Prupe.7G190200_v2.0.a1

Staphylococcal nuclease domain-containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
18226567 .. 18227344
778 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G190200.1

Sequence Viewer

Length: 339 bp
ATGGACGTAATAGACTTGTCAAATATTGCCTTCTCACTTTGTGGTGTCACATGGCCCAGAGGTAAAGAGCCTTATGCAGATGAAGCATTTGAACTACTGAGGCAAACCATACTTCATACAAAAGTGGAGGTTCTATTGGATACTGTTGATGGAGATGGATATTTCATTGGAACATTATCGGCGTCAAATACCCATGTAGCAATCCCCCTCCTTCAAGCTGGCCTTGCAAAATTGGAAGAAAATTTTCCCAAAGCTTATAGTACCGAATCTAATAATGCTCAGAAATATGCAAGAGAGAAGAAATTGAAAATTTGGGAGACTTGTGTTGAAACATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006629 GO:0006720 GO:0006721 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009056 GO:0009057 GO:0009058 GO:0009266 GO:0009408 GO:0009506 GO:0009507 GO:0009536 GO:0009628 GO:0009651 GO:0009685 GO:0009686 GO:0009791 GO:0009845 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0010035 GO:0010038 GO:0010371 GO:0010372 GO:0010467 GO:0010468 GO:0010494 GO:0010565 GO:0010605 GO:0010629 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016070 GO:0016071 GO:0016101 GO:0016102 GO:0016114 GO:0016787 GO:0016788 GO:0019216 GO:0019222 GO:0019439 GO:0019747 GO:0019752 GO:0030054 GO:0030312 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031967 GO:0031975 GO:0032350 GO:0032352 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034605 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043436 GO:0043455 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044260 GO:0044265 GO:0044270 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045828 GO:0045834 GO:0046394 GO:0046483 GO:0046686 GO:0046700 GO:0046885 GO:0046886 GO:0046889 GO:0046890 GO:0048518 GO:0048519 GO:0048522 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060255 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1901576 GO:1990904
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.48

Weight (kDa)

4.94

Isoelectric Point (pI)

19.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029095)

Species Orthologous Gene IDs
prunus_persica Prupe.7G189900_v2.0.a1 Prupe.7G190200_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 241, 309
AcyI GRCGYC 1 cut(s) 182
AdeI CACNNNGTG 1 cut(s) 41
AfaI GTAC 1 cut(s) 262
AgsI TTSAA 4 cut(s) 92, 215, 307, 329
AluBI AGCT 2 cut(s) 218, 254
AluI AGCT 2 cut(s) 218, 254
Alw26I GTCTC 1 cut(s) 311
AoxI GGCC 2 cut(s) 53, 220
ApoI RAATTY 2 cut(s) 241, 309
Asp700I GAANNNNTTC 1 cut(s) 243
AspS9I GGNCC 1 cut(s) 54
BccI CCATC 2 cut(s) 143, 149
BciVI GTATCC 1 cut(s) 133
BcoDI GTCTC 1 cut(s) 311
BfuI GTATCC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 54
BsaHI GRCGYC 1 cut(s) 182
BseMII CTCAG 2 cut(s) 89, 293
BshFI GGCC 2 cut(s) 55, 222
BsmAI GTCTC 1 cut(s) 311
BsnI GGCC 2 cut(s) 55, 222
BspANI GGCC 2 cut(s) 55, 222
BspCNI CTCAG 2 cut(s) 90, 292
BssNI GRCGYC 1 cut(s) 182
Bst4CI ACNGT 1 cut(s) 145
BstACI GRCGYC 1 cut(s) 182
BstC8I GCNNGC 1 cut(s) 220
BstDEI CTNAG 3 cut(s) 98, 279, 336
BstMAI GTCTC 1 cut(s) 311
BstMWI GCNNNNNNNGC 2 cut(s) 83, 224
BsuI GTATCC 1 cut(s) 133
BsuRI GGCC 2 cut(s) 55, 222
Cac8I GCNNGC 1 cut(s) 220
Cfr13I GGNCC 1 cut(s) 54
CseI GACGC 1 cut(s) 171
Csp6I GTAC 1 cut(s) 261
CviAII CATG 2 cut(s) 51, 194
CviJI RGCY 5 cut(s) 55, 70, 218, 222, 254
CviKI_1 RGCY 5 cut(s) 55, 70, 218, 222, 254
CviQI GTAC 1 cut(s) 261
DdeI CTNAG 3 cut(s) 98, 279, 336
DraIII CACNNNGTG 1 cut(s) 41
FaeI CATG 2 cut(s) 54, 197
FaiI YATR 7 cut(s) 52, 75, 110, 117, 195, 258, 288
FalI AAGNNNNNCTT 2 cut(s) 207, 239
FatI CATG 2 cut(s) 50, 193
HaeIII GGCC 2 cut(s) 55, 222
HgaI GACGC 1 cut(s) 171
Hin1I GRCGYC 1 cut(s) 182
Hin1II CATG 2 cut(s) 54, 197
HindIII AAGCTT 1 cut(s) 252
HinfI GANTC 1 cut(s) 266
Hpy188I TCNGA 1 cut(s) 282
HpyAV CCTTC 2 cut(s) 40, 221
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 3 cut(s) 77, 227, 290
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 224
HpyF3I CTNAG 3 cut(s) 98, 279, 336
HpySE526I ACGT 1 cut(s) 6
Hsp92I GRCGYC 1 cut(s) 182
Hsp92II CATG 2 cut(s) 54, 197
LpnPI CCDG 2 cut(s) 70, 204
MaeII ACGT 1 cut(s) 6
MaeIII GTNAC 1 cut(s) 46
MboII GAAGA 2 cut(s) 248, 310
MluCI AATT 4 cut(s) 230, 241, 302, 309
MnlI CCTC 4 cut(s) 53, 93, 121, 218
MroXI GAANNNNTTC 1 cut(s) 243
MwoI GCNNNNNNNGC 2 cut(s) 83, 224
NlaIII CATG 2 cut(s) 54, 197
NmuCI GTSAC 1 cut(s) 46
PdmI GAANNNNTTC 1 cut(s) 243
PfeI GAWTC 1 cut(s) 266
PspPI GGNCC 1 cut(s) 54
RsaI GTAC 1 cut(s) 262
RsaNI GTAC 1 cut(s) 261
Sau96I GGNCC 1 cut(s) 54
SetI ASST 5 cut(s) 9, 64, 132, 220, 256
SgeI CNNG 9 cut(s) 28, 63, 69, 206, 227, 231, 236, 303, 333
Sse9I AATT 4 cut(s) 230, 241, 302, 309
SspI AATATT 1 cut(s) 25
TaaI ACNGT 1 cut(s) 145
TaiI ACGT 1 cut(s) 9
TasI AATT 4 cut(s) 230, 241, 302, 309
TfiI GAWTC 1 cut(s) 266
TseFI GTSAC 1 cut(s) 46
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 3 cut(s) 96, 104, 154
XapI RAATTY 2 cut(s) 241, 309
XmnI GAANNNNTTC 1 cut(s) 243
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.