Prupe.7G050800_v2.0.a1

Belongs to the sterol desaturase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
8810193 .. 8811503
1311 bp
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UTR
Exon/CDS
Intron
Prupe.7G050800.1

Sequence Viewer

Length: 261 bp
ATGGAGAGAGAGACAGAGAGACAGAGATACAGAGAGAAGGAACACAATCTTCAAAACCTTCCCTTGTGGAACACAATCGGCTTTATTTCAACACTGGTACTGCACGTGGGAGTTTCAGAGCCTTTATATTACTGGATGCATAGACGTTTCCATGGCAACTACTTTTTTGAAAACTATCATTCACTTCACCGTTCCTCTCCTCTCCAATACCACTGCCCTTTACAGCTGGAAGTGCAACACTTCTGGAGCATCTGGTTTTAA

Protein Analysis

87

Amino Acids

10.81

Weight (kDa)

7.1

Isoelectric Point (pI)

63.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028517)

Species Orthologous Gene IDs
malus_domestica MD16G1261900.v1.1
prunus_persica Prupe.7G050800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcvI CACGTG 1 cut(s) 106
AfaI GTAC 1 cut(s) 99
AgsI TTSAA 3 cut(s) 53, 90, 170
AluBI AGCT 1 cut(s) 226
AluI AGCT 1 cut(s) 226
Alw26I GTCTC 2 cut(s) 5, 13
AsuHPI GGTGA 1 cut(s) 179
BbrPI CACGTG 1 cut(s) 106
BcoDI GTCTC 2 cut(s) 5, 13
BmsI GCATC 1 cut(s) 126
BsaAI YACGTR 1 cut(s) 106
BsaJI CCNNGG 1 cut(s) 151
Bse1I ACTGG 2 cut(s) 99, 137
BseDI CCNNGG 1 cut(s) 151
BseGI GGATG 1 cut(s) 141
BseNI ACTGG 2 cut(s) 99, 137
BseRI GAGGAG 1 cut(s) 189
BsgI GTGCAG 1 cut(s) 86
BsmAI GTCTC 2 cut(s) 5, 13
Bsp19I CCATGG 1 cut(s) 151
BsrI ACTGG 2 cut(s) 99, 137
BssECI CCNNGG 1 cut(s) 151
BssT1I CCWWGG 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 191
BstBAI YACGTR 1 cut(s) 106
BstDSI CCRYGG 1 cut(s) 151
BstF5I GGATG 1 cut(s) 141
BstMAI GTCTC 2 cut(s) 5, 13
BstMWI GCNNNNNNNGC 1 cut(s) 232
BtgI CCRYGG 1 cut(s) 151
BtsCI GGATG 1 cut(s) 141
BtsI GCAGTG 1 cut(s) 211
BtsIMutI CAGTG 2 cut(s) 92, 211
Csp6I GTAC 1 cut(s) 98
CviAII CATG 1 cut(s) 152
CviJI RGCY 3 cut(s) 81, 121, 226
CviKI_1 RGCY 3 cut(s) 81, 121, 226
CviQI GTAC 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 151
Eco72I CACGTG 1 cut(s) 106
EcoT14I CCWWGG 1 cut(s) 151
EcoT22I ATGCAT 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 151
FaeI CATG 1 cut(s) 155
FaiI YATR 3 cut(s) 127, 141, 153
FatI CATG 1 cut(s) 151
FokI GGATG 1 cut(s) 148
Hin1II CATG 1 cut(s) 155
HphI GGTGA 1 cut(s) 179
Hpy188I TCNGA 1 cut(s) 118
Hpy188III TCNNGA 1 cut(s) 244
HpyAV CCTTC 2 cut(s) 31, 68
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4IV ACGT 2 cut(s) 105, 145
HpyCH4V TGCA 3 cut(s) 103, 139, 235
HpyF10VI GCNNNNNNNGC 1 cut(s) 232
HpySE526I ACGT 2 cut(s) 105, 145
Hsp92II CATG 1 cut(s) 155
LmnI GCTCC 1 cut(s) 246
LpnPI CCDG 5 cut(s) 80, 118, 212, 229, 238
LweI GCATC 1 cut(s) 126
MaeII ACGT 2 cut(s) 105, 145
MboII GAAGA 1 cut(s) 41
MnlI CCTC 2 cut(s) 205, 210
Mph1103I ATGCAT 1 cut(s) 141
MseI TTAA 1 cut(s) 259
MspA1I CMGCKG 1 cut(s) 226
MwoI GCNNNNNNNGC 1 cut(s) 232
NcoI CCATGG 1 cut(s) 151
NlaIII CATG 1 cut(s) 155
NsiI ATGCAT 1 cut(s) 141
PmaCI CACGTG 1 cut(s) 106
PmlI CACGTG 1 cut(s) 106
Ppu21I YACGTR 1 cut(s) 106
PspCI CACGTG 1 cut(s) 106
PvuII CAGCTG 1 cut(s) 226
RsaI GTAC 1 cut(s) 99
RsaNI GTAC 1 cut(s) 98
SaqAI TTAA 1 cut(s) 259
SetI ASST 4 cut(s) 60, 108, 148, 228
SfaNI GCATC 1 cut(s) 126
SgeI CNNG 8 cut(s) 76, 107, 116, 118, 145, 164, 239, 256
StyI CCWWGG 1 cut(s) 151
TaaI ACNGT 1 cut(s) 191
TaiI ACGT 2 cut(s) 108, 148
Tru1I TTAA 1 cut(s) 259
Tru9I TTAA 1 cut(s) 259
TscAI CASTG 2 cut(s) 99, 218
TspRI CASTG 2 cut(s) 99, 218
Zsp2I ATGCAT 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.