pycom01g03360

Delta(8)-fatty-acid desaturase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2602463 .. 2608137
5675 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g03360.33

Sequence Viewer

Length: 4116 bp
ATGGCAGCCATACAAGGGAATATAGGCCTACGAAGGGACATAATGGTTGACAAGAGAAGTGCTCAGTTACGAATCCCCACCAACTTCGAGGGCCGAGCAAGGCGCTTGGTCGCGTCATCCCAAGAAAGGACACAAGTGGACCTACGCAACACTACTACAAAAGTACCCAGTAGTGTCATTTTAGAAAGCGACAAGAAAAACTCATTCATAGCGGATAGAAGAACCGACAGCATTGCTAGCGTCACGAAAAGGCTTTTGATGTCGATTAGTTCCCTTAATCCGCCAAGAAAAAGGAAAGCGTTTACAAATAAAAAAATGACAATAGTGTCAGAGAAAATAATAATAATAATAAATTTAAAAACTAAAAACACAAACCAATTTAACAGAATTCTAATACCAAAACCAACTAAAAAAATTCAAGACCAATTAAGCGAATTTGCAAAAAAACTATGGATTTTCAAGTCAAAAAATTTCACTTTTTCAGTAATTTTCAAATCAAAACAAAACACAATAATAACAAAAAAAAAATCACTTATGCATTCAATCGAAATTAATCAAACCCAAGAATCGATTTCCATCAATAAAGAGACAGCGATACATACCTGCTCGTTGACCTGCTCCACTACAACGCCACCTGTTGCTGTTGTAGAACTAATCTCCACCTCCTTTGAAAGGCAAAACCTTTTTAAATTCAATTCCAGAAAAAAATTTAAACATTTTCTAAAAAAGAGATTGAAAGTTTTAAGGAGTAGTGGAAAGAGAGCCGTGAGAATGCTTCGAAGGGGTAAGGTGAAGGGAGATGAAGGGAGAGCAGTGCTAAGCGGCAAAACTAGCGTCGGACAAAACCTACAACATATATTAATTTCGTTGGTTAAAACTGACAGCACCCTGAGCCCACTGACATCACTTTTGCCACATCCCAGCCCGGGCCCCCACCACATCCCGGGCTCGACTCCACTGTATTTTGTTTCTGGGAACTCACACGAGAACTTCCTAATGGTTCACCCATCCTGGGATTGCTCTCGTGCTAACTCACTTAACTTTGGAGTTCCTACAGAACCCAAAGCCAGTGAGCTCCCAAAAGGCCTCGATCCACTTCCCTGGGCAATGTGGGATGTTACAATCCACCCCCCTAAGGGGCCCGACGTCCTCGTCGGCACACCACGGCCAGTGCTAGGCTCTGATACCAAATTGTCACATCCTGGCCCAGTGTCCACTTTGGGCCCCGACCACACCCTTATGGTTTTGTTTCTGGGAACTCACACAGGAACTTCCCAATGGGTCACCCATCCTGGGATTGCTCTCGTGCGAACTCGCTTAACTTTAGAGTTCTTACGGAACCCGAAGCCAGTGAGCTCCCAAAAGGCCTCGATCCACTCCCCTGGGCAATGTGGGATGTTACAACTCTACCCAACTCCGAGTGTAAAATGTGATGACATGTCCCTACTTTTTCACTGTGATTTCTTTTCTGTTGGGGTGATTTCATTTTTTTGGTTTCCTACTAAATTAGTACTCGTCATCACGAACGCGTGGACGCTAGTTAGACCCAAATCGGATTTGGGTATTTTTGGAGGCATATTTTGTACATTAAAAATTGTAAAAAATCCACCAATCCCTTCCTTAATTGGTGGATCCGGTTCCCTTCACCAATCAAATTCCTTCAATCCCTCTCCACCACTCATATCTTCTCCCTCTTTTACTTCACCAATCAAGAACTCCCTCTCACTGTTATTTTTAGAACGCAACTCTCTCTCTCTCCCCAAAGACTCTCTCTCACACTCACACTCTCACTCTGCAACTCCCTCAAACAGACACCACAACACACAAACGTGGCTTGAAAACCACACCGTCGAACTAGTCTCATCACCACAAACACAACCAAGCTCCGACTTGGTTCAGTTTTTCCCTGACGAGTTGCAAACAAGTTATGAGTTTGGGGAACCTTTGACGTTAAACAACCCGATTTTGAGCAATCCCAGTTTTAGCCGTACTTTTCGAGGCTTTTTCAGGCCACCTCTGTTCACTTTTTGGACTCCAAAAAGGTATAACATGATTCTACTCTTCATAAATGAAGGTTTGAAATTCTACCCAGAAACTAGCAAAAATTTCCAAAATCCGGCGAGCTTAGACGGCGGTGGACGGCGAGGGCCACCGGAGAAGATGACGGAATATTCTAACAGTTCCGTCAAACTGACGGAACTGACGGACATCAGGCGTTTGCCTATGTGTGGTGATGTGTATGGCCATGCCTTAGCCAGTATTGATTTCATATATTTAAACCCTAGGTTTGAGCAAACTATGGAGGTTTTATTTAAGTTTCCGTTATGTGTTATTAAACTAAGATGTACAAGGTCAAGCAAGGCTTGGAGACTTCGTTTCAACTACGTAGTTGTGAGTGGGCAAATTTTTTTTATACCTATACATAGTTATAGTTTCGACAAATGCGTATTTACTCTATTTTTACGCTTATTTTGCCAAGGTTGGGATATTACTGTCATGTACATGCTTATCTTGCTGCACCTCGGTGTTAATACTCCGCCCGGGGCCAGGGCCAGTCCTTCACGTGTATGTTCACATCCGCTTAGGGCGAAGTTAGGTGCCAGTCCTGTCGTACATATTGCATTAGGCAATTCTGACTCGTATAGTGTATTGATTACACCCAATCCTATCGTACAGGTTGCGTTAAGCAACTCCGACTCGTGTGCTATATATTACTGTGGCATTTGGTATATTATGACTTTGCATATTTCTGGTTATATTGCTGTTGTATTTTTGTTACATACTTACGTAGTATGTTTTACGAAAACTATACTTGTTTTACAGCGAGGGGTTACTATGTTAAAAAATAAAGGTTTTCTTACAAACGTTGTTTTGCTGACCCACTCAATTTTGTTTTTCGCCCCTCTAGGTTTGGTAGGTTATCTTCAGTGGTATAACCCTCGTCCTATTTACTATATTGTCTTATGCTCTGACATCACGTGTGAAATGACTTCAATCCCGCTCACCTCACATCCTTTCTCCACTACACTACACTACACTTTATGGCTTCGTCATCCCCCAAGTGTCGGCCATCACAACTCGATTCAGAGTCCACATGGACATTCCGGGTCAGGGTGTGTCACAAAACTAGCAAGAAAATTCTCGCCCAAATATTTCACATCAATTTCGTCAGATAAAACCAACATTATGATATCCGACACAAGTTTGAAAATATTAAAAAAAAAAAAAAAAACAAAAAGCAAATTTAAAAACAAAAAGAAAATCTTGTCGGTTATAAGCGACAAGAATACCAACATTAAGCTATGCGACACAAGTTTGAAAATATTACTGCTTTGTTATCCGACATCATCTAAACAGGCTGTCAGAAATGTCTTTTTGAACAGTACATTCAAATCCGTACTGCCACAATTCAAAGTCTACCATGGTAACCCAATCTATGTCATCGCCATCTTCAAAAGGCACCTCCATAGTACCAAAACCCTTTGTTTGCCAGATAAAATACTTGTTGCTTCAAACGTTGCATCTGACCATAGTAGGACCTTAGTGGGAGATGGGTTCATACTGCTCGAGATGTGGATTATGGATACATATATAGGTGTCACCATCATACCAATAACTGCCAAGCTATACTCCAAAAAATACCGCATGTCACTATCGTCCCTAATGAACACAATGTTTGAATATAGATCCAAAAAACTCAAACACAAGGATTTTCTTAGTTTGATTTTTGTTTATCAAGACATCTTGCTCTCGTTTTCGAGGCAGAATGTCCCGAACGAAGGATTGAACATCATGGGTATCCTTGTTTTCTGGACATGGTTTCCTCTCCTCGTTTCGTGTTTGCCCAGTGAGAGGGTTATGTTTGTGCTAGTAGCATTTTCATTGACATCACTCAAGCACATCCAGTTCACATCGAGTCATTTCTCCGGCAACACCTATCGAACATCATTTGTTTCCGCGAATGCTTCGTGGATAACTGAGGAAGATTATTATACAACAATTGCACAGTTTATTTCGAATAGAAATTTCACAAGGATACAATATATATATATATATATATATATATATATATATATATATATCTTACAATATAAACAATTAATAAAACCGAATTAA

Protein Analysis

1372

Amino Acids

154.95

Weight (kDa)

