Prupe.7G225400_v2.0.a1

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
19993867 .. 19994654
788 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G225400.1

Sequence Viewer

Length: 342 bp
ATGCAAGTTGTGGCCTGCCCGCAGGTGCAATTTGTGTCCATTGAAGATATTCCAGAGAGCATTGTAACCAAGGAAAAAGAGCTTGAGAGGCAGAGGGAGGACCTTCTGTCAAAGCCTGAGAACATTAGAGAGAGAATTGTGGAGGGGAGGATCTCAAAGAGGCTTGGGGAGCTTGCTCTTTTAGAGCAACCTTTCATCAAAGATGATAGTCTTCTGGTGAAGGACCTAGTGAAGCAGACTGTTGCTGCTCTTGGGGAGAATATTAAAGTTCGCAGGTTTGTTCGGTTCACTCTTGGGGAGACAGTTGAGGACGCAAAAGCAGAAGCAGCAGCCGAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.77

Weight (kDa)

5.02

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029085)

Species Orthologous Gene IDs
prunus_persica Prupe.7G225400_v2.0.a1
pyrus_communis pycom09g14340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 13
Acc36I ACCTGC 2 cut(s) 13, 264
AciI CCGC 1 cut(s) 20
AclWI GGATC 1 cut(s) 158
AgsI TTSAA 1 cut(s) 44
AhdI GACNNNNNGTC 1 cut(s) 106
AluBI AGCT 3 cut(s) 82, 172, 338
AluI AGCT 3 cut(s) 82, 172, 338
Alw26I GTCTC 1 cut(s) 293
AlwI GGATC 1 cut(s) 158
AoxI GGCC 1 cut(s) 12
ApeKI GCWGC 3 cut(s) 245, 326, 329
Asp700I GAANNNNTTC 1 cut(s) 48
AspS9I GGNCC 2 cut(s) 100, 223
AsuHPI GGTGA 1 cut(s) 229
AvaII GGWCC 2 cut(s) 100, 223
BbsI GAAGAC 1 cut(s) 203
BbvI GCAGC 2 cut(s) 232, 338
BcoDI GTCTC 1 cut(s) 293
BfaI CTAG 1 cut(s) 227
BfuAI ACCTGC 2 cut(s) 13, 264
BisI GCNGC 3 cut(s) 246, 327, 330
BlsI GCNGC 3 cut(s) 247, 328, 331
Bme18I GGWCC 2 cut(s) 100, 223
BmeRI GACNNNNNGTC 1 cut(s) 106
BmgT120I GGNCC 2 cut(s) 100, 223
BpiI GAAGAC 1 cut(s) 203
BpuEI CTTGAG 1 cut(s) 104
BsaJI CCNNGG 1 cut(s) 69
BseDI CCNNGG 1 cut(s) 69
BseMII CTCAG 1 cut(s) 108
BseXI GCAGC 2 cut(s) 232, 338
BshFI GGCC 1 cut(s) 14
BsmAI GTCTC 1 cut(s) 293
BsnI GGCC 1 cut(s) 14
Bsp143I GATC 1 cut(s) 150
BspACI CCGC 1 cut(s) 20
BspANI GGCC 1 cut(s) 14
BspCNI CTCAG 1 cut(s) 109
BspMI ACCTGC 2 cut(s) 13, 264
BspPI GGATC 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 69
BssMI GATC 1 cut(s) 150
BssT1I CCWWGG 1 cut(s) 69
Bst4CI ACNGT 2 cut(s) 241, 304
BstC8I GCNNGC 3 cut(s) 16, 20, 174
BstDEI CTNAG 1 cut(s) 117
BstKTI GATC 1 cut(s) 153
BstMAI GTCTC 1 cut(s) 293
BstMBI GATC 1 cut(s) 150
BstMWI GCNNNNNNNGC 4 cut(s) 88, 169, 326, 335
BstV1I GCAGC 2 cut(s) 232, 338
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 1 cut(s) 150
BstYI RGATCY 1 cut(s) 150
BsuRI GGCC 1 cut(s) 14
BveI ACCTGC 2 cut(s) 13, 264
