Belongs to the adaptor complexes large subunit family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD15G1300100.v1.1 |
| pyrus_communis | pycom01g00200 pycom02g18920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 638 |
| AccI | GTMKAC | 1 cut(s) | 64 |
| AciI | CCGC | 2 cut(s) | 276, 512 |
| AclWI | GGATC | 2 cut(s) | 486, 499 |
| AcuI | CTGAAG | 2 cut(s) | 2181, 2660 |
| AcvI | CACGTG | 1 cut(s) | 452 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 32, 511, 512, 1484 |
| AflIII | ACRYGT | 4 cut(s) | 401, 613, 1936, 2723 |
| AjiI | CACGTC | 2 cut(s) | 402, 785 |
| AjnI | CCWGG | 4 cut(s) | 118, 506, 1041, 2498 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 720, 752 |
| AleI | CACNNNNGTG | 3 cut(s) | 437, 529, 1448 |
| AluBI | AGCT | 6 cut(s) | 476, 1932, 2037, 2074, 2290, 2680 |
| AluI | AGCT | 6 cut(s) | 476, 1932, 2037, 2074, 2290, 2680 |
| Alw21I | GWGCWC | 1 cut(s) | 520 |
| Alw26I | GTCTC | 3 cut(s) | 1060, 2250, 2572 |
| AlwI | GGATC | 2 cut(s) | 486, 499 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2499 |
| AoxI | GGCC | 2 cut(s) | 730, 1011 |
| ApeKI | GCWGC | 1 cut(s) | 2626 |
| AseI | ATTAAT | 3 cut(s) | 953, 1097, 1886 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 973 |
| AspLEI | GCGC | 2 cut(s) | 1778, 2020 |
| AspS9I | GGNCC | 2 cut(s) | 347, 1012 |
| AsuNHI | GCTAGC | 1 cut(s) | 370 |
| AvaII | GGWCC | 1 cut(s) | 347 |
| AxyI | CCTNAGG | 1 cut(s) | 1071 |
| BamHI | GGATCC | 1 cut(s) | 491 |
| BanII | GRGCYC | 1 cut(s) | 996 |
| BauI | CACGAG | 2 cut(s) | 377, 2169 |
| BbrPI | CACGTG | 1 cut(s) | 452 |
| BbsI | GAAGAC | 2 cut(s) | 1397, 1838 |
| Bbv12I | GWGCWC | 1 cut(s) | 520 |
| BbvI | GCAGC | 1 cut(s) | 2638 |
| BccI | CCATC | 4 cut(s) | 47, 56, 2191, 2466 |
| BceAI | ACGGC | 2 cut(s) | 135, 2115 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 870, 904 |
| BciT130I | CCWGG | 4 cut(s) | 120, 508, 1043, 2500 |
| BclI | TGATCA | 1 cut(s) | 2433 |
| BcoDI | GTCTC | 3 cut(s) | 1060, 2250, 2572 |
| BfaI | CTAG | 4 cut(s) | 113, 305, 371, 437 |
| BfmI | CTRYAG | 1 cut(s) | 1557 |
| BfoI | RGCGCY | 1 cut(s) | 2021 |
| BfuAI | ACCTGC | 1 cut(s) | 638 |
| BisI | GCNGC | 1 cut(s) | 2627 |
| BlsI | GCNGC | 1 cut(s) | 2628 |
| Bme1390I | CCNGG | 4 cut(s) | 120, 508, 1043, 2500 |
| Bme18I | GGWCC | 1 cut(s) | 347 |
| BmgBI | CACGTC | 2 cut(s) | 402, 785 |
| BmgT120I | GGNCC | 2 cut(s) | 347, 1012 |
| BmiI | GGNNCC | 2 cut(s) | 142, 493 |
| BmrFI | CCNGG | 4 cut(s) | 120, 508, 1043, 2500 |
| BmrI | ACTGGG | 1 cut(s) | 1627 |
