGACAAAACGGAGCACATTTGTGGACGTCCATTAGGCTTATGTTTCAACGAAACGAGTGGTGATCTTTACGTTGCTGATGCTTATATGGGGCTACTCATTGTGGGCCCTCAAGGTGGCTTGGCTACTGAGGTTGTGACACGTGCACATGGCATTCCATTTGGATTTACAAATGCCTTGGACATTGATCAAGAACCGGGAGCAGTGTATTTCACAGATAGCAGTTCACAATATCAGAGAAGGAATTACATCTCTGTGATACTAAGTGGGGATAAAACTGGAAGGCTAATGAAATATGACCCAGAAAGCAAACAAGTGCAAGTTCTTCTTGGAAACCTCTCATTTCCAAATGGGGTGGCATTGAGCAAAAATGGAGACTTCATCCTACTGGCAGAGACCACACATTGCAGGATTATGAGGTATTGGTTAAAAACACCGAAAGCCGGAACTTTCCAAGTGTTTGCTCAACTTCCAGGATTTCCAGACAACATTAAAAGGAGCCCCAGAGGGGGTTTTTGGGTGGGGATTCATTCAAGAAGACTCTGGATTTTGAAATTGGTTCTTTCATACCCTTCCTTAGGAAATGCACTGCTTAAGCTTCCCTTGGACATTACGAAAGCTTATTCTTACGTGGCGAAATGGACAGGGAACGGATTGATAATCAGGTTGAGTGAGCAAGGTGTCATATTGGAAATGCTTGAAGACACAAGTGGAAATAGATGGAAGTCTATCAGTGAAGTGGTGGAGAAAGATGAAACTCTTTGGATTGGATCAGTTACAATGCCATTTGCAGGAAAATATAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0012505 GO:0016020 GO:0016787 GO:0016788 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Str_synth

Protein Analysis

380

Amino Acids

41.93

Weight (kDa)