9.9

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024606)

Species Orthologous Gene IDs
pyrus_communis pycom01g03360 pycom05g07610 pycom17g12390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3275
AasI GACNNNNNNGTC 2 cut(s) 325, 1151
AatII GACGTC 1 cut(s) 1149
Acc36I ACCTGC 2 cut(s) 611, 623
AccB1I GGYRCC 2 cut(s) 2597, 3459
AccBSI CCGCTC 1 cut(s) 3001
AccI GTMKAC 1 cut(s) 3417
AccII CGCG 3 cut(s) 113, 1529, 3959
AciI CCGC 9 cut(s) 212, 281, 822, 2133, 2537, 2579, 2999, 3643, 3957
AclI AACGTT 2 cut(s) 2865, 3516
AclWI GGATC 5 cut(s) 1085, 1366, 1626, 1639, 3681
AcoI YGGCCR 3 cut(s) 1166, 2242, 3067
AcuI CTGAAG 1 cut(s) 2909
AcvI CACGTG 2 cut(s) 2564, 2979
AcyI GRCGYC 1 cut(s) 1146
AflIII ACRYGT 4 cut(s) 1437, 1527, 2563, 2978
AhlI ACTAGT 1 cut(s) 1855
AjnI CCWGG 6 cut(s) 1010, 1100, 1201, 1291, 1381, 2546
AleI CACNNNNGTG 2 cut(s) 1828, 2523
AluBI AGCT 6 cut(s) 1075, 1356, 1884, 2124, 3301, 3625
AluI AGCT 6 cut(s) 1075, 1356, 1884, 2124, 3301, 3625
Alw21I GWGCWC 3 cut(s) 64, 1077, 1358
Alw26I GTCTC 3 cut(s) 581, 1864, 2362
AlwI GGATC 5 cut(s) 1085, 1366, 1626, 1639, 3681
Ama87I CYCGRG 4 cut(s) 925, 943, 2540, 3566
ApaI GGGCCC 3 cut(s) 932, 1143, 1226
ApeKI GCWGC 2 cut(s) 5, 2515
ArsI GACNNNNNNTTYG 4 cut(s) 819, 851, 892, 924
AseI ATTAAT 3 cut(s) 552, 860, 4100
AspA2I CCTAGG 1 cut(s) 2282
AspLEI GCGC 1 cut(s) 105
AsuC2I CCSGG 7 cut(s) 926, 927, 944, 945, 2541, 2542, 3106
AsuII TTCGAA 2 cut(s) 778, 4016
AsuNHI GCTAGC 1 cut(s) 236
AvaI CYCGRG 4 cut(s) 925, 943, 2540, 3566
AvaII GGWCC 2 cut(s) 139, 3537
AvrII CCTAGG 1 cut(s) 2282
AxyI CCTNAGG 1 cut(s) 1134
BaeGI GKGCMC 3 cut(s) 932, 1143, 1226
BaeI ACNNNNGTAYC 2 cut(s) 147, 180
BalI TGGCCA 1 cut(s) 2244
BamHI GGATCC 1 cut(s) 1631
BanI GGYRCC 2 cut(s) 2597, 3459
BanII GRGCYC 7 cut(s) 896, 932, 950, 1077, 1143, 1226, 1358
BarI GAAGNNNNNNTAC 2 cut(s) 2907, 2939
BauI CACGAG 4 cut(s) 983, 1023, 1304, 2698
BbrPI CACGTG 2 cut(s) 2564, 2979
Bbv12I GWGCWC 3 cut(s) 64, 1077, 1358
BbvI GCAGC 2 cut(s) 17, 2502
BccI CCATC 7 cut(s) 584, 1015, 1296, 3078, 3455, 3545, 3611
BceAI ACGGC 5 cut(s) 749, 1181, 1971, 2146, 2156
BcgI CGANNNNNNTGC 4 cut(s) 215, 249, 2684, 2718
BciT130I CCWGG 6 cut(s) 1012, 1102, 1203, 1293, 1383, 2548
