Prupe.7G051300_v2.0.a1

thaumatin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0024569
Physical Location & Seq
Reverse (-)
8932699 .. 8933607
909 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G051300.1

Sequence Viewer

Length: 729 bp
ATGATGAAGACCCTAGTAGCAGTCCTCAGCCTCAGCTTAACCCTCCTTTCATTCGGAGGTGCACATGCAGCGACAATGTCTTTCAAAAACAATTGCCCCTACACGGTCTGGCCAGCCTCCTTTGGAAATCCTCAATTATCAACCACAGGGTTCGAGTTAGCATCCCAAGCTAGCTTCCAGCTAGACACTCCGGTGCCATGGAGCGGCCGCTTCTGGGCCCGAACTAGATGCTCCACGGACGCCTCAGGAAAGTTCGTCTGCGAAACCGCAGACTGTGACTCTGGTCAGCTCATGTGCAACGGTAAGACTGGCATTCCGCCGGCAACTTTAGCGGAATTCACTATTGCAGCAGGCGGAGGACAAGATTTCTACGATGTTAGTCTTGTTGATGGCTTCAACTTGCCCATGTCTGTGACTCCACAAGGCGGTACTGGCACCTGCAAGATGGGTAGTTGCGCGGCGAACGTGAACCTAGTTTGTCCGAGTGAGCTGCAAAAGATAGGGTCCGATGGGAGCGTGGTTGCCTGCTTGAGCGCATGTGTTAAATTCGGTGAGCCACAGTACTGTTGCACTCCGCCTCAAGAAACTAAAGAGAAATGCCCACCGACAAATTACTCTCAGATATTCCATGAACAATGCCCCGACGCTTACAGCTATGCTTTTGATGACAACAAAGGTTTATTTACGTGCAGTGGTGGACCTAACTACCTCATTACTTTCTGCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0006950 GO:0006952 GO:0008150 GO:0050896
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Thaumatin

Protein Analysis

243

Amino Acids

25.65

Weight (kDa)

4.81

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0024569)