6.76

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0027599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41290
prunus_persica	Prupe.7G041300_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	361
AciI	CCGC	2 cut(s)	210, 241
AclI	AACGTT	1 cut(s)	66
AclWI	GGATC	3 cut(s)	264, 284, 1108
AcoI	YGGCCR	1 cut(s)	238
AcsI	RAATTY	2 cut(s)	74, 1134
AcvI	CACGTG	1 cut(s)	473
AcyI	GRCGYC	1 cut(s)	358
AfiI	CCNNNNNNNGG	8 cut(s)	209, 224, 446, 773, 838, 839, 908, 1121
AflII	CTTAAG	1 cut(s)	923
AflIII	ACRYGT	1 cut(s)	470
AgsI	TTSAA	6 cut(s)	126, 149, 379, 864, 883, 1031
AjnI	CCWGG	1 cut(s)	802
AjuI	GAANNNNNNNTTGG	2 cut(s)	159, 191
AleI	CACNNNNGTG	1 cut(s)	351
AluBI	AGCT	5 cut(s)	13, 121, 189, 928, 950
AluI	AGCT	5 cut(s)	13, 121, 189, 928, 950
Alw21I	GWGCWC	2 cut(s)	348, 478
Alw26I	GTCTC	2 cut(s)	699, 719
Alw44I	GTGCAC	1 cut(s)	474
AlwI	GGATC	3 cut(s)	264, 284, 1108
AoxI	GGCC	2 cut(s)	238, 436
ApaI	GGGCCC	1 cut(s)	440
ApaLI	GTGCAC	1 cut(s)	474
ApeKI	GCWGC	2 cut(s)	23, 98
ApoI	RAATTY	2 cut(s)	74, 1134
Asp700I	GAANNNNTTC	1 cut(s)	153
AspS9I	GGNCC	4 cut(s)	179, 215, 436, 437
AsuC2I	CCSGG	1 cut(s)	528
AsuHPI	GGTGA	1 cut(s)	404
AvaII	GGWCC	2 cut(s)	179, 215
AxyI	CCTNAGG	1 cut(s)	907
BaeGI	GKGCMC	2 cut(s)	440, 478
BanII	GRGCYC	2 cut(s)	440, 833
BauI	CACGAG	1 cut(s)	131
BbrPI	CACGTG	1 cut(s)	473
BbsI	GAAGAC	3 cut(s)	187, 874, 1038
Bbv12I	GWGCWC	2 cut(s)	348, 478
BbvI	GCAGC	2 cut(s)	35, 85
BccI	CCATC	3 cut(s)	230, 302, 1044
BciT130I	CCWGG	1 cut(s)	804
BclI	TGATCA	1 cut(s)	517
BcnI	CCSGG	1 cut(s)	528
BcoDI	GTCTC	2 cut(s)	699, 719
BfrI	CTTAAG	1 cut(s)	923
BisI	GCNGC	3 cut(s)	24, 99, 241
BlsI	GCNGC	3 cut(s)	25, 100, 242
Bme1390I	CCNGG	2 cut(s)	528, 804
Bme18I	GGWCC	2 cut(s)	179, 215
BmgT120I	GGNCC	4 cut(s)	179, 215, 436, 437
BmiI	GGNNCC	3 cut(s)	217, 438, 830
BmrFI	CCNGG	2 cut(s)	528, 804
BmsI	GCATC	3 cut(s)	160, 252, 400
BpiI	GAAGAC	3 cut(s)	187, 874, 1038
BpuEI	CTTGAG	1 cut(s)	426
BpuMI	CCSGG	1 cut(s)	528
BsaAI	YACGTR	2 cut(s)	473, 961
BsaHI	GRCGYC	1 cut(s)	358
BsaI	GGTCTC	1 cut(s)	719
BsaJI	CCNNGG	2 cut(s)	507, 933
Bsc4I	CCNNNNNNNGG	8 cut(s)	209, 224, 446, 773, 838, 839, 908, 1121
Bse118I	RCCGGY	1 cut(s)	224
Bse1I	ACTGG	3 cut(s)	278, 613, 723
Bse21I	CCTNAGG	1 cut(s)	907
Bse3DI	GCAATG	1 cut(s)	733
BseBI	CCWGG	1 cut(s)	804
BseDI	CCNNGG	2 cut(s)	507, 933
BseGI	GGATG	1 cut(s)	711
BseLI	CCNNNNNNNGG	8 cut(s)	209, 224, 446, 773, 838, 839, 908, 1121
BseMI	GCAATG	1 cut(s)	733
BseMII	CTCAG	1 cut(s)	450
BseNI	ACTGG	3 cut(s)	278, 613, 723
BseSI	GKGCMC	2 cut(s)	440, 478
BseXI	GCAGC	2 cut(s)	35, 85
BshFI	GGCC	2 cut(s)	240, 438
BsiHKAI	GWGCWC	2 cut(s)	348, 478
BsiSI	CCGG	3 cut(s)	225, 527, 774
BslFI	GGGAC	1 cut(s)	201
BslI	CCNNNNNNNGG	8 cut(s)	209, 224, 446, 773, 838, 839, 908, 1121
BsmAI	GTCTC	2 cut(s)	699, 719
BsmFI	GGGAC	1 cut(s)	201
BsmI	GAATGC	1 cut(s)	483
BsnI	GGCC	2 cut(s)	240, 438
Bso31I	GGTCTC	1 cut(s)	719
Bsp120I	GGGCCC	1 cut(s)	436
Bsp1286I	GDGCHC	4 cut(s)	348, 440, 478, 833
Bsp143I	GATC	5 cut(s)	256, 276, 394, 517, 1100
