Prupe.7G261800_v2.0.a1

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0028402
Physical Location & Seq
Reverse (-)
21750145 .. 21752820
2676 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G261800.1

Sequence Viewer

Length: 1500 bp
ATGCCATTCTCAAAGAATTCTCAGACTGAGTCAAAATTCCCTTATGAAGCCCAAAGCCAGTGCTTTGACCTAGCAGAAGGTTCTTTCACACCTTTAGTAATGCAGTCATGTTGCAGCTCTGCGCTTCAATCTCTATACCAAGCAATGACTATAAAAGCTAGTCAATCTAGATCCATATTCCTTGAGTTTGCTGAAGCTCAGAATTGCACCAACATATTCCAAAACCTTCACCACAGAACCAATATTAACAACTGTGATCTCCAAGATTTTATCTCTTCTTCAACACCAAACCTGTGCTCAAACAATGTTGATTCAGTCATTGGTCTTCTTGGGGTTGACATGTACAACGCTTTACGGTCCAATTGTAAAGGCTTATCCAGCAGTAATCATAGCGATGAAGCATGTTTCGATTGTGTTGTTTCTTATAAGCAATCATTGCAAGCTCTAAAAGAAAGAAATAGATCAGGTAACAGGTGCGCTGAAGCTCTACTTGTTAGTCTTGCTAGCTCAGATGCTCAATCCCCAAACTTGGTTCGCGGAACTTTTTCTTGTTTGTGGAATGAAATAACTCATATCCTGGGTTCCAAGAAGCTTCTTGCCATAGTAATCCTGGCGGCAGCACTGGTGATTATAACTCCAATTCTTTATAAGATAACCAGGAAGCAACTGCAATATGCAAGCAAAAAAGATATCGAAATCCTATCTGATGAAGTGTTGAAAGCTACCAACCATTTTGATGATTCAAACTTGATTGGAGAGGCAACACTTGGGAAATTCTATGTTGGGATAATGCCTAGTGGAATGCCAACAACAATTAAGAGACTTAATCAGGGGATCATTAAAGTTCAAAATTTCGGCGAAGAGGTAATAAGGAAAGCCAAGATAAGGCATCCTAATGTGGTGACCACTTTGGGATATTGTGATACAGGAGAGCACTGTCTTGTTTATGAGTATTGCGTAAATGGTAACCTAGCAGGCTGGCTTCTTGGTAAGTCACATTTTCTAGCAGGTAATGGGAAGACACTAATCTTGACATGGGAACATCGAATGCAGATATCGATTGGCATTGCTCGGGGTTTATGTTTTCTCCATGCCAATGCCTTGGCTAAAATGGTTCATGGAGATTTAAAGTTATCAAACATATTTCTGAATGAGAAACTTGAAGCCAAGATTTTAGACTCCAACTTCTCAAACTGCAAGCCTAATGAAACAAAAGGGCTACAAACCATAAAAAACGACGTCTTCGATTTCGGGGTTGTTCTGCTTCAAGTTTTGACAGGAAAGAAATCAAAATCTGTGGTTGAGGAGGCAAGGGAAGCAATACTAAAAGGAGCAAGTATAAGTGGCATGGCGGATCCACGTTTAAATGGGGCTTATGTTTCCTCTGAATTTCGAAATGTATTGTCCATAGCTGTTAGATGTACAGCTCCAAGTGAACGGGAAAGGCCATACATGGAAGAAATTGTACGAAAACTTGAAGAAACACAAAGTTTAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

500

Amino Acids

55.12

Weight (kDa)

8.22

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0028402)