Species Orthologous Gene IDs
prunus_persica Prupe.7G050700_v2.0.a1 Prupe.7G050900_v2.0.a1 Prupe.7G051300_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 446
Acc36I ACCTGC 1 cut(s) 446
AccB1I GGYRCC 2 cut(s) 193, 434
AccBSI CCGCTC 1 cut(s) 204
AccII CGCG 1 cut(s) 458
AciI CCGC 9 cut(s) 204, 208, 267, 317, 332, 354, 426, 458, 575
AcoI YGGCCR 2 cut(s) 110, 205
AcsI RAATTY 2 cut(s) 335, 545
AcyI GRCGYC 1 cut(s) 240
AfaI GTAC 2 cut(s) 430, 563
AfiI CCNNNNNNNGG 4 cut(s) 103, 203, 214, 425
AgsI TTSAA 2 cut(s) 85, 397
AleI CACNNNNGTG 1 cut(s) 191
AluBI AGCT 7 cut(s) 36, 170, 174, 181, 289, 490, 654
AluI AGCT 7 cut(s) 36, 170, 174, 181, 289, 490, 654
Alw21I GWGCWC 1 cut(s) 64
Alw44I GTGCAC 1 cut(s) 60
AoxI GGCC 3 cut(s) 110, 205, 216
ApaI GGGCCC 1 cut(s) 220
ApaLI GTGCAC 1 cut(s) 60
ApeKI GCWGC 3 cut(s) 68, 347, 490
ApoI RAATTY 2 cut(s) 335, 545
AspLEI GCGC 2 cut(s) 458, 536
AspS9I GGNCC 4 cut(s) 216, 217, 504, 698
AsuHPI GGTGA 1 cut(s) 563
AsuNHI GCTAGC 1 cut(s) 170
AvaII GGWCC 2 cut(s) 504, 698
AxyI CCTNAGG 1 cut(s) 244
BaeGI GKGCMC 2 cut(s) 64, 220
BalI TGGCCA 1 cut(s) 112
BanI GGYRCC 2 cut(s) 193, 434
BanII GRGCYC 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 64
BbvCI CCTCAGC 2 cut(s) 26, 32
BbvI GCAGC 3 cut(s) 80, 359, 477
BccI CCATC 3 cut(s) 383, 439, 503
BcgI CGANNNNNNTGC 4 cut(s) 210, 244, 472, 506
BfaI CTAG 5 cut(s) 14, 171, 182, 225, 473
BfuAI ACCTGC 1 cut(s) 446
BisI GCNGC 6 cut(s) 69, 205, 208, 348, 459, 491
BlsI GCNGC 6 cut(s) 70, 206, 209, 349, 460, 492
BmcAI AGTACT 1 cut(s) 563
Bme18I GGWCC 2 cut(s) 504, 698
BmgT120I GGNCC 4 cut(s) 216, 217, 504, 698
BmiI GGNNCC 4 cut(s) 195, 218, 436, 505
BmsI GCATC 2 cut(s) 170, 218
BmtI GCTAGC 1 cut(s) 174
BoxI GACNNNNGTC 1 cut(s) 282
BpiI GAAGAC 1 cut(s) 14
Bpu10I CCTNAGC 2 cut(s) 26, 32
BpuEI CTTGAG 2 cut(s) 550, 564
BsaAI YACGTR 1 cut(s) 687
BsaHI GRCGYC 1 cut(s) 240
BsaJI CCNNGG 2 cut(s) 197, 234
BsaWI WCCGGW 1 cut(s) 190
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 203, 214, 425
Bse118I RCCGGY 1 cut(s) 319
Bse1I ACTGG 2 cut(s) 313, 436
Bse21I CCTNAGG 1 cut(s) 244
BseDI CCNNGG 2 cut(s) 197, 234
BseGI GGATG 1 cut(s) 161
BseLI CCNNNNNNNGG 4 cut(s) 103, 203, 214, 425
BseMII CTCAG 4 cut(s) 40, 46, 258, 632
BseNI ACTGG 2 cut(s) 313, 436
BseSI GKGCMC 2 cut(s) 64, 220
BseX3I CGGCCG 1 cut(s) 205
BseXI GCAGC 3 cut(s) 80, 359, 477
BsgI GTGCAG 1 cut(s) 709
Bsh1236I CGCG 1 cut(s) 458
Bsh1285I CGRYCG 1 cut(s) 208
BshFI GGCC 3 cut(s) 112, 207, 218
BshNI GGYRCC 2 cut(s) 193, 434
BsiEI CGRYCG 1 cut(s) 208
BsiHKAI GWGCWC 1 cut(s) 64
BsiSI CCGG 2 cut(s) 191, 320
BslI CCNNNNNNNGG 4 cut(s) 103, 203, 214, 425
BsmI GAATGC 1 cut(s) 312
BsnI GGCC 3 cut(s) 112, 207, 218
Bsp120I GGGCCC 1 cut(s) 216
Bsp1286I GDGCHC 2 cut(s) 64, 220
Bsp19I CCATGG 1 cut(s) 197
BspACI CCGC 9 cut(s) 204, 208, 267, 317, 332, 354, 426, 458, 575
BspANI GGCC 3 cut(s) 112, 207, 218
BspCNI CTCAG 4 cut(s) 39, 45, 257, 631
BspFNI CGCG 1 cut(s) 458
BspLI GGNNCC 4 cut(s) 195, 218, 436, 505
BspMI ACCTGC 1 cut(s) 446