BspACI	CCGC	2 cut(s)	210, 241
BspANI	GGCC	2 cut(s)	240, 438
BspCNI	CTCAG	1 cut(s)	451
BspLI	GGNNCC	3 cut(s)	217, 438, 830
BspPI	GGATC	3 cut(s)	264, 284, 1108
BspTI	CTTAAG	1 cut(s)	923
BspTNI	GGTCTC	1 cut(s)	719
BsrDI	GCAATG	1 cut(s)	733
BsrFI	RCCGGY	1 cut(s)	224
BsrI	ACTGG	3 cut(s)	278, 613, 723
BssAI	RCCGGY	1 cut(s)	224
BssECI	CCNNGG	2 cut(s)	507, 933
BssMI	GATC	5 cut(s)	256, 276, 394, 517, 1100
BssNI	GRCGYC	1 cut(s)	358
BssSI	CACGAG	1 cut(s)	131
BssT1I	CCWWGG	2 cut(s)	507, 933
Bst2BI	CACGAG	1 cut(s)	131
Bst2UI	CCWGG	1 cut(s)	804
BstACI	GRCGYC	1 cut(s)	358
BstAFI	CTTAAG	1 cut(s)	923
BstBAI	YACGTR	2 cut(s)	473, 961
BstC8I	GCNNGC	1 cut(s)	28
BstDEI	CTNAG	3 cut(s)	459, 593, 907
BstENI	CCTNNNNNAGG	1 cut(s)	906
BstF5I	GGATG	1 cut(s)	711
BstKTI	GATC	5 cut(s)	259, 279, 397, 520, 1103
BstMAI	GTCTC	2 cut(s)	699, 719
BstMBI	GATC	5 cut(s)	256, 276, 394, 517, 1100
BstMWI	GCNNNNNNNGC	1 cut(s)	104
BstNI	CCWGG	1 cut(s)	804
BstSCI	CCNGG	2 cut(s)	526, 802
BstSLI	GKGCMC	2 cut(s)	440, 478
BstV1I	GCAGC	2 cut(s)	35, 85
BstV2I	GAAGAC	3 cut(s)	187, 874, 1038
Bsu36I	CCTNAGG	1 cut(s)	907
BsuRI	GGCC	2 cut(s)	240, 438
BtsCI	GGATG	1 cut(s)	711
BtsI	GCAGTG	2 cut(s)	540, 917
BtsIMutI	CAGTG	4 cut(s)	271, 540, 917, 1069
Cac8I	GCNNGC	1 cut(s)	28
Cfr10I	RCCGGY	1 cut(s)	224
Cfr13I	GGNCC	4 cut(s)	179, 215, 436, 437
CspCI	CAANNNNNGTGG	2 cut(s)	666, 701
CviAII	CATG	2 cut(s)	326, 479
DdeI	CTNAG	3 cut(s)	459, 593, 907
DpnI	GATC	5 cut(s)	258, 278, 396, 519, 1102
DpnII	GATC	5 cut(s)	256, 276, 394, 517, 1100
EaeI	YGGCCR	1 cut(s)	238
EciI	GGCGGA	1 cut(s)	225
Eco130I	CCWWGG	2 cut(s)	507, 933
Eco24I	GRGCYC	2 cut(s)	440, 833
Eco31I	GGTCTC	1 cut(s)	719
Eco47I	GGWCC	2 cut(s)	179, 215
Eco72I	CACGTG	1 cut(s)	473
Eco81I	CCTNAGG	1 cut(s)	907
EcoNI	CCTNNNNNAGG	1 cut(s)	906
EcoO109I	RGGNCCY	2 cut(s)	215, 437
EcoRII	CCWGG	1 cut(s)	802
EcoT14I	CCWWGG	2 cut(s)	507, 933
EcoT38I	GRGCYC	2 cut(s)	440, 833
ErhI	CCWWGG	2 cut(s)	507, 933
FaeI	CATG	2 cut(s)	329, 482
FalI	AAGNNNNNCTT	4 cut(s)	642, 674, 917, 949
FaqI	GGGAC	1 cut(s)	201
FatI	CATG	2 cut(s)	325, 478
FbaI	TGATCA	1 cut(s)	517
Fnu4HI	GCNGC	3 cut(s)	24, 99, 241
FokI	GGATG	1 cut(s)	698
FriOI	GRGCYC	2 cut(s)	440, 833
Fsp4HI	GCNGC	3 cut(s)	24, 99, 241
GluI	GCNGC	3 cut(s)	24, 99, 241
HaeIII	GGCC	2 cut(s)	240, 438
HapII	CCGG	3 cut(s)	225, 527, 774
Hin1I	GRCGYC	1 cut(s)	358
Hin1II	CATG	2 cut(s)	329, 482
HindIII	AAGCTT	3 cut(s)	119, 926, 948
HinfI	GANTC	2 cut(s)	856, 870
HpaII	CCGG	3 cut(s)	225, 527, 774
HphI	GGTGA	1 cut(s)	404
Hpy166II	GTNNAC	3 cut(s)	356, 476, 557
Hpy188I	TCNGA	2 cut(s)	235, 567
Hpy188III	TCNNGA	8 cut(s)	52, 131, 182, 260, 521, 812, 864, 874
Hpy8I	GTNNAC	3 cut(s)	356, 476, 557
HpyAV	CCTTC	4 cut(s)	311, 564, 606, 912
HpyCH4IV	ACGT	5 cut(s)	66, 358, 402, 472, 960
HpyCH4V	TGCA	6 cut(s)	101, 476, 649, 738, 917, 1121
HpyF10VI	GCNNNNNNNGC	1 cut(s)	104
HpyF3I	CTNAG	3 cut(s)	459, 593, 907
HpySE526I	ACGT	5 cut(s)	66, 358, 402, 472, 960
Hsp92I	GRCGYC	1 cut(s)	358
Hsp92II	CATG	2 cut(s)	329, 482