Species Orthologous Gene IDs
malus_domestica MD15G1152800.v1.1
prunus_persica Prupe.7G261800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 426, 632, 648
AatII GACGTC 1 cut(s) 1242
Acc36I ACCTGC 1 cut(s) 998
AccII CGCG 1 cut(s) 537
AciI CCGC 3 cut(s) 537, 614, 1352
AclWI GGATC 4 cut(s) 165, 842, 1349, 1362
AcsI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
AcuI CTGAAG 2 cut(s) 213, 501
AcyI GRCGYC 1 cut(s) 1239
AfaI GTAC 3 cut(s) 344, 1423, 1467
AfiI CCNNNNNNNGG 2 cut(s) 529, 885
AflIII ACRYGT 1 cut(s) 339
AgsI TTSAA 8 cut(s) 128, 282, 718, 744, 848, 1163, 1268, 1478
AjnI CCWGG 3 cut(s) 576, 609, 656
Alw21I GWGCWC 2 cut(s) 299, 936
Alw26I GTCTC 1 cut(s) 814
AlwI GGATC 4 cut(s) 165, 842, 1349, 1362
Ama87I CYCGRG 1 cut(s) 1071
AoxI GGCC 1 cut(s) 1445
ApeKI GCWGC 2 cut(s) 114, 617
ApoI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
Asp700I GAANNNNTTC 1 cut(s) 544
AspLEI GCGC 2 cut(s) 124, 479
AspS9I GGNCC 1 cut(s) 357
AsuHPI GGTGA 3 cut(s) 221, 637, 913
AsuII TTCGAA 1 cut(s) 1393
AsuNHI GCTAGC 1 cut(s) 503
AvaI CYCGRG 1 cut(s) 1071
AvaII GGWCC 1 cut(s) 357
BamHI GGATCC 1 cut(s) 1354
BarI GAAGNNNNNNTAC 2 cut(s) 1449, 1481
BbsI GAAGAC 3 cut(s) 317, 1025, 1234
Bbv12I GWGCWC 2 cut(s) 299, 936
BbvI GCAGC 2 cut(s) 126, 629
BciT130I CCWGG 3 cut(s) 578, 611, 658
BcoDI GTCTC 1 cut(s) 814
BfaI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
BfuAI ACCTGC 1 cut(s) 998
BisI GCNGC 3 cut(s) 115, 615, 618
BlsI GCNGC 3 cut(s) 116, 616, 619
Bme1390I CCNGG 3 cut(s) 578, 611, 658
Bme18I GGWCC 1 cut(s) 357
BmeT110I CYCGRG 1 cut(s) 1071
BmgT120I GGNCC 1 cut(s) 357
BmiI GGNNCC 2 cut(s) 583, 1356
BmrFI CCNGG 3 cut(s) 578, 611, 658
BmsI GCATC 2 cut(s) 502, 898
BmtI GCTAGC 1 cut(s) 507
BpiI GAAGAC 3 cut(s) 317, 1025, 1234
Bpu14I TTCGAA 1 cut(s) 1393
BpuEI CTTGAG 1 cut(s) 203
Bsa29I ATCGAT 1 cut(s) 1058
BsaHI GRCGYC 1 cut(s) 1239
BsaJI CCNNGG 2 cut(s) 577, 1101
Bsc4I CCNNNNNNNGG 2 cut(s) 529, 885
Bse1I ACTGG 2 cut(s) 58, 627
Bse3DI GCAATG 3 cut(s) 150, 434, 1065
BseBI CCWGG 3 cut(s) 578, 611, 658
BseCI ATCGAT 1 cut(s) 1058
BseDI CCNNGG 2 cut(s) 577, 1101
BseGI GGATG 1 cut(s) 889
BseLI CCNNNNNNNGG 2 cut(s) 529, 885
BseMI GCAATG 3 cut(s) 150, 434, 1065
BseMII CTCAG 4 cut(s) 18, 35, 212, 522
BseNI ACTGG 2 cut(s) 58, 627
BseRI GAGGAG 1 cut(s) 1319
BseXI GCAGC 2 cut(s) 126, 629
Bsh1236I CGCG 1 cut(s) 537
BshFI GGCC 1 cut(s) 1447
BshVI ATCGAT 1 cut(s) 1058
BsiHKAI GWGCWC 2 cut(s) 299, 936
BsiHKCI CYCGRG 1 cut(s) 1071
BslI CCNNNNNNNGG 2 cut(s) 529, 885
BsmAI GTCTC 1 cut(s) 814