BciVI GTATCC 3 cut(s) 3577, 3809, 4029
BcnI CCSGG 7 cut(s) 926, 927, 944, 945, 2541, 2542, 3106
BcoDI GTCTC 3 cut(s) 581, 1864, 2362
BcuI ACTAGT 1 cut(s) 1855
BfmI CTRYAG 1 cut(s) 1053
BfoI RGCGCY 1 cut(s) 106
BfuAI ACCTGC 2 cut(s) 611, 623
BfuI GTATCC 3 cut(s) 3577, 3809, 4029
BisI GCNGC 3 cut(s) 6, 823, 2516
BlnI CCTAGG 1 cut(s) 2282
BlpI GCTNAGC 1 cut(s) 818
BlsI GCNGC 3 cut(s) 7, 824, 2517
BmcAI AGTACT 1 cut(s) 1512
Bme18I GGWCC 2 cut(s) 139, 3537
BmeT110I CYCGRG 4 cut(s) 925, 943, 2540, 3566
BmrI ACTGGG 4 cut(s) 162, 1202, 1971, 3840
BmsI GCATC 1 cut(s) 3530
BmtI GCTAGC 1 cut(s) 240
BmuI ACTGGG 4 cut(s) 162, 1202, 1971, 3840
BplI GAGNNNNNCTC 2 cut(s) 46, 78
Bpu10I CCTNAGC 3 cut(s) 890, 2251, 2582
Bpu1102I GCTNAGC 1 cut(s) 818
Bpu14I TTCGAA 2 cut(s) 778, 4016
BpuEI CTTGAG 1 cut(s) 3878
BpuMI CCSGG 7 cut(s) 926, 927, 944, 945, 2541, 2542, 3106
Bsa29I ATCGAT 1 cut(s) 569
BsaAI YACGTR 4 cut(s) 2386, 2564, 2788, 2979
BsaBI GATNNNNATC 1 cut(s) 575
BsaHI GRCGYC 1 cut(s) 1146
BsaWI WCCGGW 2 cut(s) 1634, 2152
BsaXI ACNNNNNCTCC 2 cut(s) 2359, 2389
Bse21I CCTNAGG 1 cut(s) 1134
Bse3DI GCAATG 3 cut(s) 231, 1113, 1394
Bse8I GATNNNNATC 1 cut(s) 575
BseBI CCWGG 6 cut(s) 1012, 1102, 1203, 1293, 1383, 2548
BseCI ATCGAT 1 cut(s) 569
BseJI GATNNNNATC 1 cut(s) 575
BseMI GCAATG 3 cut(s) 231, 1113, 1394
BseMII CTCAG 3 cut(s) 77, 881, 3969
BseRI GAGGAG 1 cut(s) 3818
BseSI GKGCMC 3 cut(s) 932, 1143, 1226
BseXI GCAGC 2 cut(s) 17, 2502
BseYI CCCAGC 1 cut(s) 920
BsgI GTGCAG 1 cut(s) 2501
Bsh1236I CGCG 3 cut(s) 113, 1529, 3959
BshNI GGYRCC 2 cut(s) 2597, 3459
BshVI ATCGAT 1 cut(s) 569
BsiHKAI GWGCWC 3 cut(s) 64, 1077, 1358
BsiHKCI CYCGRG 4 cut(s) 925, 943, 2540, 3566
BsiSI CCGG 8 cut(s) 926, 944, 1635, 2117, 2153, 2541, 3105, 3927
BslFI GGGAC 4 cut(s) 50, 1426, 3643, 3755
BsmAI GTCTC 3 cut(s) 581, 1864, 2362
BsmFI GGGAC 4 cut(s) 50, 1426, 3643, 3755
BsmI GAATGC 3 cut(s) 538, 777, 3967
BsoBI CYCGRG 4 cut(s) 925, 943, 2540, 3566
Bsp119I TTCGAA 2 cut(s) 778, 4016
Bsp120I GGGCCC 3 cut(s) 928, 1139, 1222
Bsp1286I GDGCHC 8 cut(s) 64, 896, 932, 950, 1077, 1143, 1226, 1358
Bsp1407I TGTACA 3 cut(s) 1583, 2345, 2499
Bsp143I GATC 4 cut(s) 1090, 1371, 1631, 3686
Bsp1720I GCTNAGC 1 cut(s) 818