Ksp22I	TGATCA	1 cut(s)	517
Kzo9I	GATC	5 cut(s)	256, 276, 394, 517, 1100
LmnI	GCTCC	3 cut(s)	343, 530, 828
Lsp1109I	GCAGC	2 cut(s)	35, 85
LweI	GCATC	3 cut(s)	160, 252, 400
MaeII	ACGT	5 cut(s)	66, 358, 402, 472, 960
MaeIII	GTNAC	4 cut(s)	289, 321, 466, 1105
MalI	GATC	5 cut(s)	258, 278, 396, 519, 1102
MboI	GATC	5 cut(s)	256, 276, 394, 517, 1100
MboII	GAAGA	5 cut(s)	179, 187, 647, 879, 1043
MfeI	CAATTG	1 cut(s)	159
MhlI	GDGCHC	4 cut(s)	348, 440, 478, 833
MluCI	AATT	5 cut(s)	74, 159, 574, 884, 1134
MlyI	GAGTC	1 cut(s)	864
MroXI	GAANNNNTTC	1 cut(s)	153
MseI	TTAA	5 cut(s)	87, 758, 822, 924, 1138
MslI	CAYNNNNRTG	2 cut(s)	351, 584
MspCI	CTTAAG	1 cut(s)	923
MspI	CCGG	3 cut(s)	225, 527, 774
MspR9I	CCNGG	2 cut(s)	528, 804
MunI	CAATTG	1 cut(s)	159
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	1 cut(s)	804
MwoI	GCNNNNNNNGC	1 cut(s)	104
NciI	CCSGG	1 cut(s)	528
NdeII	GATC	5 cut(s)	256, 276, 394, 517, 1100
NlaIII	CATG	2 cut(s)	329, 482
NlaIV	GGNNCC	3 cut(s)	217, 438, 830
NmuCI	GTSAC	2 cut(s)	321, 466
OliI	CACNNNNGTG	1 cut(s)	351
PctI	GAATGC	1 cut(s)	483
PdmI	GAANNNNTTC	1 cut(s)	153
PfeI	GAWTC	1 cut(s)	856
PfoI	TCCNGGA	1 cut(s)	802
PkrI	GCNGC	3 cut(s)	25, 100, 242
PleI	GAGTC	1 cut(s)	864
PmaCI	CACGTG	1 cut(s)	473
PmlI	CACGTG	1 cut(s)	473
PpsI	GAGTC	1 cut(s)	864
Ppu21I	YACGTR	2 cut(s)	473, 961
PpuMI	RGGWCCY	1 cut(s)	215
Psp1406I	AACGTT	1 cut(s)	66
Psp5II	RGGWCCY	1 cut(s)	215
Psp6I	CCWGG	1 cut(s)	802
PspCI	CACGTG	1 cut(s)	473
PspGI	CCWGG	1 cut(s)	802
PspN4I	GGNNCC	3 cut(s)	217, 438, 830
PspOMI	GGGCCC	1 cut(s)	436
PspPI	GGNCC	4 cut(s)	179, 215, 436, 437
PspPPI	RGGWCCY	1 cut(s)	215
RseI	CAYNNNNRTG	2 cut(s)	351, 584
SaqAI	TTAA	5 cut(s)	87, 758, 822, 924, 1138
SatI	GCNGC	3 cut(s)	24, 99, 241
Sau3AI	GATC	5 cut(s)	256, 276, 394, 517, 1100
Sau96I	GGNCC	4 cut(s)	179, 215, 436, 437
SchI	GAGTC	1 cut(s)	864
ScrFI	CCNGG	2 cut(s)	528, 804
SduI	GDGCHC	4 cut(s)	348, 440, 478, 833
SfaNI	GCATC	3 cut(s)	160, 252, 400
SinI	GGWCC	2 cut(s)	179, 215
SmiMI	CAYNNNNRTG	2 cut(s)	351, 584
SmlI	CTYRAG	2 cut(s)	441, 923
SmoI	CTYRAG	2 cut(s)	441, 923
Sse9I	AATT	5 cut(s)	74, 159, 574, 884, 1134
SsiI	CCGC	2 cut(s)	210, 241
StyD4I	CCNGG	2 cut(s)	526, 802
StyI	CCWWGG	2 cut(s)	507, 933
TaiI	ACGT	5 cut(s)	69, 361, 405, 475, 963
TaqI	TCGA	1 cut(s)	198
TasI	AATT	5 cut(s)	74, 159, 574, 884, 1134
TauI	GCSGC	1 cut(s)	243
TfiI	GAWTC	1 cut(s)	856
Tru1I	TTAA	5 cut(s)	87, 758, 822, 924, 1138
Tru9I	TTAA	5 cut(s)	87, 758, 822, 924, 1138
TscAI	CASTG	4 cut(s)	278, 540, 924, 1069
TseFI	GTSAC	2 cut(s)	321, 466
TseI	GCWGC	2 cut(s)	23, 98
Tsp45I	GTSAC	2 cut(s)	321, 466
TspDTI	ATGAA	7 cut(s)	17, 342, 635, 700, 848, 885, 1098
TspGWI	ACGGA	2 cut(s)	356, 996
TspRI	CASTG	4 cut(s)	278, 540, 924, 1069
Vha464I	CTTAAG	1 cut(s)	923
VneI	GTGCAC	1 cut(s)	474
VpaK11BI	GGWCC	2 cut(s)	179, 215
XagI	CCTNNNNNAGG	1 cut(s)	906
XapI	RAATTY	2 cut(s)	74, 1134
XmnI	GAANNNNTTC	1 cut(s)	153
ZraI	GACGTC	1 cut(s)	359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.