Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0029092

Physical Location & Seq

Genomic Coordinates Forward (+)

18605659 .. 18606231

Gene Structure 573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G197600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 483 bp

ATGTCTGAGCTCTTAAAGCAACCACACCTCATCGAAAAGGCAACCGAAGAGCTTGATAGAGTAATTGGGAGAAACAGATGGGTAGAAGAGAGAGACCTTGAACAACTTCCTTATGTAGATGCAATTATGAAAGAGACAATGAGGAAGCACCCAGTTGCTGTAATGCTAGCTCCACATCTAGCTCTTGAAGATTGCAATGCGGGAGGTTATGATATTTGCAAAGGAACTAGAGTGTTCATTAACACATGGAGCATGGGGAGAGACCCTTCACTATGGGATGCACCAGATGAGTTTAGGCCTGAGAGGTTCTTAGGGAAGGCCATTGATGTGAAGGGGCAGAGTTTTGAACTGCTTCCATTTGGCTCAGGAAGGAGGATGTGCCCTGAAGACTTGAACATGGAGGAAGTTTTTGGATTGACAACACCTCGAAAGTTTCCGCTTGTTGCAGTCATGGAGCCTCGGCTCCCAACCCATCTTTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000302 GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0032870 GO:0033554 GO:0034599 GO:0034614 GO:0035690 GO:0042221 GO:0042493 GO:0044550 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0071731 GO:0071732 GO:0097366 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00905 ko01100 ko01110 map00905 map01100 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

161

Amino Acids

18.44

Weight (kDa)

5.43

Isoelectric Point (pI)

52.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029092)