Bsp19I CCATGG 1 cut(s) 3421
BspACI CCGC 9 cut(s) 212, 281, 822, 2133, 2537, 2579, 2999, 3643, 3957
BspCNI CTCAG 3 cut(s) 76, 882, 3970
BspDI ATCGAT 1 cut(s) 569
BspFNI CGCG 3 cut(s) 113, 1529, 3959
BspMI ACCTGC 2 cut(s) 611, 623
BspOI GCTAGC 1 cut(s) 240
BspPI GGATC 5 cut(s) 1085, 1366, 1626, 1639, 3681
BspT104I TTCGAA 2 cut(s) 778, 4016
BspT107I GGYRCC 2 cut(s) 2597, 3459
BsrBI CCGCTC 1 cut(s) 3001
BsrDI GCAATG 3 cut(s) 231, 1113, 1394
BsrGI TGTACA 3 cut(s) 1583, 2345, 2499
BssMI GATC 4 cut(s) 1090, 1371, 1631, 3686
BssNI GRCGYC 1 cut(s) 1146
BssSI CACGAG 4 cut(s) 983, 1023, 1304, 2698
BssT1I CCWWGG 3 cut(s) 2282, 2476, 3421
Bst2BI CACGAG 4 cut(s) 983, 1023, 1304, 2698
Bst2UI CCWGG 6 cut(s) 1012, 1102, 1203, 1293, 1383, 2548
Bst4CI ACNGT 9 cut(s) 960, 1457, 1728, 1849, 2180, 2494, 2717, 3383, 4008
Bst6I CTCTTC 1 cut(s) 2066
BstACI GRCGYC 1 cut(s) 1146
BstAUI TGTACA 3 cut(s) 1583, 2345, 2499
BstBAI YACGTR 4 cut(s) 2386, 2564, 2788, 2979
BstBI TTCGAA 2 cut(s) 778, 4016
BstC8I GCNNGC 2 cut(s) 238, 2122
BstDSI CCRYGG 2 cut(s) 1163, 3421
BstEII GGTNACC 2 cut(s) 1282, 3425
BstENI CCTNNNNNAGG 1 cut(s) 670
BstFNI CGCG 3 cut(s) 113, 1529, 3959
BstH2I RGCGCY 1 cut(s) 106
BstHHI GCGC 1 cut(s) 105
BstKTI GATC 4 cut(s) 1093, 1374, 1634, 3689
BstMAI GTCTC 3 cut(s) 581, 1864, 2362
BstMBI GATC 4 cut(s) 1090, 1371, 1631, 3686
BstMWI GCNNNNNNNGC 6 cut(s) 237, 831, 891, 2130, 2472, 2512
BstNI CCWGG 6 cut(s) 1012, 1102, 1203, 1293, 1383, 2548
BstNSI RCATGY 3 cut(s) 1441, 2506, 3649
BstPI GGTNACC 2 cut(s) 1282, 3425
BstSFI CTRYAG 1 cut(s) 1053
BstSLI GKGCMC 3 cut(s) 932, 1143, 1226
BstSNI TACGTA 2 cut(s) 2386, 2788
BstUI CGCG 3 cut(s) 113, 1529, 3959
BstV1I GCAGC 2 cut(s) 17, 2502
BstX2I RGATCY 2 cut(s) 1631, 3686
BstXI CCANNNNNNTGG 2 cut(s) 1101, 1382
BstYI RGATCY 2 cut(s) 1631, 3686
Bsu15I ATCGAT 1 cut(s) 569
Bsu36I CCTNAGG 1 cut(s) 1134
BsuI GTATCC 3 cut(s) 3577, 3809, 4029
BsuTUI ATCGAT 1 cut(s) 569
BtgI CCRYGG 2 cut(s) 1163, 3421
BtgZI GCGATG 1 cut(s) 3427
BtsI GCAGTG 1 cut(s) 819
BveI ACCTGC 2 cut(s) 611, 623
Cac8I GCNNGC 2 cut(s) 238, 2122
CfoI GCGC 1 cut(s) 105
Cfr9I CCCGGG 3 cut(s) 925, 943, 2540
ClaI ATCGAT 1 cut(s) 569
CseI GACGC 4 cut(s) 102, 229, 823, 1543
