Prupe.7G147000_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
16004287 .. 16004881
595 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G147000.1

Sequence Viewer

Length: 405 bp
ATGGGAGAGTTGAAAGAAGAGAATATGGAAGTAGCAGCAGCTAGAAAGAGCTTCAAGAAGAGCTTTAGTCGCAGTAAAAGTACCAGGTGCATCGACGCTGCCCAAATCAACCCTACAAATATAAGCTTTGGGAAAATCTACCCGTGCCCCGAAGCAGACAAAGCACTTTTTAGAAGTTTAAGTGTGGTGGATATTAATAGGGAGAGGAAGATCGCTCATTCTGCATCTTTGCCTTCTCATTTGTCTACTCCTCGTCATGATTTTGACTACCGTTCTTCAAGACGGATATTCATCGGAAGCTACCCTTTCAACAAGAAAGTTGAAAAAACGTTGTCGTTTTCGAAGATAAGGAAGTGGTTACCGTTGTTGTTTTCAAGAGAAAAAAGAAAAAAAAGAGTGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

135

Amino Acids

15.54

Weight (kDa)

10.41

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029094)

Species Orthologous Gene IDs
prunus_persica Prupe.7G147000_v2.0.a1
pyrus_communis pycom02g12370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 245
AclI AACGTT 1 cut(s) 329
AfaI GTAC 1 cut(s) 82
AgsI TTSAA 6 cut(s) 13, 55, 279, 310, 323, 375
AjnI CCWGG 1 cut(s) 83
AluBI AGCT 5 cut(s) 41, 51, 63, 126, 300
AluI AGCT 5 cut(s) 41, 51, 63, 126, 300
ApeKI GCWGC 3 cut(s) 35, 38, 98
AseI ATTAAT 1 cut(s) 195
AsuII TTCGAA 1 cut(s) 341
BaeGI GKGCMC 1 cut(s) 149
BbvI GCAGC 3 cut(s) 47, 50, 85
BciT130I CCWGG 1 cut(s) 85
BfaI CTAG 1 cut(s) 42
BisI GCNGC 3 cut(s) 36, 39, 99
BlsI GCNGC 3 cut(s) 37, 40, 100
Bme1390I CCNGG 1 cut(s) 85
BmrFI CCNGG 1 cut(s) 85
BmsI GCATC 2 cut(s) 99, 233
Bpu14I TTCGAA 1 cut(s) 341
BsaBI GATNNNNATC 1 cut(s) 290
Bse8I GATNNNNATC 1 cut(s) 290
BseBI CCWGG 1 cut(s) 85
BseJI GATNNNNATC 1 cut(s) 290
BseRI GAGGAG 1 cut(s) 240
BseSI GKGCMC 1 cut(s) 149
BseXI GCAGC 3 cut(s) 47, 50, 85
Bsp119I TTCGAA 1 cut(s) 341
Bsp1286I GDGCHC 1 cut(s) 149
Bsp143I GATC 1 cut(s) 210
BspHI TCATGA 1 cut(s) 256
BspQI GCTCTTC 1 cut(s) 53
BspT104I TTCGAA 1 cut(s) 341
BssMI GATC 1 cut(s) 210
Bst2UI CCWGG 1 cut(s) 85
Bst4CI ACNGT 2 cut(s) 272, 363
Bst6I CTCTTC 2 cut(s) 12, 53
BstBI TTCGAA 1 cut(s) 341
BstEII GGTNACC 1 cut(s) 357
BstKTI GATC 1 cut(s) 213
BstMBI GATC 1 cut(s) 210
BstMWI GCNNNNNNNGC 3 cut(s) 69, 161, 221
BstNI CCWGG 1 cut(s) 85
BstPI GGTNACC 1 cut(s) 357
BstSCI CCNGG 1 cut(s) 83
BstSLI GKGCMC 1 cut(s) 149
BstV1I GCAGC 3 cut(s) 47, 50, 85
CciI TCATGA 1 cut(s) 256
CseI GACGC 1 cut(s) 104
CsiI ACCWGGT 1 cut(s) 83
Csp6I GTAC 1 cut(s) 81
CviAII CATG 1 cut(s) 257
CviJI RGCY 5 cut(s) 41, 51, 63, 126, 300
CviKI_1 RGCY 5 cut(s) 41, 51, 63, 126, 300
CviQI GTAC 1 cut(s) 81
