Prupe.7G050700_v2.0.a1

thaumatin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0024569
Physical Location & Seq
Forward (+)
8792049 .. 8793201
1153 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G050700.1

Sequence Viewer

Length: 741 bp
ATGCAGCCCCACGTTGATACCACGACCAATAGTCCCTTTGGTGAGGATATTCTGAAAGAAGCACTAGGTTGGGTAAAAAATAATACAAGAAAAGTCAATTACAATTGCCCCTACACGGTCTGGCCAGCCTCCTTTGGAAATCCTCAATTATCAACCACAGGGTTCGAGTTAGCATCCCAAGCTAACTTCCAGCTAGACACTCCGGTGCCATGGAGCGGTCGCTTCTGGGCCCGAACTGGATGCTCCACGGACGCCTCTGGAAAGTTCGTCTGCGAAACCGCAGACTGTGACTCTGGTCAGCTCATGTGCAACGGTAAGACTGGCATTCCGCCGGCAACTTTAGCGGAATTCACTATTGCAGCAGGCGGAGGACAAGATTTCTACGATGTTAGTCTTGTTGATGGCTTCAACTTGCCCATGTCTGTGACTCCACAAGGCGGTACCGGCACCTGCAAGACGGGTAGTTGCGCGGCGAATGTGAACGCAGTTTGTCCGACTGACCTGCAAAAGATAGGGTCCGATGGGAGCGTGGTTGCCTGCTTGAGCGCATGTGTTAAATTCGGTGACCCACAGTACTGTTGCACTCCGCCTCAAGAAACTAAAGAGAAATGCCCACCAACAAATTACTCTCAGATATTCCATGACCAATGCCCCGACGCTTACAGCTATGCTTATGATGACAACAAGGGTTTATTTACGTGCAGTGGTGGACCTAACTACCTCATTACTTTCTGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0008150 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Thaumatin

Protein Analysis

247

Amino Acids

26.26

Weight (kDa)

4.55

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0024569)