| BmsI | GCATC | 6 cut(s) | 571, 787, 1520, 1925, 2219, 2462 |
| BmtI | GCTAGC | 1 cut(s) | 374 |
| BmuI | ACTGGG | 1 cut(s) | 1627 |
| BpiI | GAAGAC | 2 cut(s) | 1397, 1838 |
| BpmI | CTGGAG | 2 cut(s) | 141, 858 |
| Bpu10I | CCTNAGC | 1 cut(s) | 990 |
| BpuEI | CTTGAG | 1 cut(s) | 1001 |
| Bsa29I | ATCGAT | 1 cut(s) | 51 |
| BsaAI | YACGTR | 3 cut(s) | 191, 248, 452 |
| BsaBI | GATNNNNATC | 2 cut(s) | 57, 1172 |
| BsaI | GGTCTC | 1 cut(s) | 2572 |
| BsaJI | CCNNGG | 7 cut(s) | 495, 506, 507, 527, 656, 1041, 1042 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 32, 511, 512, 1484 |
| Bse1I | ACTGG | 7 cut(s) | 313, 349, 733, 820, 1622, 1762, 2346 |
| Bse21I | CCTNAGG | 1 cut(s) | 1071 |
| Bse3DI | GCAATG | 1 cut(s) | 1035 |
| Bse8I | GATNNNNATC | 2 cut(s) | 57, 1172 |
| BseBI | CCWGG | 4 cut(s) | 120, 508, 1043, 2500 |
| BseCI | ATCGAT | 1 cut(s) | 51 |
| BseDI | CCNNGG | 7 cut(s) | 495, 506, 507, 527, 656, 1041, 1042 |
| BseGI | GGATG | 1 cut(s) | 2477 |
| BseJI | GATNNNNATC | 2 cut(s) | 57, 1172 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 32, 511, 512, 1484 |
| BseMI | GCAATG | 1 cut(s) | 1035 |
| BseMII | CTCAG | 4 cut(s) | 851, 981, 1062, 2282 |
| BseNI | ACTGG | 7 cut(s) | 313, 349, 733, 820, 1622, 1762, 2346 |
| BseXI | GCAGC | 1 cut(s) | 2638 |
| BseYI | CCCAGC | 1 cut(s) | 415 |
| BsgI | GTGCAG | 1 cut(s) | 2033 |
| BshFI | GGCC | 2 cut(s) | 732, 1013 |
| BshVI | ATCGAT | 1 cut(s) | 51 |
| BsiHKAI | GWGCWC | 1 cut(s) | 520 |
| BslFI | GGGAC | 2 cut(s) | 2220, 2420 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 32, 511, 512, 1484 |
| BsmAI | GTCTC | 3 cut(s) | 1060, 2250, 2572 |
| BsmFI | GGGAC | 2 cut(s) | 2220, 2420 |
| BsmI | GAATGC | 1 cut(s) | 746 |
| BsnI | GGCC | 2 cut(s) | 732, 1013 |
| Bso31I | GGTCTC | 1 cut(s) | 2572 |
| Bsp1286I | GDGCHC | 2 cut(s) | 520, 996 |
| Bsp1407I | TGTACA | 1 cut(s) | 429 |
| Bsp143I | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| Bsp19I | CCATGG | 1 cut(s) | 656 |
| BspACI | CCGC | 2 cut(s) | 276, 512 |
| BspANI | GGCC | 2 cut(s) | 732, 1013 |
| BspCNI | CTCAG | 4 cut(s) | 852, 982, 1063, 2283 |
| BspDI | ATCGAT | 1 cut(s) | 51 |
| BspHI | TCATGA | 2 cut(s) | 1780, 2392 |
| BspLI | GGNNCC | 2 cut(s) | 142, 493 |
| BspMI | ACCTGC | 1 cut(s) | 638 |
| BspOI | GCTAGC | 1 cut(s) | 374 |
| BspPI | GGATC | 2 cut(s) | 486, 499 |
| BspQI | GCTCTTC | 1 cut(s) | 921 |
| BspTNI | GGTCTC | 1 cut(s) | 2572 |
| BsrDI | GCAATG | 1 cut(s) | 1035 |
| BsrGI | TGTACA | 1 cut(s) | 429 |