BspOI GCTAGC 1 cut(s) 174
BspT107I GGYRCC 2 cut(s) 193, 434
BsrBI CCGCTC 1 cut(s) 204
BsrFI RCCGGY 1 cut(s) 319
BsrI ACTGG 2 cut(s) 313, 436
BssAI RCCGGY 1 cut(s) 319
BssECI CCNNGG 2 cut(s) 197, 234
BssNI GRCGYC 1 cut(s) 240
BssT1I CCWWGG 1 cut(s) 197
Bst4CI ACNGT 5 cut(s) 106, 275, 302, 561, 566
BstACI GRCGYC 1 cut(s) 240
BstBAI YACGTR 1 cut(s) 687
BstC8I GCNNGC 5 cut(s) 114, 172, 321, 352, 526
BstDEI CTNAG 4 cut(s) 26, 32, 244, 618
BstDSI CCRYGG 2 cut(s) 197, 234
BstF5I GGATG 1 cut(s) 161
BstFNI CGCG 1 cut(s) 458
BstHHI GCGC 2 cut(s) 458, 536
BstMCI CGRYCG 1 cut(s) 208
BstMWI GCNNNNNNNGC 4 cut(s) 68, 167, 329, 432
BstNSI RCATGY 2 cut(s) 68, 540
BstPAI GACNNNNGTC 1 cut(s) 282
BstSLI GKGCMC 2 cut(s) 64, 220
BstUI CGCG 1 cut(s) 458
BstV1I GCAGC 3 cut(s) 80, 359, 477
BstV2I GAAGAC 1 cut(s) 14
BstZI CGGCCG 1 cut(s) 205
Bsu36I CCTNAGG 1 cut(s) 244
BsuRI GGCC 3 cut(s) 112, 207, 218
BtgI CCRYGG 2 cut(s) 197, 234
BtsCI GGATG 1 cut(s) 161
BtsI GCAGTG 1 cut(s) 697
BtsIMutI CAGTG 1 cut(s) 697
BveI ACCTGC 1 cut(s) 446
Cac8I GCNNGC 5 cut(s) 114, 172, 321, 352, 526
CciNI GCGGCCGC 1 cut(s) 205
CfoI GCGC 2 cut(s) 458, 536
Cfr10I RCCGGY 1 cut(s) 319
Cfr13I GGNCC 4 cut(s) 216, 217, 504, 698
CseI GACGC 2 cut(s) 248, 653
Csp6I GTAC 2 cut(s) 429, 562
CviAII CATG 7 cut(s) 65, 198, 292, 406, 537, 629, 726
CviQI GTAC 2 cut(s) 429, 562
DdeI CTNAG 4 cut(s) 26, 32, 244, 618
EaeI YGGCCR 2 cut(s) 110, 205
EagI CGGCCG 1 cut(s) 205
EciI GGCGGA 3 cut(s) 306, 369, 564
EclXI CGGCCG 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 197
Eco24I GRGCYC 1 cut(s) 220
Eco47I GGWCC 2 cut(s) 504, 698
Eco52I CGGCCG 1 cut(s) 205
Eco81I CCTNAGG 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 335
EcoT14I CCWWGG 1 cut(s) 197
EcoT38I GRGCYC 1 cut(s) 220
ErhI CCWWGG 1 cut(s) 197
FaeI CATG 7 cut(s) 68, 201, 295, 409, 540, 632, 729
FaiI YATR 8 cut(s) 66, 199, 293, 407, 538, 630, 657, 727
FatI CATG 7 cut(s) 64, 197, 291, 405, 536, 628, 725
Fnu4HI GCNGC 6 cut(s) 69, 205, 208, 348, 459, 491
FokI GGATG 1 cut(s) 148
FriOI GRGCYC 1 cut(s) 220
Fsp4HI GCNGC 6 cut(s) 69, 205, 208, 348, 459, 491
FspBI CTAG 5 cut(s) 14, 171, 182, 225, 473
GlaI GCGC 2 cut(s) 457, 535
GluI GCNGC 6 cut(s) 69, 205, 208, 348, 459, 491
HaeIII GGCC 3 cut(s) 112, 207, 218
HapII CCGG 2 cut(s) 191, 320
HgaI GACGC 2 cut(s) 248, 653
HhaI GCGC 2 cut(s) 458, 536
Hin1I GRCGYC 1 cut(s) 240
Hin1II CATG 7 cut(s) 68, 201, 295, 409, 540, 632, 729
Hin6I GCGC 2 cut(s) 456, 534
HinP1I GCGC 2 cut(s) 456, 534
HinfI GANTC 2 cut(s) 278, 415
HpaII CCGG 2 cut(s) 191, 320
HphI GGTGA 1 cut(s) 563
Hpy166II GTNNAC 3 cut(s) 62, 469, 698
Hpy188I TCNGA 4 cut(s) 56, 483, 508, 621
Hpy188III TCNNGA 2 cut(s) 246, 581
Hpy8I GTNNAC 3 cut(s) 62, 469, 698
Hpy99I CGWCG 1 cut(s) 647
HpyCH4III ACNGT 5 cut(s) 106, 275, 302, 561, 566
HpyCH4IV ACGT 2 cut(s) 465, 686
HpyCH4V TGCA 8 cut(s) 62, 68, 297, 347, 441, 493, 570, 690
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 167, 329, 432
HpyF3I CTNAG 4 cut(s) 26, 32, 244, 618
