Prupe.7G261800_v2.0.a1

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0028402
Physical Location & Seq
Reverse (-)
21750145 .. 21752820
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G261800.1_v2.0.a1.CDS.6

Sequence Viewer

Length: 1500 bp
ATGCCATTCTCAAAGAATTCTCAGACTGAGTCAAAATTCCCTTATGAAGCCCAAAGCCAGTGCTTTGACCTAGCAGAAGGTTCTTTCACACCTTTAGTAATGCAGTCATGTTGCAGCTCTGCGCTTCAATCTCTATACCAAGCAATGACTATAAAAGCTAGTCAATCTAGATCCATATTCCTTGAGTTTGCTGAAGCTCAGAATTGCACCAACATATTCCAAAACCTTCACCACAGAACCAATATTAACAACTGTGATCTCCAAGATTTTATCTCTTCTTCAACACCAAACCTGTGCTCAAACAATGTTGATTCAGTCATTGGTCTTCTTGGGGTTGACATGTACAACGCTTTACGGTCCAATTGTAAAGGCTTATCCAGCAGTAATCATAGCGATGAAGCATGTTTCGATTGTGTTGTTTCTTATAAGCAATCATTGCAAGCTCTAAAAGAAAGAAATAGATCAGGTAACAGGTGCGCTGAAGCTCTACTTGTTAGTCTTGCTAGCTCAGATGCTCAATCCCCAAACTTGGTTCGCGGAACTTTTTCTTGTTTGTGGAATGAAATAACTCATATCCTGGGTTCCAAGAAGCTTCTTGCCATAGTAATCCTGGCGGCAGCACTGGTGATTATAACTCCAATTCTTTATAAGATAACCAGGAAGCAACTGCAATATGCAAGCAAAAAAGATATCGAAATCCTATCTGATGAAGTGTTGAAAGCTACCAACCATTTTGATGATTCAAACTTGATTGGAGAGGCAACACTTGGGAAATTCTATGTTGGGATAATGCCTAGTGGAATGCCAACAACAATTAAGAGACTTAATCAGGGGATCATTAAAGTTCAAAATTTCGGCGAAGAGGTAATAAGGAAAGCCAAGATAAGGCATCCTAATGTGGTGACCACTTTGGGATATTGTGATACAGGAGAGCACTGTCTTGTTTATGAGTATTGCGTAAATGGTAACCTAGCAGGCTGGCTTCTTGGTAAGTCACATTTTCTAGCAGGTAATGGGAAGACACTAATCTTGACATGGGAACATCGAATGCAGATATCGATTGGCATTGCTCGGGGTTTATGTTTTCTCCATGCCAATGCCTTGGCTAAAATGGTTCATGGAGATTTAAAGTTATCAAACATATTTCTGAATGAGAAACTTGAAGCCAAGATTTTAGACTCCAACTTCTCAAACTGCAAGCCTAATGAAACAAAAGGGCTACAAACCATAAAAAACGACGTCTTCGATTTCGGGGTTGTTCTGCTTCAAGTTTTGACAGGAAAGAAATCAAAATCTGTGGTTGAGGAGGCAAGGGAAGCAATACTAAAAGGAGCAAGTATAAGTGGCATGGCGGATCCACGTTTAAATGGGGCTTATGTTTCCTCTGAATTTCGAAATGTATTGTCCATAGCTGTTAGATGTACAGCTCCAAGTGAACGGGAAAGGCCATACATGGAAGAAATTGTACGAAAACTTGAAGAAACACAAAGTTTAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

500

Amino Acids

55.12

Weight (kDa)

8.22

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0028402)