| BsrI | ACTGG | 7 cut(s) | 313, 349, 733, 820, 1622, 1762, 2346 |
| BssECI | CCNNGG | 7 cut(s) | 495, 506, 507, 527, 656, 1041, 1042 |
| BssMI | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| BssSI | CACGAG | 2 cut(s) | 377, 2169 |
| BssT1I | CCWWGG | 2 cut(s) | 495, 656 |
| Bst2BI | CACGAG | 2 cut(s) | 377, 2169 |
| Bst2UI | CCWGG | 4 cut(s) | 120, 508, 1043, 2500 |
| Bst4CI | ACNGT | 6 cut(s) | 829, 1141, 1248, 1329, 2084, 2232 |
| Bst6I | CTCTTC | 3 cut(s) | 921, 1289, 2679 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 667 |
| BstAUI | TGTACA | 1 cut(s) | 429 |
| BstBAI | YACGTR | 3 cut(s) | 191, 248, 452 |
| BstC8I | GCNNGC | 7 cut(s) | 310, 372, 571, 1029, 1389, 1492, 2016 |
| BstDEI | CTNAG | 4 cut(s) | 860, 990, 1071, 2291 |
| BstDSI | CCRYGG | 1 cut(s) | 656 |
| BstEII | GGTNACC | 1 cut(s) | 458 |
| BstF5I | GGATG | 1 cut(s) | 2477 |
| BstH2I | RGCGCY | 1 cut(s) | 2021 |
| BstHHI | GCGC | 2 cut(s) | 1778, 2020 |
| BstKTI | GATC | 6 cut(s) | 449, 494, 854, 1320, 2425, 2436 |
| BstMAI | GTCTC | 3 cut(s) | 1060, 2250, 2572 |
| BstMBI | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 667, 764, 1037, 1500 |
| BstNI | CCWGG | 4 cut(s) | 120, 508, 1043, 2500 |
| BstNSI | RCATGY | 7 cut(s) | 312, 617, 1391, 1430, 1494, 1940, 2727 |
| BstPI | GGTNACC | 1 cut(s) | 458 |
| BstSCI | CCNGG | 4 cut(s) | 118, 506, 1041, 2498 |
| BstSFI | CTRYAG | 1 cut(s) | 1557 |
| BstSNI | TACGTA | 2 cut(s) | 191, 248 |
| BstV1I | GCAGC | 1 cut(s) | 2638 |
| BstV2I | GAAGAC | 2 cut(s) | 1397, 1838 |
| BstX2I | RGATCY | 1 cut(s) | 491 |
| BstYI | RGATCY | 1 cut(s) | 491 |
| Bsu15I | ATCGAT | 1 cut(s) | 51 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1071 |
| BsuRI | GGCC | 2 cut(s) | 732, 1013 |
| BsuTUI | ATCGAT | 1 cut(s) | 51 |
| BtgI | CCRYGG | 1 cut(s) | 656 |
| BtrI | CACGTC | 2 cut(s) | 402, 785 |
| BtsCI | GGATG | 1 cut(s) | 2477 |
| BtsI | GCAGTG | 1 cut(s) | 222 |
| BtsIMutI | CAGTG | 4 cut(s) | 222, 1428, 1615, 2228 |
| BveI | ACCTGC | 1 cut(s) | 638 |
| Cac8I | GCNNGC | 7 cut(s) | 310, 372, 571, 1029, 1389, 1492, 2016 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2499 |
| CciI | TCATGA | 2 cut(s) | 1780, 2392 |
| CfoI | GCGC | 2 cut(s) | 1778, 2020 |
| Cfr13I | GGNCC | 2 cut(s) | 347, 1012 |
| ClaI | ATCGAT | 1 cut(s) | 51 |
| DdeI | CTNAG | 4 cut(s) | 860, 990, 1071, 2291 |
| DpnI | GATC | 6 cut(s) | 448, 493, 853, 1319, 2424, 2435 |
| DpnII | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| DraI | TTTAAA | 2 cut(s) | 22, 1675 |