Species	Orthologous Gene IDs
prunus_persica	Prupe.7G197600_v2.0.a1
rosa_multiflora	Rmu_co8131062.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	200, 437
AcuI	CTGAAG	1 cut(s)	405
AgsI	TTSAA	4 cut(s)	101, 188, 347, 394
AluBI	AGCT	4 cut(s)	10, 52, 170, 182
AluI	AGCT	4 cut(s)	10, 52, 170, 182
Alw21I	GWGCWC	1 cut(s)	12
Alw26I	GTCTC	3 cut(s)	87, 128, 255
AlwNI	CAGNNNCTG	1 cut(s)	158
AoxI	GGCC	2 cut(s)	296, 318
Asp700I	GAANNNNTTC	2 cut(s)	105, 351
AsuNHI	GCTAGC	1 cut(s)	166
BaeGI	GKGCMC	1 cut(s)	383
BanII	GRGCYC	1 cut(s)	12
BbsI	GAAGAC	1 cut(s)	393
Bbv12I	GWGCWC	1 cut(s)	12
BccI	CCATC	2 cut(s)	72, 480
BcoDI	GTCTC	3 cut(s)	87, 128, 255
BfaI	CTAG	3 cut(s)	167, 179, 228
BmiI	GGNNCC	2 cut(s)	456, 464
BmrI	ACTGGG	1 cut(s)	146
BmsI	GCATC	2 cut(s)	109, 268
BmtI	GCTAGC	1 cut(s)	170
BmuI	ACTGGG	1 cut(s)	146
BpiI	GAAGAC	1 cut(s)	393
Bpu10I	CCTNAGC	1 cut(s)	364
BsaI	GGTCTC	2 cut(s)	87, 255
BsaJI	CCNNGG	1 cut(s)	458
Bse1I	ACTGG	1 cut(s)	152
Bse3DI	GCAATG	1 cut(s)	202
BseDI	CCNNGG	1 cut(s)	458
BseGI	GGATG	2 cut(s)	283, 381
BseMI	GCAATG	1 cut(s)	202
BseMII	CTCAG	2 cut(s)	291, 378
BseNI	ACTGG	1 cut(s)	152
BseSI	GKGCMC	1 cut(s)	383
BshFI	GGCC	2 cut(s)	298, 320
BsiHKAI	GWGCWC	1 cut(s)	12
BsmAI	GTCTC	3 cut(s)	87, 128, 255
BsnI	GGCC	2 cut(s)	298, 320
Bso31I	GGTCTC	2 cut(s)	87, 255
Bsp1286I	GDGCHC	2 cut(s)	12, 383
BspACI	CCGC	2 cut(s)	200, 437
BspANI	GGCC	2 cut(s)	298, 320
BspCNI	CTCAG	2 cut(s)	292, 377
BspLI	GGNNCC	2 cut(s)	456, 464
BspOI	GCTAGC	1 cut(s)	170
BspQI	GCTCTTC	1 cut(s)	42
BspTNI	GGTCTC	2 cut(s)	87, 255
BsrDI	GCAATG	1 cut(s)	202
BsrI	ACTGG	1 cut(s)	152
BssECI	CCNNGG	1 cut(s)	458
Bst6I	CTCTTC	2 cut(s)	42, 81
BstC8I	GCNNGC	1 cut(s)	168
BstDEI	CTNAG	4 cut(s)	6, 300, 310, 364
BstF5I	GGATG	2 cut(s)	283, 381
BstMAI	GTCTC	3 cut(s)	87, 128, 255
BstMWI	GCNNNNNNNGC	1 cut(s)	16
BstSLI	GKGCMC	1 cut(s)	383
BstV2I	GAAGAC	1 cut(s)	393
BsuRI	GGCC	2 cut(s)	298, 320
BtsCI	GGATG	2 cut(s)	283, 381
Cac8I	GCNNGC	1 cut(s)	168
CaiI	CAGNNNCTG	1 cut(s)	158
CviAII	CATG	4 cut(s)	246, 253, 397, 451
CviJI	RGCY	9 cut(s)	10, 52, 170, 182, 298, 320, 363, 457, 463
CviKI_1	RGCY	9 cut(s)	10, 52, 170, 182, 298, 320, 363, 457, 463
DdeI	CTNAG	4 cut(s)	6, 300, 310, 364
Eam1104I	CTCTTC	2 cut(s)	42, 81
EarI	CTCTTC	2 cut(s)	42, 81
Ecl136II	GAGCTC	1 cut(s)	10
Eco147I	AGGCCT	1 cut(s)	298
Eco24I	GRGCYC	1 cut(s)	12
Eco31I	GGTCTC	2 cut(s)	87, 255
Eco53kI	GAGCTC	1 cut(s)	10
Eco57I	CTGAAG	1 cut(s)	405
EcoICRI	GAGCTC	1 cut(s)	10
EcoT38I	GRGCYC	1 cut(s)	12
FaeI	CATG	4 cut(s)	249, 256, 400, 454
FaiI	YATR	8 cut(s)	114, 128, 210, 247, 254, 274, 398, 452
FatI	CATG	4 cut(s)	245, 252, 396, 450
FauI	CCCGC	1 cut(s)	193
FokI	GGATG	2 cut(s)	290, 388
FriOI	GRGCYC	1 cut(s)	12
FspBI	CTAG	3 cut(s)	167, 179, 228
HaeIII	GGCC	2 cut(s)	298, 320
Hin1II	CATG	4 cut(s)	249, 256, 400, 454
Hpy188I	TCNGA	1 cut(s)	7
Hpy188III	TCNNGA	2 cut(s)	185, 366
HpyAV	CCTTC	4 cut(s)	276, 310, 325, 363
HpyCH4V	TGCA	5 cut(s)	122, 195, 219, 281, 446
HpyF10VI	GCNNNNNNNGC	1 cut(s)	16
HpyF3I	CTNAG	4 cut(s)	6, 300, 310, 364
Hsp92II	CATG	4 cut(s)	249, 256, 400, 454
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	4 cut(s)	175, 249, 454, 468
LpnPI	CCDG	5 cut(s)	165, 297, 312, 351, 396
LweI	GCATC	2 cut(s)	109, 268
MaeI	CTAG	3 cut(s)	167, 179, 228
MboII	GAAGA	4 cut(s)	59, 98, 200, 398
MhlI	GDGCHC	2 cut(s)	12, 383
MluCI	AATT	2 cut(s)	63, 123
MnlI	CCTC	8 cut(s)	38, 135, 197, 297, 366, 394, 435, 468
MroXI	GAANNNNTTC	2 cut(s)	105, 351
MseI	TTAA	3 cut(s)	14, 240, 481
MslI	CAYNNNNRTG	1 cut(s)	326
MwoI	GCNNNNNNNGC	1 cut(s)	16
NheI	GCTAGC	1 cut(s)	166
NlaIII	CATG	4 cut(s)	249, 256, 400, 454
NlaIV	GGNNCC	2 cut(s)	456, 464
NmeAIII	GCCGAG	1 cut(s)	439
PceI	AGGCCT	1 cut(s)	298
PciSI	GCTCTTC	1 cut(s)	42
PdmI	GAANNNNTTC	2 cut(s)	105, 351
Psp124BI	GAGCTC	1 cut(s)	12
PspN4I	GGNNCC	2 cut(s)	456, 464
PstNI	CAGNNNCTG	1 cut(s)	158
RseI	CAYNNNNRTG	1 cut(s)	326
SacI	GAGCTC	1 cut(s)	12
SapI	GCTCTTC	1 cut(s)	42
SaqAI	TTAA	3 cut(s)	14, 240, 481
SduI	GDGCHC	2 cut(s)	12, 383
SetI	ASST	9 cut(s)	12, 30, 54, 99, 172, 184, 208, 308, 427
SfaNI	GCATC	2 cut(s)	109, 268
SmiMI	CAYNNNNRTG	1 cut(s)	326
Sse9I	AATT	2 cut(s)	63, 123
SseBI	AGGCCT	1 cut(s)	298
SsiI	CCGC	2 cut(s)	200, 437
SspMI	CTAG	3 cut(s)	167, 179, 228
SstI	GAGCTC	1 cut(s)	12
StuI	AGGCCT	1 cut(s)	298
TaqI	TCGA	2 cut(s)	33, 427
TasI	AATT	2 cut(s)	63, 123
Tru1I	TTAA	3 cut(s)	14, 240, 481
Tru9I	TTAA	3 cut(s)	14, 240, 481
TspDTI	ATGAA	2 cut(s)	143, 226
XmnI	GAANNNNTTC	2 cut(s)	105, 351
XspI	CTAG	3 cut(s)	167, 179, 228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.