Species Orthologous Gene IDs
malus_domestica MD15G1152800.v1.1
prunus_persica Prupe.7G261800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 426, 632, 648
AatII GACGTC 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 998
AccII CGCG 1 cut(s) 537
AciI CCGC 3 cut(s) 537, 614, 1352
AclWI GGATC 4 cut(s) 165, 842, 1349, 1362
AcsI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
AcuI CTGAAG 2 cut(s) 213, 501
AcyI GRCGYC 1 cut(s) 1239
AfaI GTAC 3 cut(s) 344, 1423, 1467
AfiI CCNNNNNNNGG 2 cut(s) 529, 885
AflIII ACRYGT 1 cut(s) 339
AgsI TTSAA 8 cut(s) 128, 282, 718, 744, 848, 1163, 1268, 1478
AjnI CCWGG 3 cut(s) 576, 609, 656
Alw21I GWGCWC 2 cut(s) 299, 936
Alw26I GTCTC 1 cut(s) 814
AlwI GGATC 4 cut(s) 165, 842, 1349, 1362
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 1 cut(s) 1445
ApeKI GCWGC 2 cut(s) 114, 617
ApoI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
Asp700I GAANNNNTTC 1 cut(s) 544
AspLEI GCGC 2 cut(s) 124, 479
AspS9I GGNCC 1 cut(s) 357
AsuHPI GGTGA 3 cut(s) 221, 637, 913
AsuII TTCGAA 1 cut(s) 1393
AsuNHI GCTAGC 1 cut(s) 503
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 1 cut(s) 357
BamHI GGATCC 1 cut(s) 1354
BarI GAAGNNNNNNTAC 2 cut(s) 1449, 1481
BbsI GAAGAC 3 cut(s) 317, 1025, 1234
Bbv12I GWGCWC 2 cut(s) 299, 936
BbvI GCAGC 2 cut(s) 126, 629
BciT130I CCWGG 3 cut(s) 578, 611, 658
BcoDI GTCTC 1 cut(s) 814
BfaI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
BfuAI ACCTGC 1 cut(s) 998
BisI GCNGC 3 cut(s) 115, 615, 618
BlsI GCNGC 3 cut(s) 116, 616, 619
Bme1390I CCNGG 3 cut(s) 578, 611, 658
Bme18I GGWCC 1 cut(s) 357
BmeT110I CYCGRG 1 cut(s) 1071
BmgT120I GGNCC 1 cut(s) 357
BmiI GGNNCC 2 cut(s) 583, 1356
BmrFI CCNGG 3 cut(s) 578, 611, 658
BmsI GCATC 2 cut(s) 502, 898
BmtI GCTAGC 1 cut(s) 507
BpiI GAAGAC 3 cut(s) 317, 1025, 1234
Bpu14I TTCGAA 1 cut(s) 1393
BpuEI CTTGAG 1 cut(s) 203
Bsa29I ATCGAT 1 cut(s) 1058
BsaHI GRCGYC 1 cut(s) 1239
BsaJI CCNNGG 2 cut(s) 577, 1101
Bsc4I CCNNNNNNNGG 2 cut(s) 529, 885
Bse1I ACTGG 2 cut(s) 58, 627
Bse3DI GCAATG 3 cut(s) 150, 434, 1065
BseBI CCWGG 3 cut(s) 578, 611, 658
BseCI ATCGAT 1 cut(s) 1058
BseDI CCNNGG 2 cut(s) 577, 1101
BseGI GGATG 1 cut(s) 889
BseLI CCNNNNNNNGG 2 cut(s) 529, 885
BseMI GCAATG 3 cut(s) 150, 434, 1065
BseMII CTCAG 4 cut(s) 18, 35, 212, 522
BseNI ACTGG 2 cut(s) 58, 627
BseRI GAGGAG 1 cut(s) 1319
BseXI GCAGC 2 cut(s) 126, 629
Bsh1236I CGCG 1 cut(s) 537
BshFI GGCC 1 cut(s) 1447
BshVI ATCGAT 1 cut(s) 1058
BsiHKAI GWGCWC 2 cut(s) 299, 936
BsiHKCI CYCGRG 1 cut(s) 1071
BslI CCNNNNNNNGG 2 cut(s) 529, 885