| Eam1104I | CTCTTC | 3 cut(s) | 921, 1289, 2679 |
| EarI | CTCTTC | 3 cut(s) | 921, 1289, 2679 |
| Eco105I | TACGTA | 2 cut(s) | 191, 248 |
| Eco130I | CCWWGG | 2 cut(s) | 495, 656 |
| Eco24I | GRGCYC | 1 cut(s) | 996 |
| Eco31I | GGTCTC | 1 cut(s) | 2572 |
| Eco32I | GATATC | 1 cut(s) | 1299 |
| Eco47I | GGWCC | 1 cut(s) | 347 |
| Eco57I | CTGAAG | 2 cut(s) | 2181, 2660 |
| Eco72I | CACGTG | 1 cut(s) | 452 |
| Eco81I | CCTNAGG | 1 cut(s) | 1071 |
| Eco91I | GGTNACC | 1 cut(s) | 458 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1012 |
| EcoO65I | GGTNACC | 1 cut(s) | 458 |
| EcoRI | GAATTC | 4 cut(s) | 973, 1114, 1699, 2064 |
| EcoRII | CCWGG | 4 cut(s) | 118, 506, 1041, 2498 |
| EcoRV | GATATC | 1 cut(s) | 1299 |
| EcoT14I | CCWWGG | 2 cut(s) | 495, 656 |
| EcoT22I | ATGCAT | 3 cut(s) | 209, 672, 952 |
| EcoT38I | GRGCYC | 1 cut(s) | 996 |
| ErhI | CCWWGG | 2 cut(s) | 495, 656 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1375, 1407, 1487, 1519, 2095, 2127, 2234, 2266 |
| FaqI | GGGAC | 2 cut(s) | 2220, 2420 |
| FauI | CCCGC | 1 cut(s) | 505 |
| FbaI | TGATCA | 1 cut(s) | 2433 |
| FblI | GTMKAC | 1 cut(s) | 64 |
| Fnu4HI | GCNGC | 1 cut(s) | 2627 |
| FokI | GGATG | 1 cut(s) | 2484 |
| FriOI | GRGCYC | 1 cut(s) | 996 |
| Fsp4HI | GCNGC | 1 cut(s) | 2627 |
| FspBI | CTAG | 4 cut(s) | 113, 305, 371, 437 |
| GlaI | GCGC | 2 cut(s) | 1777, 2019 |
| GluI | GCNGC | 1 cut(s) | 2627 |
| GsaI | CCCAGC | 1 cut(s) | 419 |
| GsuI | CTGGAG | 2 cut(s) | 141, 858 |
| HaeII | RGCGCY | 1 cut(s) | 2021 |
| HaeIII | GGCC | 2 cut(s) | 732, 1013 |
| HhaI | GCGC | 2 cut(s) | 1778, 2020 |
| Hin6I | GCGC | 2 cut(s) | 1776, 2018 |
| HinP1I | GCGC | 2 cut(s) | 1776, 2018 |
| HincII | GTYRAC | 1 cut(s) | 825 |
| HindII | GTYRAC | 1 cut(s) | 825 |
| HindIII | AAGCTT | 1 cut(s) | 1930 |
| HinfI | GANTC | 6 cut(s) | 320, 386, 843, 1232, 1876, 2389 |
| HpaI | GTTAAC | 1 cut(s) | 825 |
| Hpy166II | GTNNAC | 9 cut(s) | 65, 432, 825, 931, 1000, 1460, 1901, 2277, 2360 |
| Hpy188I | TCNGA | 9 cut(s) | 181, 752, 856, 942, 966, 1231, 1666, 1698, 2353 |
| Hpy188III | TCNNGA | 6 cut(s) | 171, 837, 1781, 2171, 2393, 2486 |
| Hpy8I | GTNNAC | 9 cut(s) | 65, 432, 825, 931, 1000, 1460, 1901, 2277, 2360 |
| Hpy99I | CGWCG | 1 cut(s) | 786 |
| HpyAV | CCTTC | 5 cut(s) | 449, 722, 963, 1264, 1592 |
| HpyCH4III | ACNGT | 6 cut(s) | 829, 1141, 1248, 1329, 2084, 2232 |
| HpyCH4IV | ACGT | 7 cut(s) | 190, 247, 401, 451, 784, 981, 1835 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 667, 764, 1037, 1500 |