HpySE526I ACGT 2 cut(s) 465, 686
Hsp92I GRCGYC 1 cut(s) 240
Hsp92II CATG 7 cut(s) 68, 201, 295, 409, 540, 632, 729
HspAI GCGC 2 cut(s) 456, 534
KroI GCCGGC 1 cut(s) 319
KroNI GCCGGC 1 cut(s) 321
LmnI GCTCC 3 cut(s) 201, 236, 513
Lsp1109I GCAGC 3 cut(s) 80, 359, 477
LweI GCATC 2 cut(s) 170, 218
MaeI CTAG 5 cut(s) 14, 171, 182, 225, 473
MaeII ACGT 2 cut(s) 465, 686
MaeIII GTNAC 2 cut(s) 275, 412
MbiI CCGCTC 1 cut(s) 204
MboII GAAGA 1 cut(s) 19
MfeI CAATTG 1 cut(s) 91
MhlI GDGCHC 2 cut(s) 64, 220
MlsI TGGCCA 1 cut(s) 112
MluCI AATT 5 cut(s) 91, 134, 335, 545, 610
MluNI TGGCCA 1 cut(s) 112
MlyI GAGTC 2 cut(s) 272, 409
Mox20I TGGCCA 1 cut(s) 112
MroNI GCCGGC 1 cut(s) 319
MscI TGGCCA 1 cut(s) 112
MseI TTAA 2 cut(s) 38, 543
MslI CAYNNNNRTG 2 cut(s) 191, 410
Msp20I TGGCCA 1 cut(s) 112
MspI CCGG 2 cut(s) 191, 320
MunI CAATTG 1 cut(s) 91
Mva1269I GAATGC 1 cut(s) 312
MvnI CGCG 1 cut(s) 458
MwoI GCNNNNNNNGC 4 cut(s) 68, 167, 329, 432
NaeI GCCGGC 1 cut(s) 321
NcoI CCATGG 1 cut(s) 197
NgoMIV GCCGGC 1 cut(s) 319
NheI GCTAGC 1 cut(s) 170
NlaIII CATG 7 cut(s) 68, 201, 295, 409, 540, 632, 729
NlaIV GGNNCC 4 cut(s) 195, 218, 436, 505
NmuCI GTSAC 2 cut(s) 275, 412
NotI GCGGCCGC 1 cut(s) 205
NspI RCATGY 2 cut(s) 68, 540
OliI CACNNNNGTG 1 cut(s) 191
PaqCI CACCTGC 1 cut(s) 446
PctI GAATGC 1 cut(s) 312
PdiI GCCGGC 1 cut(s) 321
PflFI GACNNNGTC 1 cut(s) 76
PkrI GCNGC 6 cut(s) 70, 206, 209, 349, 460, 492
PleI GAGTC 2 cut(s) 272, 409
PpsI GAGTC 2 cut(s) 272, 409
Ppu21I YACGTR 1 cut(s) 687
PshAI GACNNNNGTC 1 cut(s) 282
PspN4I GGNNCC 4 cut(s) 195, 218, 436, 505
PspOMI GGGCCC 1 cut(s) 216
PspPI GGNCC 4 cut(s) 216, 217, 504, 698
PsyI GACNNNGTC 1 cut(s) 76
RsaI GTAC 2 cut(s) 430, 563
RsaNI GTAC 2 cut(s) 429, 562
RseI CAYNNNNRTG 2 cut(s) 191, 410
SaqAI TTAA 2 cut(s) 38, 543
SatI GCNGC 6 cut(s) 69, 205, 208, 348, 459, 491
Sau96I GGNCC 4 cut(s) 216, 217, 504, 698
ScaI AGTACT 1 cut(s) 563
SchI GAGTC 2 cut(s) 272, 409
SduI GDGCHC 2 cut(s) 64, 220
SfaNI GCATC 2 cut(s) 170, 218
SinI GGWCC 2 cut(s) 504, 698
SmiMI CAYNNNNRTG 2 cut(s) 191, 410
SmlI CTYRAG 2 cut(s) 529, 579
SmoI CTYRAG 2 cut(s) 529, 579
Sse9I AATT 5 cut(s) 91, 134, 335, 545, 610
SsiI CCGC 9 cut(s) 204, 208, 267, 317, 332, 354, 426, 458, 575
SspMI CTAG 5 cut(s) 14, 171, 182, 225, 473
StyI CCWWGG 1 cut(s) 197
TaaI ACNGT 5 cut(s) 106, 275, 302, 561, 566
TaiI ACGT 2 cut(s) 468, 689
TaqI TCGA 1 cut(s) 153
TasI AATT 5 cut(s) 91, 134, 335, 545, 610
TatI WGTACW 1 cut(s) 561
TauI GCSGC 3 cut(s) 207, 210, 461
Tru1I TTAA 2 cut(s) 38, 543
Tru9I TTAA 2 cut(s) 38, 543
TscAI CASTG 1 cut(s) 697
TseFI GTSAC 2 cut(s) 275, 412
TseI GCWGC 3 cut(s) 68, 347, 490
Tsp45I GTSAC 2 cut(s) 275, 412
TspDTI ATGAA 3 cut(s) 20, 39, 645
TspGWI ACGGA 1 cut(s) 251
TspRI CASTG 1 cut(s) 697
Tth111I GACNNNGTC 1 cut(s) 76
VneI GTGCAC 1 cut(s) 60
VpaK11BI GGWCC 2 cut(s) 504, 698
XapI RAATTY 2 cut(s) 335, 545
XceI RCATGY 2 cut(s) 68, 540
XspI CTAG 5 cut(s) 14, 171, 182, 225, 473
ZrmI AGTACT 1 cut(s) 563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.