pycom01g02560

adenylylsulfate kinase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2067378 .. 2069074
1697 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 438 bp
ATGGAGAAAGCTGTCACATATAAGGCAAACTTTGAGGAAGAGCATGGTGGCATGTGCTTTGGGTGGGAGTTTGTACCGCAGGGGAAGCTGTCGTACATTCTTGAAGTAGAACATCATGCAGAGAACATTCGGAGGATTGTTTTTCAATTCATCTGGGGTATTTGTTATTTGAACGACACTAAAATTATTTATGGGTTATGGGAACTATGGGTTAAGAAAATGGGTCCAAATTCAGAGCTGCGTTCTTCTTCCCTCAAAATAAGAAGAAAACACTTCCTCAGCACCATATTTCGGCACCTCAGGATCAACTTGGGAAAGAACAGAATAGAGCAGAGCACAAGCATTATCAATTTATTTGCTAAAGTATTGCAGGCTTACAGCTATCTGCACGACTCCAACGAGCCACACCAAGCTTACCATGGGTTTGCACGCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

146

Amino Acids

17.17

Weight (kDa)

9.27

Isoelectric Point (pI)

46.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024288)

Species Orthologous Gene IDs
malus_domestica MD11G1100500.v1.1 MD15G1430000.v1.1
pyrus_communis pycom01g02560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 294
AciI CCGC 1 cut(s) 77
AclWI GGATC 1 cut(s) 311
AcsI RAATTY 1 cut(s) 229
AfaI GTAC 2 cut(s) 75, 95
AfiI CCNNNNNNNGG 1 cut(s) 291
AgsI TTSAA 3 cut(s) 104, 146, 172
AluBI AGCT 5 cut(s) 11, 88, 238, 381, 413
AluI AGCT 5 cut(s) 11, 88, 238, 381, 413
Alw21I GWGCWC 1 cut(s) 338
AlwI GGATC 1 cut(s) 311
ApeKI GCWGC 1 cut(s) 238
ApoI RAATTY 1 cut(s) 229
AspS9I GGNCC 1 cut(s) 224
AvaII GGWCC 1 cut(s) 224
AxyI CCTNAGG 1 cut(s) 299
BanI GGYRCC 1 cut(s) 294
BarI GAAGNNNNNNTAC 2 cut(s) 77, 109
Bbv12I GWGCWC 1 cut(s) 338
BbvCI CCTCAGC 1 cut(s) 278
BbvI GCAGC 1 cut(s) 225
BisI GCNGC 1 cut(s) 239
BlsI GCNGC 1 cut(s) 240
Bme18I GGWCC 1 cut(s) 224
BmgT120I GGNCC 1 cut(s) 224
BmiI GGNNCC 2 cut(s) 225, 296
Bpu10I CCTNAGC 1 cut(s) 278
BsaJI CCNNGG 1 cut(s) 418
Bsc4I CCNNNNNNNGG 1 cut(s) 291
Bse21I CCTNAGG 1 cut(s) 299
BseDI CCNNGG 1 cut(s) 418
BseLI CCNNNNNNNGG 1 cut(s) 291
BseMII CTCAG 2 cut(s) 292, 313
BseXI GCAGC 1 cut(s) 225
BsgI GTGCAG 1 cut(s) 371
BshNI GGYRCC 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 338
BslI CCNNNNNNNGG 1 cut(s) 291
Bsp1286I GDGCHC 1 cut(s) 338
Bsp143I GATC 1 cut(s) 303
Bsp19I CCATGG 1 cut(s) 418
BspACI CCGC 1 cut(s) 77
BspCNI CTCAG 2 cut(s) 291, 312
BspLI GGNNCC 2 cut(s) 225, 296
BspPI GGATC 1 cut(s) 311
BspQI GCTCTTC 1 cut(s) 33
BspT107I GGYRCC 1 cut(s) 294
BssECI CCNNGG 1 cut(s) 418
BssMI GATC 1 cut(s) 303
BssT1I CCWWGG 1 cut(s) 418
Bst6I CTCTTC 1 cut(s) 33
BstC8I GCNNGC 2 cut(s) 372, 430
BstDEI CTNAG 2 cut(s) 278, 299
BstDSI CCRYGG 1 cut(s) 418
BstKTI GATC 1 cut(s) 306
BstMBI GATC 1 cut(s) 303
BstMWI GCNNNNNNNGC 1 cut(s) 85
BstNSI RCATGY 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 225