| HpyF3I | CTNAG | 4 cut(s) | 860, 990, 1071, 2291 |
| HpySE526I | ACGT | 7 cut(s) | 190, 247, 401, 451, 784, 981, 1835 |
| HspAI | GCGC | 2 cut(s) | 1776, 2018 |
| Ksp22I | TGATCA | 1 cut(s) | 2433 |
| KspAI | GTTAAC | 1 cut(s) | 825 |
| Kzo9I | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| LguI | GCTCTTC | 1 cut(s) | 921 |
| LmnI | GCTCC | 2 cut(s) | 515, 2025 |
| Lsp1109I | GCAGC | 1 cut(s) | 2638 |
| LweI | GCATC | 6 cut(s) | 571, 787, 1520, 1925, 2219, 2462 |
| MaeI | CTAG | 4 cut(s) | 113, 305, 371, 437 |
| MaeII | ACGT | 7 cut(s) | 190, 247, 401, 451, 784, 981, 1835 |
| MaeIII | GTNAC | 9 cut(s) | 278, 321, 331, 387, 397, 458, 1341, 1704, 2759 |
| MalI | GATC | 6 cut(s) | 448, 493, 853, 1319, 2424, 2435 |
| MboI | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| MboII | GAAGA | 8 cut(s) | 908, 1057, 1196, 1276, 1397, 1843, 2432, 2666 |
| MfeI | CAATTG | 3 cut(s) | 1125, 2616, 2755 |
| MflI | RGATCY | 1 cut(s) | 491 |
| MhlI | GDGCHC | 2 cut(s) | 520, 996 |
| MlyI | GAGTC | 2 cut(s) | 329, 395 |
| MmeI | TCCRAC | 2 cut(s) | 297, 363 |
| Mph1103I | ATGCAT | 3 cut(s) | 209, 672, 952 |
| MroXI | GAANNNNTTC | 1 cut(s) | 973 |
| MslI | CAYNNNNRTG | 6 cut(s) | 437, 529, 579, 1373, 1448, 2230 |
| MspA1I | CMGCKG | 1 cut(s) | 2290 |
| MspR9I | CCNGG | 4 cut(s) | 120, 508, 1043, 2500 |
| MunI | CAATTG | 3 cut(s) | 1125, 2616, 2755 |
| Mva1269I | GAATGC | 1 cut(s) | 746 |
| MvaI | CCWGG | 4 cut(s) | 120, 508, 1043, 2500 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 667, 764, 1037, 1500 |
| NcoI | CCATGG | 1 cut(s) | 656 |
| NdeII | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| NheI | GCTAGC | 1 cut(s) | 370 |
| NlaIV | GGNNCC | 2 cut(s) | 142, 493 |
| NmuCI | GTSAC | 7 cut(s) | 278, 321, 387, 397, 458, 1341, 2759 |
| NsiI | ATGCAT | 3 cut(s) | 209, 672, 952 |
| NspI | RCATGY | 7 cut(s) | 312, 617, 1391, 1430, 1494, 1940, 2727 |
| OliI | CACNNNNGTG | 3 cut(s) | 437, 529, 1448 |
| PaeI | GCATGC | 3 cut(s) | 312, 1391, 1494 |
| PagI | TCATGA | 2 cut(s) | 1780, 2392 |
| PasI | CCCWGGG | 2 cut(s) | 507, 1042 |
| PciI | ACATGT | 3 cut(s) | 613, 1936, 2723 |
| PciSI | GCTCTTC | 1 cut(s) | 921 |
| PctI | GAATGC | 1 cut(s) | 746 |
| PdmI | GAANNNNTTC | 1 cut(s) | 973 |
| PfeI | GAWTC | 4 cut(s) | 843, 1232, 1876, 2389 |
| PkrI | GCNGC | 1 cut(s) | 2628 |
| PleI | GAGTC | 2 cut(s) | 328, 394 |
| PmaCI | CACGTG | 1 cut(s) | 452 |
| PmlI | CACGTG | 1 cut(s) | 452 |
| PpsI | GAGTC | 2 cut(s) | 328, 394 |
| Ppu21I | YACGTR | 3 cut(s) | 191, 248, 452 |