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
Eam1104I CTCTTC 2 cut(s) 12, 53
EarI CTCTTC 2 cut(s) 12, 53
Eco91I GGTNACC 1 cut(s) 357
EcoO65I GGTNACC 1 cut(s) 357
EcoRII CCWGG 1 cut(s) 83
FaeI CATG 1 cut(s) 260
FaiI YATR 3 cut(s) 26, 122, 258
FalI AAGNNNNNCTT 4 cut(s) 47, 79, 289, 321
FatI CATG 1 cut(s) 256
FblI GTMKAC 1 cut(s) 245
Fnu4HI GCNGC 3 cut(s) 36, 39, 99
Fsp4HI GCNGC 3 cut(s) 36, 39, 99
FspBI CTAG 1 cut(s) 42
GluI GCNGC 3 cut(s) 36, 39, 99
HgaI GACGC 1 cut(s) 104
Hin1II CATG 1 cut(s) 260
HindIII AAGCTT 1 cut(s) 124
Hpy166II GTNNAC 1 cut(s) 246
Hpy188I TCNGA 1 cut(s) 296
Hpy188III TCNNGA 4 cut(s) 55, 257, 279, 375
Hpy8I GTNNAC 1 cut(s) 246
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 1 cut(s) 243
HpyCH4III ACNGT 2 cut(s) 272, 363
HpyCH4IV ACGT 1 cut(s) 329
HpyCH4V TGCA 2 cut(s) 90, 224
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 161, 221
HpySE526I ACGT 1 cut(s) 329
Hsp92II CATG 1 cut(s) 260
Kzo9I GATC 1 cut(s) 210
LguI GCTCTTC 1 cut(s) 53
LpnPI CCDG 2 cut(s) 70, 97
Lsp1109I GCAGC 3 cut(s) 47, 50, 85
LweI GCATC 2 cut(s) 99, 233
MabI ACCWGGT 1 cut(s) 83
MaeI CTAG 1 cut(s) 42
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 1 cut(s) 357
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 5 cut(s) 29, 70, 220, 267, 355
MhlI GDGCHC 1 cut(s) 149
MnlI CCTC 2 cut(s) 198, 261
MseI TTAA 3 cut(s) 179, 195, 403
MspR9I CCNGG 1 cut(s) 85
MvaI CCWGG 1 cut(s) 85
MwoI GCNNNNNNNGC 3 cut(s) 69, 161, 221
NdeII GATC 1 cut(s) 210
NlaIII CATG 1 cut(s) 260
NspV TTCGAA 1 cut(s) 341
PagI TCATGA 1 cut(s) 256
PciSI GCTCTTC 1 cut(s) 53
PkrI GCNGC 3 cut(s) 37, 40, 100
PshBI ATTAAT 1 cut(s) 195
Psp1406I AACGTT 1 cut(s) 329
Psp6I CCWGG 1 cut(s) 83
PspEI GGTNACC 1 cut(s) 357
PspGI CCWGG 1 cut(s) 83
RsaI GTAC 1 cut(s) 82
RsaNI GTAC 1 cut(s) 81
SapI GCTCTTC 1 cut(s) 53
SaqAI TTAA 3 cut(s) 179, 195, 403
SatI GCNGC 3 cut(s) 36, 39, 99
Sau3AI GATC 1 cut(s) 210
ScrFI CCNGG 1 cut(s) 85
SduI GDGCHC 1 cut(s) 149
SetI ASST 7 cut(s) 43, 53, 65, 89, 128, 302, 332
SexAI ACCWGGT 1 cut(s) 83
SfaNI GCATC 2 cut(s) 99, 233
SfuI TTCGAA 1 cut(s) 341
SspMI CTAG 1 cut(s) 42
StyD4I CCNGG 1 cut(s) 83
TaaI ACNGT 2 cut(s) 272, 363
TaiI ACGT 1 cut(s) 332
TaqI TCGA 2 cut(s) 93, 341
Tru1I TTAA 3 cut(s) 179, 195, 403
Tru9I TTAA 3 cut(s) 179, 195, 403
TseI GCWGC 3 cut(s) 35, 38, 98
TspDTI ATGAA 1 cut(s) 280
TspGWI ACGGA 1 cut(s) 298
VspI ATTAAT 1 cut(s) 195
XmiI GTMKAC 1 cut(s) 245
XspI CTAG 1 cut(s) 42
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.