Species Orthologous Gene IDs
prunus_persica Prupe.7G050700_v2.0.a1 Prupe.7G050900_v2.0.a1 Prupe.7G051300_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 458
Acc36I ACCTGC 2 cut(s) 458, 510
Acc65I GGTACC 1 cut(s) 440
AccB1I GGYRCC 3 cut(s) 205, 440, 446
AccBSI CCGCTC 1 cut(s) 216
AccII CGCG 1 cut(s) 470
AciI CCGC 8 cut(s) 216, 279, 329, 344, 366, 438, 470, 587
AcoI YGGCCR 1 cut(s) 122
AcsI RAATTY 2 cut(s) 347, 557
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 2 cut(s) 442, 575
AfiI CCNNNNNNNGG 3 cut(s) 115, 215, 437
AgsI TTSAA 1 cut(s) 409
AhdI GACNNNNNGTC 1 cut(s) 30
AleI CACNNNNGTG 1 cut(s) 203
AluBI AGCT 4 cut(s) 182, 193, 301, 666
AluI AGCT 4 cut(s) 182, 193, 301, 666
AoxI GGCC 2 cut(s) 122, 228
ApaI GGGCCC 1 cut(s) 232
ApeKI GCWGC 2 cut(s) 4, 359
ApoI RAATTY 2 cut(s) 347, 557
Asp718I GGTACC 1 cut(s) 440
AspLEI GCGC 2 cut(s) 470, 548
AspS9I GGNCC 4 cut(s) 228, 229, 516, 710
AsuHPI GGTGA 2 cut(s) 53, 575
AvaII GGWCC 2 cut(s) 516, 710
BaeGI GKGCMC 1 cut(s) 232
BalI TGGCCA 1 cut(s) 124
BanI GGYRCC 3 cut(s) 205, 440, 446
BanII GRGCYC 1 cut(s) 232
BbvI GCAGC 2 cut(s) 16, 371
BccI CCATC 2 cut(s) 395, 515
BcgI CGANNNNNNTGC 4 cut(s) 222, 256, 484, 518
BfaI CTAG 2 cut(s) 65, 194
BfuAI ACCTGC 2 cut(s) 458, 510
BisI GCNGC 3 cut(s) 5, 360, 471
BlsI GCNGC 3 cut(s) 6, 361, 472
BmcAI AGTACT 1 cut(s) 575
Bme18I GGWCC 2 cut(s) 516, 710
BmeRI GACNNNNNGTC 1 cut(s) 30
BmgT120I GGNCC 4 cut(s) 228, 229, 516, 710
BmiI GGNNCC 5 cut(s) 207, 230, 442, 448, 517
BmsI GCATC 2 cut(s) 182, 230
BoxI GACNNNNGTC 1 cut(s) 294
BpuEI CTTGAG 2 cut(s) 562, 576
BsaAI YACGTR 1 cut(s) 699
BsaHI GRCGYC 1 cut(s) 252
BsaJI CCNNGG 2 cut(s) 209, 246
BsaWI WCCGGW 1 cut(s) 202
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 215, 437
Bse118I RCCGGY 2 cut(s) 331, 443
Bse1I ACTGG 2 cut(s) 241, 325
BseDI CCNNGG 2 cut(s) 209, 246
BseGI GGATG 2 cut(s) 173, 245
BseLI CCNNNNNNNGG 3 cut(s) 115, 215, 437
BseMII CTCAG 1 cut(s) 644
BseNI ACTGG 2 cut(s) 241, 325
BseSI GKGCMC 1 cut(s) 232
BseXI GCAGC 2 cut(s) 16, 371
BsgI GTGCAG 1 cut(s) 721
Bsh1236I CGCG 1 cut(s) 470
Bsh1285I CGRYCG 1 cut(s) 220
BshFI GGCC 2 cut(s) 124, 230
BshNI GGYRCC 3 cut(s) 205, 440, 446
BsiEI CGRYCG 1 cut(s) 220
BsiSI CCGG 3 cut(s) 203, 332, 444
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 3 cut(s) 115, 215, 437
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 1 cut(s) 324
BsnI GGCC 2 cut(s) 124, 230
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 1 cut(s) 232
Bsp19I CCATGG 1 cut(s) 209
BspACI CCGC 8 cut(s) 216, 279, 329, 344, 366, 438, 470, 587
BspANI GGCC 2 cut(s) 124, 230
BspCNI CTCAG 1 cut(s) 643
BspFNI CGCG 1 cut(s) 470
BspLI GGNNCC 5 cut(s) 207, 230, 442, 448, 517
BspMI ACCTGC 2 cut(s) 458, 510
BspT107I GGYRCC 3 cut(s) 205, 440, 446
BsrBI CCGCTC 1 cut(s) 216
BsrFI RCCGGY 2 cut(s) 331, 443