BsmAI GTCTC 1 cut(s) 814
BsmI GAATGC 2 cut(s) 807, 1053
BsnI GGCC 1 cut(s) 1447
BsoBI CYCGRG 1 cut(s) 1071
Bsp119I TTCGAA 1 cut(s) 1393
Bsp1286I GDGCHC 2 cut(s) 299, 936
Bsp1407I TGTACA 2 cut(s) 342, 1421
Bsp143I GATC 5 cut(s) 170, 256, 461, 834, 1354
BspACI CCGC 3 cut(s) 537, 614, 1352
BspANI GGCC 1 cut(s) 1447
BspCNI CTCAG 4 cut(s) 19, 34, 211, 521
BspDI ATCGAT 1 cut(s) 1058
BspFNI CGCG 1 cut(s) 537
BspLI GGNNCC 2 cut(s) 583, 1356
BspMI ACCTGC 1 cut(s) 998
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 4 cut(s) 165, 842, 1349, 1362
BspT104I TTCGAA 1 cut(s) 1393
BsrDI GCAATG 3 cut(s) 150, 434, 1065
BsrGI TGTACA 2 cut(s) 342, 1421
BsrI ACTGG 2 cut(s) 58, 627
BssECI CCNNGG 2 cut(s) 577, 1101
BssMI GATC 5 cut(s) 170, 256, 461, 834, 1354
BssNI GRCGYC 1 cut(s) 1239
BssT1I CCWWGG 1 cut(s) 1101
Bst2UI CCWGG 3 cut(s) 578, 611, 658
Bst4CI ACNGT 3 cut(s) 254, 357, 938
Bst6I CTCTTC 2 cut(s) 280, 855
BstACI GRCGYC 1 cut(s) 1239
BstAPI GCANNNNNTGC 1 cut(s) 436
BstAUI TGTACA 2 cut(s) 342, 1421
BstBI TTCGAA 1 cut(s) 1393
BstC8I GCNNGC 6 cut(s) 441, 505, 679, 976, 980, 1199
BstDEI CTNAG 4 cut(s) 21, 27, 198, 508
BstEII GGTNACC 2 cut(s) 901, 965
BstF5I GGATG 1 cut(s) 889
BstFNI CGCG 1 cut(s) 537
BstHHI GCGC 2 cut(s) 124, 479
BstKTI GATC 5 cut(s) 173, 259, 464, 837, 1357
BstMAI GTCTC 1 cut(s) 814
BstMBI GATC 5 cut(s) 170, 256, 461, 834, 1354
BstMWI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
BstNI CCWGG 3 cut(s) 578, 611, 658
BstNSI RCATGY 2 cut(s) 343, 405
BstPI GGTNACC 2 cut(s) 901, 965
BstSCI CCNGG 3 cut(s) 576, 609, 656
BstUI CGCG 1 cut(s) 537
BstV1I GCAGC 2 cut(s) 126, 629
BstV2I GAAGAC 3 cut(s) 317, 1025, 1234
BstX2I RGATCY 2 cut(s) 170, 1354
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstYI RGATCY 2 cut(s) 170, 1354
Bsu15I ATCGAT 1 cut(s) 1058
BsuRI GGCC 1 cut(s) 1447
BsuTUI ATCGAT 1 cut(s) 1058
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 1 cut(s) 889
BtsIMutI CAGTG 3 cut(s) 65, 620, 934
BveI ACCTGC 1 cut(s) 998
Cac8I GCNNGC 6 cut(s) 441, 505, 679, 976, 980, 1199
CfoI GCGC 2 cut(s) 124, 479
Cfr13I GGNCC 1 cut(s) 357
ClaI ATCGAT 1 cut(s) 1058
Csp6I GTAC 3 cut(s) 343, 1422, 1466
CspCI CAANNNNNGTGG 2 cut(s) 1278, 1313
CviAII CATG 8 cut(s) 108, 340, 402, 1035, 1091, 1118, 1348, 1453
CviQI GTAC 3 cut(s) 343, 1422, 1466
DdeI CTNAG 4 cut(s) 21, 27, 198, 508
DpnI GATC 5 cut(s) 172, 258, 463, 836, 1356
DpnII GATC 5 cut(s) 170, 256, 461, 834, 1354
DraI TTTAAA 2 cut(s) 1128, 1365
Eam1104I CTCTTC 2 cut(s) 280, 855
EarI CTCTTC 2 cut(s) 280, 855
EciI GGCGGA 1 cut(s) 1367