BsmI GAATGC 2 cut(s) 807, 1053
BsnI GGCC 1 cut(s) 1447
BsoBI CYCGRG 1 cut(s) 1071
Bsp119I TTCGAA 1 cut(s) 1393
Bsp1286I GDGCHC 2 cut(s) 299, 936
Bsp1407I TGTACA 2 cut(s) 342, 1421
Bsp143I GATC 5 cut(s) 170, 256, 461, 834, 1354
BspACI CCGC 3 cut(s) 537, 614, 1352
BspANI GGCC 1 cut(s) 1447
BspCNI CTCAG 4 cut(s) 19, 34, 211, 521
BspDI ATCGAT 1 cut(s) 1058
BspFNI CGCG 1 cut(s) 537
BspLI GGNNCC 2 cut(s) 583, 1356
BspMI ACCTGC 1 cut(s) 998
BspOI GCTAGC 1 cut(s) 507
BspPI GGATC 4 cut(s) 165, 842, 1349, 1362
BspT104I TTCGAA 1 cut(s) 1393
BsrDI GCAATG 3 cut(s) 150, 434, 1065
BsrGI TGTACA 2 cut(s) 342, 1421
BsrI ACTGG 2 cut(s) 58, 627
BssECI CCNNGG 2 cut(s) 577, 1101
BssMI GATC 5 cut(s) 170, 256, 461, 834, 1354
BssNI GRCGYC 1 cut(s) 1239
BssT1I CCWWGG 1 cut(s) 1101
Bst2UI CCWGG 3 cut(s) 578, 611, 658
Bst4CI ACNGT 3 cut(s) 254, 357, 938
Bst6I CTCTTC 2 cut(s) 280, 855
BstACI GRCGYC 1 cut(s) 1239
BstAPI GCANNNNNTGC 1 cut(s) 436
BstAUI TGTACA 2 cut(s) 342, 1421
BstBI TTCGAA 1 cut(s) 1393
BstC8I GCNNGC 6 cut(s) 441, 505, 679, 976, 980, 1199
BstDEI CTNAG 4 cut(s) 21, 27, 198, 508
BstEII GGTNACC 2 cut(s) 901, 965
BstF5I GGATG 1 cut(s) 889
BstFNI CGCG 1 cut(s) 537
BstHHI GCGC 2 cut(s) 124, 479
BstKTI GATC 5 cut(s) 173, 259, 464, 837, 1357
BstMAI GTCTC 1 cut(s) 814
BstMBI GATC 5 cut(s) 170, 256, 461, 834, 1354
BstMWI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
BstNI CCWGG 3 cut(s) 578, 611, 658
BstNSI RCATGY 2 cut(s) 343, 405
BstPI GGTNACC 2 cut(s) 901, 965
BstSCI CCNGG 3 cut(s) 576, 609, 656
BstUI CGCG 1 cut(s) 537
BstV1I GCAGC 2 cut(s) 126, 629
BstV2I GAAGAC 3 cut(s) 317, 1025, 1234
BstX2I RGATCY 2 cut(s) 170, 1354
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstYI RGATCY 2 cut(s) 170, 1354
Bsu15I ATCGAT 1 cut(s) 1058
BsuRI GGCC 1 cut(s) 1447
BsuTUI ATCGAT 1 cut(s) 1058
BtgZI GCGATG 1 cut(s) 408
BtsCI GGATG 1 cut(s) 889
BtsIMutI CAGTG 3 cut(s) 65, 620, 934
BveI ACCTGC 1 cut(s) 998
Cac8I GCNNGC 6 cut(s) 441, 505, 679, 976, 980, 1199
CfoI GCGC 2 cut(s) 124, 479
Cfr13I GGNCC 1 cut(s) 357
ClaI ATCGAT 1 cut(s) 1058
Csp6I GTAC 3 cut(s) 343, 1422, 1466
CspCI CAANNNNNGTGG 2 cut(s) 1278, 1313
CviAII CATG 8 cut(s) 108, 340, 402, 1035, 1091, 1118, 1348, 1453
CviQI GTAC 3 cut(s) 343, 1422, 1466
DdeI CTNAG 4 cut(s) 21, 27, 198, 508
DpnI GATC 5 cut(s) 172, 258, 463, 836, 1356
DpnII GATC 5 cut(s) 170, 256, 461, 834, 1354
DraI TTTAAA 2 cut(s) 1128, 1365
Eam1104I CTCTTC 2 cut(s) 280, 855
EarI CTCTTC 2 cut(s) 280, 855
EciI GGCGGA 1 cut(s) 1367
Eco130I CCWWGG 1 cut(s) 1101