BsrI ACTGG 2 cut(s) 241, 325
BssAI RCCGGY 2 cut(s) 331, 443
BssECI CCNNGG 2 cut(s) 209, 246
BssNI GRCGYC 1 cut(s) 252
BssT1I CCWWGG 1 cut(s) 209
Bst4CI ACNGT 5 cut(s) 118, 287, 314, 573, 578
BstACI GRCGYC 1 cut(s) 252
BstBAI YACGTR 1 cut(s) 699
BstC8I GCNNGC 4 cut(s) 126, 333, 364, 538
BstDEI CTNAG 1 cut(s) 630
BstDSI CCRYGG 2 cut(s) 209, 246
BstEII GGTNACC 1 cut(s) 563
BstF5I GGATG 2 cut(s) 173, 245
BstFNI CGCG 1 cut(s) 470
BstHHI GCGC 2 cut(s) 470, 548
BstMCI CGRYCG 1 cut(s) 220
BstMWI GCNNNNNNNGC 3 cut(s) 179, 341, 444
BstNSI RCATGY 1 cut(s) 552
BstPAI GACNNNNGTC 1 cut(s) 294
BstPI GGTNACC 1 cut(s) 563
BstSLI GKGCMC 1 cut(s) 232
BstUI CGCG 1 cut(s) 470
BstV1I GCAGC 2 cut(s) 16, 371
BsuRI GGCC 2 cut(s) 124, 230
BtgI CCRYGG 2 cut(s) 209, 246
BtsCI GGATG 2 cut(s) 173, 245
BtsI GCAGTG 1 cut(s) 709
BtsIMutI CAGTG 1 cut(s) 709
BveI ACCTGC 2 cut(s) 458, 510
Cac8I GCNNGC 4 cut(s) 126, 333, 364, 538
CfoI GCGC 2 cut(s) 470, 548
Cfr10I RCCGGY 2 cut(s) 331, 443
Cfr13I GGNCC 4 cut(s) 228, 229, 516, 710
CseI GACGC 2 cut(s) 260, 665
Csp6I GTAC 2 cut(s) 441, 574
CviAII CATG 6 cut(s) 210, 304, 418, 549, 641, 738
CviJI RGCY 9 cut(s) 7, 124, 128, 182, 193, 230, 301, 405, 666
CviKI_1 RGCY 9 cut(s) 7, 124, 128, 182, 193, 230, 301, 405, 666
CviQI GTAC 2 cut(s) 441, 574
DdeI CTNAG 1 cut(s) 630
DriI GACNNNNNGTC 1 cut(s) 30
EaeI YGGCCR 1 cut(s) 122
Eam1105I GACNNNNNGTC 1 cut(s) 30
EciI GGCGGA 3 cut(s) 318, 381, 576
Eco130I CCWWGG 1 cut(s) 209
Eco24I GRGCYC 1 cut(s) 232
Eco47I GGWCC 2 cut(s) 516, 710
Eco91I GGTNACC 1 cut(s) 563
EcoO65I GGTNACC 1 cut(s) 563
EcoRI GAATTC 1 cut(s) 347
EcoT14I CCWWGG 1 cut(s) 209
EcoT38I GRGCYC 1 cut(s) 232
ErhI CCWWGG 1 cut(s) 209
FaeI CATG 6 cut(s) 213, 307, 421, 552, 644, 741
FaiI YATR 8 cut(s) 211, 305, 419, 550, 642, 669, 675, 739
FaqI GGGAC 1 cut(s) 18
FatI CATG 6 cut(s) 209, 303, 417, 548, 640, 737
Fnu4HI GCNGC 3 cut(s) 5, 360, 471
FokI GGATG 2 cut(s) 160, 252
FriOI GRGCYC 1 cut(s) 232
Fsp4HI GCNGC 3 cut(s) 5, 360, 471
FspBI CTAG 2 cut(s) 65, 194
GlaI GCGC 2 cut(s) 469, 547
GluI GCNGC 3 cut(s) 5, 360, 471
HaeIII GGCC 2 cut(s) 124, 230
HapII CCGG 3 cut(s) 203, 332, 444
HgaI GACGC 2 cut(s) 260, 665
HhaI GCGC 2 cut(s) 470, 548
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 6 cut(s) 213, 307, 421, 552, 644, 741
Hin6I GCGC 2 cut(s) 468, 546
HinP1I GCGC 2 cut(s) 468, 546
HinfI GANTC 2 cut(s) 290, 427
HpaII CCGG 3 cut(s) 203, 332, 444
HphI GGTGA 2 cut(s) 53, 575
Hpy166II GTNNAC 2 cut(s) 481, 710
Hpy188I TCNGA 4 cut(s) 54, 495, 520, 633
Hpy188III TCNNGA 2 cut(s) 258, 593
Hpy8I GTNNAC 2 cut(s) 481, 710
Hpy99I CGWCG 1 cut(s) 659
HpyCH4III ACNGT 5 cut(s) 118, 287, 314, 573, 578
HpyCH4IV ACGT 2 cut(s) 12, 698
HpyCH4V TGCA 7 cut(s) 4, 309, 359, 453, 505, 582, 702
HpyF10VI GCNNNNNNNGC 3 cut(s) 179, 341, 444
HpyF3I CTNAG 1 cut(s) 630
HpySE526I ACGT 2 cut(s) 12, 698