Eco130I CCWWGG 1 cut(s) 1101
Eco32I GATATC 2 cut(s) 691, 1056
Eco47I GGWCC 1 cut(s) 357
Eco57I CTGAAG 2 cut(s) 213, 501
Eco88I CYCGRG 1 cut(s) 1071
Eco91I GGTNACC 2 cut(s) 901, 965
EcoO65I GGTNACC 2 cut(s) 901, 965
EcoRI GAATTC 1 cut(s) 16
EcoRII CCWGG 3 cut(s) 576, 609, 656
EcoRV GATATC 2 cut(s) 691, 1056
EcoT14I CCWWGG 1 cut(s) 1101
ErhI CCWWGG 1 cut(s) 1101
FaeI CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FatI CATG 8 cut(s) 107, 339, 401, 1034, 1090, 1117, 1347, 1452
Fnu4HI GCNGC 3 cut(s) 115, 615, 618
FokI GGATG 1 cut(s) 876
Fsp4HI GCNGC 3 cut(s) 115, 615, 618
FspBI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
GlaI GCGC 2 cut(s) 123, 478
GluI GCNGC 3 cut(s) 115, 615, 618
HaeIII GGCC 1 cut(s) 1447
HhaI GCGC 2 cut(s) 124, 479
Hin1I GRCGYC 1 cut(s) 1239
Hin1II CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
Hin6I GCGC 2 cut(s) 122, 477
HinP1I GCGC 2 cut(s) 122, 477
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 1 cut(s) 590
HinfI GANTC 4 cut(s) 29, 311, 740, 1178
HphI GGTGA 3 cut(s) 221, 637, 913
Hpy166II GTNNAC 2 cut(s) 337, 1436
Hpy188I TCNGA 7 cut(s) 24, 201, 511, 706, 1149, 1387, 1499
Hpy188III TCNNGA 2 cut(s) 168, 1030
Hpy8I GTNNAC 2 cut(s) 337, 1436
Hpy99I CGWCG 1 cut(s) 1241
HpyAV CCTTC 2 cut(s) 71, 236
HpyCH4III ACNGT 3 cut(s) 254, 357, 938
HpyCH4IV ACGT 2 cut(s) 1239, 1360
HpyCH4V TGCA 8 cut(s) 103, 114, 207, 439, 670, 677, 1051, 1197
HpyF10VI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
HpyF3I CTNAG 4 cut(s) 21, 27, 198, 508
HpySE526I ACGT 2 cut(s) 1239, 1360
Hsp92I GRCGYC 1 cut(s) 1239
Hsp92II CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
HspAI GCGC 2 cut(s) 122, 477
Kzo9I GATC 5 cut(s) 170, 256, 461, 834, 1354
LmnI GCTCC 2 cut(s) 1331, 1432
Lsp1109I GCAGC 2 cut(s) 126, 629
LweI GCATC 2 cut(s) 502, 898
MaeI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
MaeII ACGT 2 cut(s) 1239, 1360
MaeIII GTNAC 4 cut(s) 467, 901, 965, 993
MalI GATC 5 cut(s) 172, 258, 463, 836, 1356
MboI GATC 5 cut(s) 170, 256, 461, 834, 1354
MboII GAAGA 8 cut(s) 267, 270, 317, 872, 1030, 1234, 1469, 1490
MfeI CAATTG 1 cut(s) 361
MflI RGATCY 2 cut(s) 170, 1354
MhlI GDGCHC 2 cut(s) 299, 936
MlyI GAGTC 2 cut(s) 38, 1172
MmeI TCCRAC 1 cut(s) 1206
MnlI CCTC 5 cut(s) 751, 856, 1297, 1300, 1393
MroXI GAANNNNTTC 1 cut(s) 544
MseI TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
MslI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
MspR9I CCNGG 3 cut(s) 578, 611, 658
MunI CAATTG 1 cut(s) 361
Mva1269I GAATGC 2 cut(s) 807, 1053