Cac8I GCNNGC 3 cut(s) 16, 20, 174
Cfr13I GGNCC 2 cut(s) 100, 223
CseI GACGC 1 cut(s) 320
CviJI RGCY 7 cut(s) 14, 82, 115, 163, 172, 332, 338
CviKI_1 RGCY 7 cut(s) 14, 82, 115, 163, 172, 332, 338
DdeI CTNAG 1 cut(s) 117
DpnI GATC 1 cut(s) 152
DpnII GATC 1 cut(s) 150
DriI GACNNNNNGTC 1 cut(s) 106
Eam1105I GACNNNNNGTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 69
Eco47I GGWCC 2 cut(s) 100, 223
EcoO109I RGGNCCY 2 cut(s) 100, 223
EcoT14I CCWWGG 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 69
FauI CCCGC 1 cut(s) 27
Fnu4HI GCNGC 3 cut(s) 246, 327, 330
Fsp4HI GCNGC 3 cut(s) 246, 327, 330
FspBI CTAG 1 cut(s) 227
GluI GCNGC 3 cut(s) 246, 327, 330
HaeIII GGCC 1 cut(s) 14
HgaI GACGC 1 cut(s) 320
HindIII AAGCTT 1 cut(s) 336
HphI GGTGA 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 288
Hpy188III TCNNGA 1 cut(s) 53
Hpy8I GTNNAC 1 cut(s) 288
HpyAV CCTTC 2 cut(s) 113, 214
HpyCH4III ACNGT 2 cut(s) 241, 304
HpyCH4V TGCA 2 cut(s) 4, 28
HpyF10VI GCNNNNNNNGC 4 cut(s) 88, 169, 326, 335
HpyF3I CTNAG 1 cut(s) 117
Kzo9I GATC 1 cut(s) 150
LmnI GCTCC 1 cut(s) 169
LpnPI CCDG 6 cut(s) 8, 28, 66, 129, 200, 259
Lsp1109I GCAGC 2 cut(s) 232, 338
MaeI CTAG 1 cut(s) 227
MaeIII GTNAC 1 cut(s) 64
MalI GATC 1 cut(s) 152
MboI GATC 1 cut(s) 150
MboII GAAGA 2 cut(s) 56, 203
MflI RGATCY 1 cut(s) 150
MluCI AATT 2 cut(s) 29, 135
MnlI CCTC 7 cut(s) 81, 87, 91, 136, 141, 153, 301
MroXI GAANNNNTTC 1 cut(s) 48
MseI TTAA 1 cut(s) 264
MwoI GCNNNNNNNGC 4 cut(s) 88, 169, 326, 335
NdeII GATC 1 cut(s) 150
PaqCI CACCTGC 1 cut(s) 13
PdmI GAANNNNTTC 1 cut(s) 48
PkrI GCNGC 3 cut(s) 247, 328, 331
PpuMI RGGWCCY 2 cut(s) 100, 223
Psp5II RGGWCCY 2 cut(s) 100, 223
PspPI GGNCC 2 cut(s) 100, 223
PspPPI RGGWCCY 2 cut(s) 100, 223
PsuI RGATCY 1 cut(s) 150
SaqAI TTAA 1 cut(s) 264
SatI GCNGC 3 cut(s) 246, 327, 330
Sau3AI GATC 1 cut(s) 150
Sau96I GGNCC 2 cut(s) 100, 223
SetI ASST 8 cut(s) 27, 84, 105, 174, 193, 228, 278, 340
SinI GGWCC 2 cut(s) 100, 223
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 2 cut(s) 29, 135
SsiI CCGC 1 cut(s) 20
SspI AATATT 1 cut(s) 262
SspMI CTAG 1 cut(s) 227
StyI CCWWGG 1 cut(s) 69
TaaI ACNGT 2 cut(s) 241, 304
TasI AATT 2 cut(s) 29, 135
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TseI GCWGC 3 cut(s) 245, 326, 329
TspDTI ATGAA 1 cut(s) 184
VpaK11BI GGWCC 2 cut(s) 100, 223
XmnI GAANNNNTTC 1 cut(s) 48
XspI CTAG 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.