Prupe.8G082600_v2.0.a1
MYB Family

radialis-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
11549339 .. 11549566
228 bp
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UTR
Exon/CDS
Intron
Prupe.8G082600.1

Sequence Viewer

Length: 228 bp
ATGTCCTCAACTGGATCTAGCTCCTTTTGGACTGCCAAGCAAAACAAAGATTTTGAAAACGCTTTGGCTGTGTTTGACAAGGACACTGCCAACCGCTGGAATAATGTTGCCAAGGCAGTTGGCGAAGAAACTGAGAGGAAGTCCAGAAGCATTATGAGCTTCTTGTTGAAGATATCATGCTTATTGAGCCTGGACAAGTGCCCACCCCAAATTATAGAAAGAAATTAA

Protein Analysis

76

Amino Acids

8.46

Weight (kDa)

8.71

Isoelectric Point (pI)

71.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0028983)

Species Orthologous Gene IDs
prunus_persica Prupe.8G082500_v2.0.a1 Prupe.8G082600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 96
AciI CCGC 1 cut(s) 94
AclWI GGATC 1 cut(s) 22
AfiI CCNNNNNNNGG 1 cut(s) 96
AgsI TTSAA 2 cut(s) 56, 169
AjnI CCWGG 1 cut(s) 189
AluBI AGCT 2 cut(s) 21, 159
AluI AGCT 2 cut(s) 21, 159
AlwI GGATC 1 cut(s) 22
BaeGI GKGCMC 1 cut(s) 203
BciT130I CCWGG 1 cut(s) 191
BfaI CTAG 1 cut(s) 18
Bme1390I CCNGG 1 cut(s) 191
BmrFI CCNGG 1 cut(s) 191
BsaJI CCNNGG 1 cut(s) 111
Bsc4I CCNNNNNNNGG 1 cut(s) 96
Bse1I ACTGG 1 cut(s) 16
BseBI CCWGG 1 cut(s) 191
BseDI CCNNGG 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 96
BseMII CTCAG 1 cut(s) 123
BseNI ACTGG 1 cut(s) 16
BseSI GKGCMC 1 cut(s) 203
BslI CCNNNNNNNGG 1 cut(s) 96
Bsp1286I GDGCHC 1 cut(s) 203
Bsp143I GATC 1 cut(s) 14
BspACI CCGC 1 cut(s) 94
BspCNI CTCAG 1 cut(s) 124
BspPI GGATC 1 cut(s) 22
BsrI ACTGG 1 cut(s) 16
BssECI CCNNGG 1 cut(s) 111
BssMI GATC 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 111
Bst2UI CCWGG 1 cut(s) 191
BstDEI CTNAG 1 cut(s) 132
BstKTI GATC 1 cut(s) 17
BstMBI GATC 1 cut(s) 14
BstMWI GCNNNNNNNGC 2 cut(s) 156, 186
BstNI CCWGG 1 cut(s) 191
BstSCI CCNGG 1 cut(s) 189
BstSLI GKGCMC 1 cut(s) 203
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BtsI GCAGTG 1 cut(s) 84
BtsIMutI CAGTG 1 cut(s) 84
CviAII CATG 1 cut(s) 177
CviJI RGCY 4 cut(s) 21, 68, 159, 189
CviKI_1 RGCY 4 cut(s) 21, 68, 159, 189
DdeI CTNAG 1 cut(s) 132
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
Eco130I CCWWGG 1 cut(s) 111
Eco32I GATATC 1 cut(s) 174
EcoRII CCWGG 1 cut(s) 189
EcoRV GATATC 1 cut(s) 174
EcoT14I CCWWGG 1 cut(s) 111
ErhI CCWWGG 1 cut(s) 111
FaeI CATG 1 cut(s) 180
FaiI YATR 3 cut(s) 155, 178, 215
FatI CATG 1 cut(s) 176
FspBI CTAG 1 cut(s) 18
Hin1II CATG 1 cut(s) 180
Hpy188III TCNNGA 1 cut(s) 144
HpyF10VI GCNNNNNNNGC 2 cut(s) 156, 186
HpyF3I CTNAG 1 cut(s) 132
Hsp92II CATG 1 cut(s) 180
Kzo9I GATC 1 cut(s) 14
LmnI GCTCC 1 cut(s) 26
LpnPI CCDG 4 cut(s) 82, 157, 176, 203
MaeI CTAG 1 cut(s) 18
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 2 cut(s) 137, 181
MflI RGATCY 1 cut(s) 14
MhlI GDGCHC 1 cut(s) 203
MluCI AATT 2 cut(s) 210, 223
MnlI CCTC 2 cut(s) 16, 129
MseI TTAA 1 cut(s) 226
MspA1I CMGCKG 1 cut(s) 96
MspR9I CCNGG 1 cut(s) 191
MvaI CCWGG 1 cut(s) 191
MwoI GCNNNNNNNGC 2 cut(s) 156, 186
NdeII GATC 1 cut(s) 14
NlaIII CATG 1 cut(s) 180
PflMI CCANNNNNTGG 1 cut(s) 96
Psp6I CCWGG 1 cut(s) 189
PspGI CCWGG 1 cut(s) 189
PsuI RGATCY 1 cut(s) 14
SaqAI TTAA 1 cut(s) 226
Sau3AI GATC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 191
SduI GDGCHC 1 cut(s) 203
SetI ASST 2 cut(s) 23, 161
Sse9I AATT 2 cut(s) 210, 223
SsiI CCGC 1 cut(s) 94
SspMI CTAG 1 cut(s) 18
StyD4I CCNGG 1 cut(s) 189
StyI CCWWGG 1 cut(s) 111
TasI AATT 2 cut(s) 210, 223
Tru1I TTAA 1 cut(s) 226
Tru9I TTAA 1 cut(s) 226
TscAI CASTG 1 cut(s) 91
TspRI CASTG 1 cut(s) 91
Van91I CCANNNNNTGG 1 cut(s) 96
XspI CTAG 1 cut(s) 18
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.