Eco32I GATATC 2 cut(s) 691, 1056
Eco47I GGWCC 1 cut(s) 357
Eco57I CTGAAG 2 cut(s) 213, 501
Eco88I CYCGRG 1 cut(s) 1071
Eco91I GGTNACC 2 cut(s) 901, 965
EcoO65I GGTNACC 2 cut(s) 901, 965
EcoRI GAATTC 1 cut(s) 16
EcoRII CCWGG 3 cut(s) 576, 609, 656
EcoRV GATATC 2 cut(s) 691, 1056
EcoT14I CCWWGG 1 cut(s) 1101
ErhI CCWWGG 1 cut(s) 1101
FaeI CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
FalI AAGNNNNNCTT 2 cut(s) 474, 506
FatI CATG 8 cut(s) 107, 339, 401, 1034, 1090, 1117, 1347, 1452
Fnu4HI GCNGC 3 cut(s) 115, 615, 618
FokI GGATG 1 cut(s) 876
Fsp4HI GCNGC 3 cut(s) 115, 615, 618
FspBI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
GlaI GCGC 2 cut(s) 123, 478
GluI GCNGC 3 cut(s) 115, 615, 618
HaeIII GGCC 1 cut(s) 1447
HhaI GCGC 2 cut(s) 124, 479
Hin1I GRCGYC 1 cut(s) 1239
Hin1II CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
Hin6I GCGC 2 cut(s) 122, 477
HinP1I GCGC 2 cut(s) 122, 477
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 1 cut(s) 590
HinfI GANTC 4 cut(s) 29, 311, 740, 1178
HphI GGTGA 3 cut(s) 221, 637, 913
Hpy166II GTNNAC 2 cut(s) 337, 1436
Hpy188I TCNGA 7 cut(s) 24, 201, 511, 706, 1149, 1387, 1499
Hpy188III TCNNGA 2 cut(s) 168, 1030
Hpy8I GTNNAC 2 cut(s) 337, 1436
Hpy99I CGWCG 1 cut(s) 1241
HpyAV CCTTC 2 cut(s) 71, 236
HpyCH4III ACNGT 3 cut(s) 254, 357, 938
HpyCH4IV ACGT 2 cut(s) 1239, 1360
HpyCH4V TGCA 8 cut(s) 103, 114, 207, 439, 670, 677, 1051, 1197
HpyF10VI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
HpyF3I CTNAG 4 cut(s) 21, 27, 198, 508
HpySE526I ACGT 2 cut(s) 1239, 1360
Hsp92I GRCGYC 1 cut(s) 1239
Hsp92II CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
HspAI GCGC 2 cut(s) 122, 477
Kzo9I GATC 5 cut(s) 170, 256, 461, 834, 1354
LmnI GCTCC 2 cut(s) 1331, 1432
Lsp1109I GCAGC 2 cut(s) 126, 629
LweI GCATC 2 cut(s) 502, 898
MaeI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
MaeII ACGT 2 cut(s) 1239, 1360
MaeIII GTNAC 4 cut(s) 467, 901, 965, 993
MalI GATC 5 cut(s) 172, 258, 463, 836, 1356
MboI GATC 5 cut(s) 170, 256, 461, 834, 1354
MboII GAAGA 8 cut(s) 267, 270, 317, 872, 1030, 1234, 1469, 1490
MfeI CAATTG 1 cut(s) 361
MflI RGATCY 2 cut(s) 170, 1354
MhlI GDGCHC 2 cut(s) 299, 936
MlyI GAGTC 2 cut(s) 38, 1172
MmeI TCCRAC 1 cut(s) 1206
MnlI CCTC 5 cut(s) 751, 856, 1297, 1300, 1393
MroXI GAANNNNTTC 1 cut(s) 544
MseI TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
MslI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
MspR9I CCNGG 3 cut(s) 578, 611, 658
MunI CAATTG 1 cut(s) 361
Mva1269I GAATGC 2 cut(s) 807, 1053
