PAN-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.7G107200_v2.0.a1 Prupe.7G184800_v2.0.a1 Prupe.7G208800_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 77 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 197 |
| AgsI | TTSAA | 2 cut(s) | 124, 181 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 47, 79 |
| AluBI | AGCT | 3 cut(s) | 63, 103, 230 |
| AluI | AGCT | 3 cut(s) | 63, 103, 230 |
| Alw26I | GTCTC | 1 cut(s) | 88 |
| AlwI | GGATC | 1 cut(s) | 77 |
| ApeKI | GCWGC | 2 cut(s) | 6, 9 |
| BcoDI | GTCTC | 1 cut(s) | 88 |
| BfaI | CTAG | 1 cut(s) | 144 |
| BfmI | CTRYAG | 1 cut(s) | 225 |
| BisI | GCNGC | 2 cut(s) | 7, 10 |
| BlsI | GCNGC | 2 cut(s) | 8, 11 |
| Bpu10I | CCTNAGC | 1 cut(s) | 99 |
| BsaI | GGTCTC | 1 cut(s) | 88 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 197 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 197 |
| BseMII | CTCAG | 1 cut(s) | 90 |
| BseRI | GAGGAG | 1 cut(s) | 106 |
| BsiSI | CCGG | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 197 |
| BsmAI | GTCTC | 1 cut(s) | 88 |
| Bso31I | GGTCTC | 1 cut(s) | 88 |
| Bsp143I | GATC | 1 cut(s) | 82 |
| BspCNI | CTCAG | 1 cut(s) | 91 |
| BspPI | GGATC | 1 cut(s) | 77 |
| BspTNI | GGTCTC | 1 cut(s) | 88 |
| BssMI | GATC | 1 cut(s) | 82 |
| Bst6I | CTCTTC | 1 cut(s) | 176 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstKTI | GATC | 1 cut(s) | 85 |
| BstMAI | GTCTC | 1 cut(s) | 88 |
| BstMBI | GATC | 1 cut(s) | 82 |
| BstSFI | CTRYAG | 1 cut(s) | 225 |
| BtsIMutI | CAGTG | 1 cut(s) | 140 |
| CseI | GACGC | 1 cut(s) | 126 |
| CviAII | CATG | 2 cut(s) | 49, 167 |
| CviJI | RGCY | 5 cut(s) | 6, 63, 103, 151, 230 |
| CviKI_1 | RGCY | 5 cut(s) | 6, 63, 103, 151, 230 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| DpnI | GATC | 1 cut(s) | 84 |
| DpnII | GATC | 1 cut(s) | 82 |
| Eam1104I | CTCTTC | 1 cut(s) | 176 |
| EarI | CTCTTC | 1 cut(s) | 176 |
| Eco31I | GGTCTC | 1 cut(s) | 88 |
| FaeI | CATG | 2 cut(s) | 52, 170 |
| FaiI | YATR | 5 cut(s) | 42, 50, 168, 188, 227 |
| FatI | CATG | 2 cut(s) | 48, 166 |
| Fnu4HI | GCNGC | 2 cut(s) | 7, 10 |
| Fsp4HI | GCNGC | 2 cut(s) | 7, 10 |
| FspBI | CTAG | 1 cut(s) | 144 |
| GluI | GCNGC | 2 cut(s) | 7, 10 |
| HapII | CCGG | 1 cut(s) | 86 |
| HgaI | GACGC | 1 cut(s) | 126 |
| Hin1II | CATG | 2 cut(s) | 52, 170 |
| HindIII | AAGCTT | 1 cut(s) | 61 |
| HpaII | CCGG | 1 cut(s) | 86 |
| Hpy188I | TCNGA | 2 cut(s) | 210, 219 |
| Hpy188III | TCNNGA | 1 cut(s) | 240 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| Hsp92II | CATG | 2 cut(s) | 52, 170 |
| Kzo9I | GATC | 1 cut(s) | 82 |
| LpnPI | CCDG | 3 cut(s) | 99, 111, 179 |
| MaeI | CTAG | 1 cut(s) | 144 |
| MaeIII | GTNAC | 1 cut(s) | 30 |
| MalI | GATC | 1 cut(s) | 84 |
| MboI | GATC | 1 cut(s) | 82 |
| MboII | GAAGA | 2 cut(s) | 32, 193 |
| MnlI | CCTC | 3 cut(s) | 84, 140, 190 |
| MspI | CCGG | 1 cut(s) | 86 |
| NdeII | GATC | 1 cut(s) | 82 |
| NlaIII | CATG | 2 cut(s) | 52, 170 |
| PkrI | GCNGC | 2 cut(s) | 8, 11 |
| SatI | GCNGC | 2 cut(s) | 7, 10 |
| Sau3AI | GATC | 1 cut(s) | 82 |
| SetI | ASST | 4 cut(s) | 65, 100, 105, 232 |
| SfcI | CTRYAG | 1 cut(s) | 225 |
| SgeI | CNNG | 9 cut(s) | 61, 76, 98, 102, 110, 116, 156, 179, 206 |
| SspI | AATATT | 1 cut(s) | 127 |
| SspMI | CTAG | 1 cut(s) | 144 |
| TscAI | CASTG | 1 cut(s) | 140 |
| TseI | GCWGC | 2 cut(s) | 6, 9 |
| TspDTI | ATGAA | 1 cut(s) | 37 |
| TspRI | CASTG | 1 cut(s) | 140 |
| XspI | CTAG | 1 cut(s) | 144 |