CspCI CAANNNNNGTGG 2 cut(s) 649, 684
DpnI GATC 4 cut(s) 1092, 1373, 1633, 3688
DpnII GATC 4 cut(s) 1090, 1371, 1631, 3686
DraI TTTAAA 5 cut(s) 357, 688, 712, 2277, 3247
DrdI GACNNNNNNGTC 2 cut(s) 325, 1151
DseDI GACNNNNNNGTC 2 cut(s) 325, 1151
EaeI YGGCCR 3 cut(s) 1166, 2242, 3067
Eam1104I CTCTTC 1 cut(s) 2066
EarI CTCTTC 1 cut(s) 2066
EciI GGCGGA 2 cut(s) 270, 2526
Ecl136II GAGCTC 2 cut(s) 1075, 1356
Eco105I TACGTA 2 cut(s) 2386, 2788
Eco130I CCWWGG 3 cut(s) 2282, 2476, 3421
Eco147I AGGCCT 3 cut(s) 27, 1086, 1367
Eco24I GRGCYC 7 cut(s) 896, 932, 950, 1077, 1143, 1226, 1358
Eco32I GATATC 1 cut(s) 3192
Eco47I GGWCC 2 cut(s) 139, 3537
Eco53kI GAGCTC 2 cut(s) 1075, 1356
Eco57I CTGAAG 1 cut(s) 2909
Eco72I CACGTG 2 cut(s) 2564, 2979
Eco81I CCTNAGG 1 cut(s) 1134
Eco88I CYCGRG 4 cut(s) 925, 943, 2540, 3566
Eco91I GGTNACC 2 cut(s) 1282, 3425
EcoICRI GAGCTC 2 cut(s) 1075, 1356
EcoNI CCTNNNNNAGG 1 cut(s) 670
EcoO109I RGGNCCY 4 cut(s) 929, 1139, 1223, 3537
EcoO65I GGTNACC 2 cut(s) 1282, 3425
EcoRI GAATTC 1 cut(s) 387
EcoRII CCWGG 6 cut(s) 1010, 1100, 1201, 1291, 1381, 2546
EcoRV GATATC 1 cut(s) 3192
EcoT14I CCWWGG 3 cut(s) 2282, 2476, 3421
EcoT22I ATGCAT 1 cut(s) 540
EcoT38I GRGCYC 7 cut(s) 896, 932, 950, 1077, 1143, 1226, 1358
ErhI CCWWGG 3 cut(s) 2282, 2476, 3421
FalI AAGNNNNNCTT 6 cut(s) 2347, 2379, 2841, 2873, 3248, 3280
FaqI GGGAC 4 cut(s) 50, 1426, 3643, 3755
FauI CCCGC 1 cut(s) 3006
FblI GTMKAC 1 cut(s) 3417
Fnu4HI GCNGC 3 cut(s) 6, 823, 2516
FriOI GRGCYC 7 cut(s) 896, 932, 950, 1077, 1143, 1226, 1358
Fsp4HI GCNGC 3 cut(s) 6, 823, 2516
GlaI GCGC 1 cut(s) 104
GluI GCNGC 3 cut(s) 6, 823, 2516
GsaI CCCAGC 1 cut(s) 924
HaeII RGCGCY 1 cut(s) 106
HapII CCGG 8 cut(s) 926, 944, 1635, 2117, 2153, 2541, 3105, 3927
HgaI GACGC 4 cut(s) 102, 229, 823, 1543
HhaI GCGC 1 cut(s) 105
Hin1I GRCGYC 1 cut(s) 1146
Hin6I GCGC 1 cut(s) 103
HinP1I GCGC 1 cut(s) 103
HincII GTYRAC 2 cut(s) 49, 612
HindII GTYRAC 2 cut(s) 49, 612
HpaII CCGG 8 cut(s) 926, 944, 1635, 2117, 2153, 2541, 3105, 3927
Hpy188III TCNNGA 9 cut(s) 244, 419, 699, 1522, 1711, 3568, 3737, 3772, 3811
Hpy99I CGWCG 4 cut(s) 839, 1148, 1157, 1853
HpyCH4III ACNGT 9 cut(s) 960, 1457, 1728, 1849, 2180, 2494, 2717, 3383, 4008