MvaI CCWGG 3 cut(s) 578, 611, 658
MvnI CGCG 1 cut(s) 537
MwoI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
NdeII GATC 5 cut(s) 170, 256, 461, 834, 1354
NheI GCTAGC 1 cut(s) 503
NlaIII CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
NlaIV GGNNCC 2 cut(s) 583, 1356
NmuCI GTSAC 2 cut(s) 901, 993
NspI RCATGY 2 cut(s) 343, 405
NspV TTCGAA 1 cut(s) 1393
PciI ACATGT 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 1242
PctI GAATGC 2 cut(s) 807, 1053
PdmI GAANNNNTTC 1 cut(s) 544
PfeI GAWTC 2 cut(s) 311, 740
PflFI GACNNNGTC 1 cut(s) 28
PkrI GCNGC 3 cut(s) 116, 616, 619
PleI GAGTC 2 cut(s) 37, 1172
PpsI GAGTC 2 cut(s) 37, 1172
PscI ACATGT 1 cut(s) 339
PsiI TTATAA 3 cut(s) 426, 632, 648
Psp6I CCWGG 3 cut(s) 576, 609, 656
PspEI GGTNACC 2 cut(s) 901, 965
PspGI CCWGG 3 cut(s) 576, 609, 656
PspN4I GGNNCC 2 cut(s) 583, 1356
PspPI GGNCC 1 cut(s) 357
PsuI RGATCY 2 cut(s) 170, 1354
PsyI GACNNNGTC 1 cut(s) 28
RsaI GTAC 3 cut(s) 344, 1423, 1467
RsaNI GTAC 3 cut(s) 343, 1422, 1466
RseI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
SaqAI TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
SatI GCNGC 3 cut(s) 115, 615, 618
Sau3AI GATC 5 cut(s) 170, 256, 461, 834, 1354
Sau96I GGNCC 1 cut(s) 357
SchI GAGTC 2 cut(s) 38, 1172
ScrFI CCNGG 3 cut(s) 578, 611, 658
SduI GDGCHC 2 cut(s) 299, 936
SfaNI GCATC 2 cut(s) 502, 898
SfuI TTCGAA 1 cut(s) 1393
SinI GGWCC 1 cut(s) 357
SmiMI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SsiI CCGC 3 cut(s) 537, 614, 1352
SspI AATATT 1 cut(s) 244
SspMI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
StyD4I CCNGG 3 cut(s) 576, 609, 656
StyI CCWWGG 1 cut(s) 1101
TaaI ACNGT 3 cut(s) 254, 357, 938
TaiI ACGT 2 cut(s) 1242, 1363
TaqI TCGA 6 cut(s) 408, 693, 1045, 1058, 1245, 1393
TatI WGTACW 2 cut(s) 342, 1421
TauI GCSGC 1 cut(s) 617
TfiI GAWTC 2 cut(s) 311, 740
Tru1I TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
Tru9I TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
TscAI CASTG 3 cut(s) 65, 627, 941
TseFI GTSAC 2 cut(s) 901, 993
TseI GCWGC 2 cut(s) 114, 617
Tsp45I GTSAC 2 cut(s) 901, 993
TspDTI ATGAA 6 cut(s) 60, 411, 576, 723, 1106, 1221
TspRI CASTG 3 cut(s) 65, 627, 941
Tth111I GACNNNGTC 1 cut(s) 28
VpaK11BI GGWCC 1 cut(s) 357
XapI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
XbaI TCTAGA 1 cut(s) 167
XceI RCATGY 2 cut(s) 343, 405
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XmnI GAANNNNTTC 1 cut(s) 544
XspI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
ZraI GACGTC 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.