Bsu36I CCTNAGG 1 cut(s) 299
BtgI CCRYGG 1 cut(s) 418
Cac8I GCNNGC 2 cut(s) 372, 430
Cfr13I GGNCC 1 cut(s) 224
Csp6I GTAC 2 cut(s) 74, 94
CviAII CATG 4 cut(s) 44, 52, 116, 419
CviJI RGCY 7 cut(s) 11, 88, 238, 374, 381, 403, 413
CviKI_1 RGCY 7 cut(s) 11, 88, 238, 374, 381, 403, 413
CviQI GTAC 2 cut(s) 74, 94
DdeI CTNAG 2 cut(s) 278, 299
DpnI GATC 1 cut(s) 305
DpnII GATC 1 cut(s) 303
Eam1104I CTCTTC 1 cut(s) 33
EarI CTCTTC 1 cut(s) 33
Eco130I CCWWGG 1 cut(s) 418
Eco47I GGWCC 1 cut(s) 224
Eco81I CCTNAGG 1 cut(s) 299
EcoT14I CCWWGG 1 cut(s) 418
ErhI CCWWGG 1 cut(s) 418
FaeI CATG 4 cut(s) 47, 55, 119, 422
FalI AAGNNNNNCTT 2 cut(s) 14, 46
FatI CATG 4 cut(s) 43, 51, 115, 418
Fnu4HI GCNGC 1 cut(s) 239
Fsp4HI GCNGC 1 cut(s) 239
GluI GCNGC 1 cut(s) 239
Hin1II CATG 4 cut(s) 47, 55, 119, 422
HindIII AAGCTT 1 cut(s) 411
HinfI GANTC 1 cut(s) 392
Hpy188I TCNGA 2 cut(s) 132, 235
Hpy188III TCNNGA 2 cut(s) 101, 301
HpyCH4V TGCA 4 cut(s) 119, 370, 388, 428
HpyF10VI GCNNNNNNNGC 1 cut(s) 85
HpyF3I CTNAG 2 cut(s) 278, 299
Hsp92II CATG 4 cut(s) 47, 55, 119, 422
Kzo9I GATC 1 cut(s) 303
LguI GCTCTTC 1 cut(s) 33
LpnPI CCDG 4 cut(s) 65, 139, 286, 356
Lsp1109I GCAGC 1 cut(s) 225
MaeIII GTNAC 1 cut(s) 13
MalI GATC 1 cut(s) 305
MboI GATC 1 cut(s) 303
MboII GAAGA 4 cut(s) 50, 237, 240, 276
MhlI GDGCHC 1 cut(s) 338
MluCI AATT 4 cut(s) 146, 183, 229, 349
MlyI GAGTC 1 cut(s) 386
MmeI TCCRAC 1 cut(s) 420
MnlI CCTC 5 cut(s) 28, 126, 263, 287, 308
MseI TTAA 1 cut(s) 213
MwoI GCNNNNNNNGC 1 cut(s) 85
NcoI CCATGG 1 cut(s) 418
NdeII GATC 1 cut(s) 303
NlaIII CATG 4 cut(s) 47, 55, 119, 422
NlaIV GGNNCC 2 cut(s) 225, 296
NmuCI GTSAC 1 cut(s) 13
NspI RCATGY 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 33
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PkrI GCNGC 1 cut(s) 240
PleI GAGTC 1 cut(s) 386
PpsI GAGTC 1 cut(s) 386
PspN4I GGNNCC 2 cut(s) 225, 296
PspPI GGNCC 1 cut(s) 224
RsaI GTAC 2 cut(s) 75, 95
RsaNI GTAC 2 cut(s) 74, 94
SapI GCTCTTC 1 cut(s) 33
SaqAI TTAA 1 cut(s) 213
SatI GCNGC 1 cut(s) 239
Sau3AI GATC 1 cut(s) 303
Sau96I GGNCC 1 cut(s) 224
SchI GAGTC 1 cut(s) 386
SduI GDGCHC 1 cut(s) 338
SetI ASST 6 cut(s) 13, 90, 240, 300, 383, 415
SinI GGWCC 1 cut(s) 224
Sse9I AATT 4 cut(s) 146, 183, 229, 349
SsiI CCGC 1 cut(s) 77
StyI CCWWGG 1 cut(s) 418
TasI AATT 4 cut(s) 146, 183, 229, 349
Tru1I TTAA 1 cut(s) 213
Tru9I TTAA 1 cut(s) 213
TseFI GTSAC 1 cut(s) 13
TseI GCWGC 1 cut(s) 238
Tsp45I GTSAC 1 cut(s) 13
TspDTI ATGAA 1 cut(s) 139
VpaK11BI GGWCC 1 cut(s) 224
XapI RAATTY 1 cut(s) 229
XceI RCATGY 1 cut(s) 55
XcmI CCANNNNNNNNNTGG 1 cut(s) 416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.