MvaI CCWGG 3 cut(s) 578, 611, 658
MvnI CGCG 1 cut(s) 537
MwoI GCNNNNNNNGC 3 cut(s) 378, 436, 1316
NdeII GATC 5 cut(s) 170, 256, 461, 834, 1354
NheI GCTAGC 1 cut(s) 503
NlaIII CATG 8 cut(s) 111, 343, 405, 1038, 1094, 1121, 1351, 1456
NlaIV GGNNCC 2 cut(s) 583, 1356
NmuCI GTSAC 2 cut(s) 901, 993
NspI RCATGY 2 cut(s) 343, 405
NspV TTCGAA 1 cut(s) 1393
PciI ACATGT 1 cut(s) 339
PcsI WCGNNNNNNNCGW 1 cut(s) 1242
PctI GAATGC 2 cut(s) 807, 1053
PdmI GAANNNNTTC 1 cut(s) 544
PfeI GAWTC 2 cut(s) 311, 740
PflFI GACNNNGTC 1 cut(s) 28
PkrI GCNGC 3 cut(s) 116, 616, 619
PleI GAGTC 2 cut(s) 37, 1172
PpsI GAGTC 2 cut(s) 37, 1172
PscI ACATGT 1 cut(s) 339
PsiI TTATAA 3 cut(s) 426, 632, 648
Psp6I CCWGG 3 cut(s) 576, 609, 656
PspEI GGTNACC 2 cut(s) 901, 965
PspGI CCWGG 3 cut(s) 576, 609, 656
PspN4I GGNNCC 2 cut(s) 583, 1356
PspPI GGNCC 1 cut(s) 357
PsuI RGATCY 2 cut(s) 170, 1354
PsyI GACNNNGTC 1 cut(s) 28
RsaI GTAC 3 cut(s) 344, 1423, 1467
RsaNI GTAC 3 cut(s) 343, 1422, 1466
RseI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
SaqAI TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
SatI GCNGC 3 cut(s) 115, 615, 618
Sau3AI GATC 5 cut(s) 170, 256, 461, 834, 1354
Sau96I GGNCC 1 cut(s) 357
SchI GAGTC 2 cut(s) 38, 1172
ScrFI CCNGG 3 cut(s) 578, 611, 658
SduI GDGCHC 2 cut(s) 299, 936
SfaNI GCATC 2 cut(s) 502, 898
SfuI TTCGAA 1 cut(s) 1393
SinI GGWCC 1 cut(s) 357
SmiMI CAYNNNNRTG 4 cut(s) 393, 735, 894, 1095
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SsiI CCGC 3 cut(s) 537, 614, 1352
SspI AATATT 1 cut(s) 244
SspMI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
StyD4I CCNGG 3 cut(s) 576, 609, 656
StyI CCWWGG 1 cut(s) 1101
TaaI ACNGT 3 cut(s) 254, 357, 938
TaiI ACGT 2 cut(s) 1242, 1363
TaqI TCGA 6 cut(s) 408, 693, 1045, 1058, 1245, 1393
TatI WGTACW 2 cut(s) 342, 1421
TauI GCSGC 1 cut(s) 617
TfiI GAWTC 2 cut(s) 311, 740
Tru1I TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
Tru9I TTAA 6 cut(s) 246, 816, 825, 840, 1127, 1364
TscAI CASTG 3 cut(s) 65, 627, 941
TseFI GTSAC 2 cut(s) 901, 993
TseI GCWGC 2 cut(s) 114, 617
Tsp45I GTSAC 2 cut(s) 901, 993
TspDTI ATGAA 6 cut(s) 60, 411, 576, 723, 1106, 1221
TspRI CASTG 3 cut(s) 65, 627, 941
Tth111I GACNNNGTC 1 cut(s) 28
VpaK11BI GGWCC 1 cut(s) 357
XapI RAATTY 5 cut(s) 16, 35, 773, 850, 1388
XbaI TCTAGA 1 cut(s) 167
XceI RCATGY 2 cut(s) 343, 405
XcmI CCANNNNNNNNNTGG 1 cut(s) 607
XmnI GAANNNNTTC 1 cut(s) 544
XspI CTAG 7 cut(s) 71, 159, 168, 504, 795, 971, 1004
ZraI GACGTC 1 cut(s) 1240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.