Prupe.8G082500_v2.0.a1
MYB Family

radialis-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
11545088 .. 11547488
2401 bp
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UTR
Exon/CDS
Intron
Prupe.8G082500.1

Sequence Viewer

Length: 264 bp
ATGGCATCAAGCGGAATCCCCTCAACTGGCTCAGGCTCAGGCTCCTTTTGGACTGCCAAGCAAAACAAAGATTTTGGAAACGCTCTGGCTGTGTTTGATAAGGACACTGCCAACCGCTGGGATAATGTTGCCAAGGATATTGGTGAAAAAACCCAGAGGAAGTCAAGAAAGGAAGTCAAGAAGCATTATGAGATTCTTGTTGAAGATATCATGCTTATTGAGCCTAGACAAGTGCCCATGCCGAATTTCAGAAAAAATAAATAA

Protein Analysis

88

Amino Acids

9.84

Weight (kDa)

9.7

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028983)

Species Orthologous Gene IDs
prunus_persica Prupe.8G082500_v2.0.a1 Prupe.8G082600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 117
AciI CCGC 2 cut(s) 12, 115
AcsI RAATTY 1 cut(s) 244
AfiI CCNNNNNNNGG 2 cut(s) 26, 117
AgsI TTSAA 1 cut(s) 203
ApoI RAATTY 1 cut(s) 244
AsuHPI GGTGA 1 cut(s) 155
BaeGI GKGCMC 1 cut(s) 237
BfaI CTAG 1 cut(s) 225
BmiI GGNNCC 1 cut(s) 43
BmsI GCATC 1 cut(s) 14
Bpu10I CCTNAGC 2 cut(s) 31, 37
BsaJI CCNNGG 1 cut(s) 132
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 117
Bse1I ACTGG 1 cut(s) 31
BseDI CCNNGG 1 cut(s) 132
BseLI CCNNNNNNNGG 2 cut(s) 26, 117
BseMII CTCAG 2 cut(s) 45, 51
BseNI ACTGG 1 cut(s) 31
BseSI GKGCMC 1 cut(s) 237
BseYI CCCAGC 1 cut(s) 117
BslI CCNNNNNNNGG 2 cut(s) 26, 117
Bsp1286I GDGCHC 1 cut(s) 237
BspACI CCGC 2 cut(s) 12, 115
BspCNI CTCAG 2 cut(s) 44, 50
BspLI GGNNCC 1 cut(s) 43
BsrI ACTGG 1 cut(s) 31
BssECI CCNNGG 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 132
BstDEI CTNAG 2 cut(s) 31, 37
BstMWI GCNNNNNNNGC 1 cut(s) 220
BstSLI GKGCMC 1 cut(s) 237
BtsI GCAGTG 1 cut(s) 105
BtsIMutI CAGTG 1 cut(s) 105
CviAII CATG 2 cut(s) 211, 238
CviJI RGCY 5 cut(s) 30, 36, 42, 89, 223
CviKI_1 RGCY 5 cut(s) 30, 36, 42, 89, 223
DdeI CTNAG 2 cut(s) 31, 37
Eco130I CCWWGG 1 cut(s) 132
Eco32I GATATC 1 cut(s) 208
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 132
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 2 cut(s) 214, 241
FaiI YATR 3 cut(s) 189, 212, 239
FatI CATG 2 cut(s) 210, 237
FspBI CTAG 1 cut(s) 225
GsaI CCCAGC 1 cut(s) 121
Hin1II CATG 2 cut(s) 214, 241
HinfI GANTC 2 cut(s) 15, 193
HphI GGTGA 1 cut(s) 155
Hpy188I TCNGA 1 cut(s) 251
Hpy188III TCNNGA 2 cut(s) 165, 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 220
HpyF3I CTNAG 2 cut(s) 31, 37
Hsp92II CATG 2 cut(s) 214, 241
LmnI GCTCC 1 cut(s) 47
LpnPI CCDG 6 cut(s) 12, 18, 24, 71, 103, 167
LweI GCATC 1 cut(s) 14
MaeI CTAG 1 cut(s) 225
MboII GAAGA 1 cut(s) 215
MhlI GDGCHC 1 cut(s) 237
MluCI AATT 1 cut(s) 244
MnlI CCTC 2 cut(s) 31, 150
MspA1I CMGCKG 1 cut(s) 117
MwoI GCNNNNNNNGC 1 cut(s) 220
NlaIII CATG 2 cut(s) 214, 241
NlaIV GGNNCC 1 cut(s) 43
PfeI GAWTC 2 cut(s) 15, 193
PflMI CCANNNNNTGG 1 cut(s) 117
PspFI CCCAGC 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 43
SduI GDGCHC 1 cut(s) 237
SfaNI GCATC 1 cut(s) 14
Sse9I AATT 1 cut(s) 244
SsiI CCGC 2 cut(s) 12, 115
SspMI CTAG 1 cut(s) 225
StyI CCWWGG 1 cut(s) 132
TasI AATT 1 cut(s) 244
TfiI GAWTC 2 cut(s) 15, 193
TscAI CASTG 1 cut(s) 112
TspRI CASTG 1 cut(s) 112
Van91I CCANNNNNTGG 1 cut(s) 117
XapI RAATTY 1 cut(s) 244
XspI CTAG 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.