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 6 cut(s) 213, 307, 421, 552, 644, 741
HspAI GCGC 2 cut(s) 468, 546
KpnI GGTACC 1 cut(s) 444
KroI GCCGGC 1 cut(s) 331
KroNI GCCGGC 1 cut(s) 333
LmnI GCTCC 3 cut(s) 213, 248, 525
Lsp1109I GCAGC 2 cut(s) 16, 371
LweI GCATC 2 cut(s) 182, 230
MaeI CTAG 2 cut(s) 65, 194
MaeII ACGT 2 cut(s) 12, 698
MaeIII GTNAC 3 cut(s) 287, 424, 563
MbiI CCGCTC 1 cut(s) 216
MfeI CAATTG 1 cut(s) 103
MhlI GDGCHC 1 cut(s) 232
MlsI TGGCCA 1 cut(s) 124
MluCI AATT 6 cut(s) 97, 103, 146, 347, 557, 622
MluNI TGGCCA 1 cut(s) 124
MlyI GAGTC 2 cut(s) 284, 421
MmeI TCCRAC 1 cut(s) 518
MnlI CCTC 7 cut(s) 37, 139, 153, 265, 362, 600, 731
Mox20I TGGCCA 1 cut(s) 124
MroNI GCCGGC 1 cut(s) 331
MscI TGGCCA 1 cut(s) 124
MseI TTAA 1 cut(s) 555
MslI CAYNNNNRTG 2 cut(s) 203, 422
Msp20I TGGCCA 1 cut(s) 124
MspI CCGG 3 cut(s) 203, 332, 444
MunI CAATTG 1 cut(s) 103
Mva1269I GAATGC 1 cut(s) 324
MvnI CGCG 1 cut(s) 470
MwoI GCNNNNNNNGC 3 cut(s) 179, 341, 444
NaeI GCCGGC 1 cut(s) 333
NcoI CCATGG 1 cut(s) 209
NgoMIV GCCGGC 1 cut(s) 331
NlaIII CATG 6 cut(s) 213, 307, 421, 552, 644, 741
NlaIV GGNNCC 5 cut(s) 207, 230, 442, 448, 517
NmuCI GTSAC 3 cut(s) 287, 424, 563
NspI RCATGY 1 cut(s) 552
OliI CACNNNNGTG 1 cut(s) 203
PaqCI CACCTGC 1 cut(s) 458
PctI GAATGC 1 cut(s) 324
PdiI GCCGGC 1 cut(s) 333
PkrI GCNGC 3 cut(s) 6, 361, 472
PleI GAGTC 2 cut(s) 284, 421
PpsI GAGTC 2 cut(s) 284, 421
Ppu21I YACGTR 1 cut(s) 699
PshAI GACNNNNGTC 1 cut(s) 294
PspEI GGTNACC 1 cut(s) 563
PspN4I GGNNCC 5 cut(s) 207, 230, 442, 448, 517
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 4 cut(s) 228, 229, 516, 710
RsaI GTAC 2 cut(s) 442, 575
RsaNI GTAC 2 cut(s) 441, 574
RseI CAYNNNNRTG 2 cut(s) 203, 422
SaqAI TTAA 1 cut(s) 555
SatI GCNGC 3 cut(s) 5, 360, 471
Sau96I GGNCC 4 cut(s) 228, 229, 516, 710
ScaI AGTACT 1 cut(s) 575
SchI GAGTC 2 cut(s) 284, 421
SduI GDGCHC 1 cut(s) 232
SfaNI GCATC 2 cut(s) 182, 230
SinI GGWCC 2 cut(s) 516, 710
SmiMI CAYNNNNRTG 2 cut(s) 203, 422
SmlI CTYRAG 2 cut(s) 541, 591
SmoI CTYRAG 2 cut(s) 541, 591
Sse9I AATT 6 cut(s) 97, 103, 146, 347, 557, 622
SsiI CCGC 8 cut(s) 216, 279, 329, 344, 366, 438, 470, 587
SspMI CTAG 2 cut(s) 65, 194
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 5 cut(s) 118, 287, 314, 573, 578
TaiI ACGT 2 cut(s) 15, 701
TaqI TCGA 1 cut(s) 165
TasI AATT 6 cut(s) 97, 103, 146, 347, 557, 622
TatI WGTACW 1 cut(s) 573
TauI GCSGC 1 cut(s) 473
Tru1I TTAA 1 cut(s) 555
Tru9I TTAA 1 cut(s) 555
TscAI CASTG 1 cut(s) 709
TseFI GTSAC 3 cut(s) 287, 424, 563
TseI GCWGC 2 cut(s) 4, 359
Tsp45I GTSAC 3 cut(s) 287, 424, 563
TspGWI ACGGA 1 cut(s) 263
TspRI CASTG 1 cut(s) 709
VpaK11BI GGWCC 2 cut(s) 516, 710
XapI RAATTY 2 cut(s) 347, 557
XceI RCATGY 1 cut(s) 552
XspI CTAG 2 cut(s) 65, 194
ZrmI AGTACT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.