| PscI | ACATGT | 3 cut(s) | 613, 1936, 2723 |
| PshBI | ATTAAT | 3 cut(s) | 953, 1097, 1886 |
| Psp6I | CCWGG | 4 cut(s) | 118, 506, 1041, 2498 |
| PspCI | CACGTG | 1 cut(s) | 452 |
| PspEI | GGTNACC | 1 cut(s) | 458 |
| PspFI | CCCAGC | 1 cut(s) | 415 |
| PspGI | CCWGG | 4 cut(s) | 118, 506, 1041, 2498 |
| PspN4I | GGNNCC | 2 cut(s) | 142, 493 |
| PspPI | GGNCC | 2 cut(s) | 347, 1012 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1842, 1874 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2499 |
| PsuI | RGATCY | 1 cut(s) | 491 |
| PvuII | CAGCTG | 1 cut(s) | 2290 |
| RseI | CAYNNNNRTG | 6 cut(s) | 437, 529, 579, 1373, 1448, 2230 |
| SapI | GCTCTTC | 1 cut(s) | 921 |
| SatI | GCNGC | 1 cut(s) | 2627 |
| Sau3AI | GATC | 6 cut(s) | 446, 491, 851, 1317, 2422, 2433 |
| Sau96I | GGNCC | 2 cut(s) | 347, 1012 |
| SchI | GAGTC | 2 cut(s) | 329, 395 |
| ScrFI | CCNGG | 4 cut(s) | 120, 508, 1043, 2500 |
| SduI | GDGCHC | 2 cut(s) | 520, 996 |
| SfaNI | GCATC | 6 cut(s) | 571, 787, 1520, 1925, 2219, 2462 |
| SfcI | CTRYAG | 1 cut(s) | 1557 |
| SinI | GGWCC | 1 cut(s) | 347 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 437, 529, 579, 1373, 1448, 2230 |
| SmlI | CTYRAG | 1 cut(s) | 1016 |
| SmoI | CTYRAG | 1 cut(s) | 1016 |
| SnaBI | TACGTA | 2 cut(s) | 191, 248 |
| SphI | GCATGC | 3 cut(s) | 312, 1391, 1494 |
| SsiI | CCGC | 2 cut(s) | 276, 512 |
| SspI | AATATT | 2 cut(s) | 1437, 1725 |
| SspMI | CTAG | 4 cut(s) | 113, 305, 371, 437 |
| StyD4I | CCNGG | 4 cut(s) | 118, 506, 1041, 2498 |
| StyI | CCWWGG | 2 cut(s) | 495, 656 |
| TaaI | ACNGT | 6 cut(s) | 829, 1141, 1248, 1329, 2084, 2232 |
| TaiI | ACGT | 7 cut(s) | 193, 250, 404, 454, 787, 984, 1838 |
| TaqI | TCGA | 1 cut(s) | 51 |
| TatI | WGTACW | 3 cut(s) | 429, 1136, 2794 |
| TfiI | GAWTC | 4 cut(s) | 843, 1232, 1876, 2389 |
| TscAI | CASTG | 4 cut(s) | 222, 1428, 1622, 2235 |
| TseFI | GTSAC | 7 cut(s) | 278, 321, 387, 397, 458, 1341, 2759 |
| TseI | GCWGC | 1 cut(s) | 2626 |
| Tsp45I | GTSAC | 7 cut(s) | 278, 321, 387, 397, 458, 1341, 2759 |
| TspGWI | ACGGA | 2 cut(s) | 1108, 1846 |
| TspRI | CASTG | 4 cut(s) | 222, 1428, 1622, 2235 |
| VpaK11BI | GGWCC | 1 cut(s) | 347 |
| VspI | ATTAAT | 3 cut(s) | 953, 1097, 1886 |
| XceI | RCATGY | 7 cut(s) | 312, 617, 1391, 1430, 1494, 1940, 2727 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2465 |
| XmiI | GTMKAC | 1 cut(s) | 64 |
| XmnI | GAANNNNTTC | 1 cut(s) | 973 |
| XspI | CTAG | 4 cut(s) | 113, 305, 371, 437 |
| Zsp2I | ATGCAT | 3 cut(s) | 209, 672, 952 |