HpyCH4IV ACGT 9 cut(s) 1146, 1829, 1949, 2385, 2563, 2787, 2865, 2978, 3516
HpyCH4V TGCA 9 cut(s) 440, 538, 1796, 1918, 2518, 2621, 2743, 3521, 4004
HpyF10VI GCNNNNNNNGC 6 cut(s) 237, 831, 891, 2130, 2472, 2512
HpySE526I ACGT 9 cut(s) 1146, 1829, 1949, 2385, 2563, 2787, 2865, 2978, 3516
Hsp92I GRCGYC 1 cut(s) 1146
HspAI GCGC 1 cut(s) 103
Kzo9I GATC 4 cut(s) 1090, 1371, 1631, 3686
LmnI GCTCC 4 cut(s) 623, 1080, 1361, 1889
Lsp1109I GCAGC 2 cut(s) 17, 2502
LweI GCATC 1 cut(s) 3530
MaeII ACGT 9 cut(s) 1146, 1829, 1949, 2385, 2563, 2787, 2865, 2978, 3516
MalI GATC 4 cut(s) 1092, 1373, 1633, 3688
MbiI CCGCTC 1 cut(s) 3001
MboI GATC 4 cut(s) 1090, 1371, 1631, 3686
MboII GAAGA 7 cut(s) 231, 1677, 2053, 2170, 2915, 3442, 3995
MfeI CAATTG 1 cut(s) 3999
MflI RGATCY 2 cut(s) 1631, 3686
MhlI GDGCHC 8 cut(s) 64, 896, 932, 950, 1077, 1143, 1226, 1358
MlsI TGGCCA 1 cut(s) 2244
MluI ACGCGT 1 cut(s) 1527
MluNI TGGCCA 1 cut(s) 2244
MlyI GAGTC 7 cut(s) 946, 1760, 2026, 2630, 2690, 3097, 3925
MmeI TCCRAC 5 cut(s) 817, 1911, 2718, 3219, 3365
Mox20I TGGCCA 1 cut(s) 2244
Mph1103I ATGCAT 1 cut(s) 540
MscI TGGCCA 1 cut(s) 2244
MslI CAYNNNNRTG 5 cut(s) 1238, 1828, 2501, 2523, 2566
Msp20I TGGCCA 1 cut(s) 2244
MspI CCGG 8 cut(s) 926, 944, 1635, 2117, 2153, 2541, 3105, 3927
MunI CAATTG 1 cut(s) 3999
Mva1269I GAATGC 3 cut(s) 538, 777, 3967
MvaI CCWGG 6 cut(s) 1012, 1102, 1203, 1293, 1383, 2548
MvnI CGCG 3 cut(s) 113, 1529, 3959
MwoI GCNNNNNNNGC 6 cut(s) 237, 831, 891, 2130, 2472, 2512
NciI CCSGG 7 cut(s) 926, 927, 944, 945, 2541, 2542, 3106
NcoI CCATGG 1 cut(s) 3421
NdeII GATC 4 cut(s) 1090, 1371, 1631, 3686
NheI GCTAGC 1 cut(s) 236
NmeAIII GCCGAG 1 cut(s) 119
NmuCI GTSAC 6 cut(s) 241, 1194, 1282, 3118, 3598, 3648
NsiI ATGCAT 1 cut(s) 540
NspI RCATGY 3 cut(s) 1441, 2506, 3649
NspV TTCGAA 2 cut(s) 778, 4016
OliI CACNNNNGTG 2 cut(s) 1828, 2523
PaeR7I CTCGAG 1 cut(s) 3566
PasI CCCWGGG 2 cut(s) 1101, 1382
PceI AGGCCT 3 cut(s) 27, 1086, 1367
PciI ACATGT 1 cut(s) 1437
PcsI WCGNNNNNNNCGW 1 cut(s) 2442
PctI GAATGC 3 cut(s) 538, 777, 3967
PfeI GAWTC 4 cut(s) 72, 566, 2053, 3082
PkrI GCNGC 3 cut(s) 7, 824, 2517
PleI GAGTC 7 cut(s) 946, 1760, 2026, 2630, 2690, 3096, 3924
PmaCI CACGTG 2 cut(s) 2564, 2979
PmlI CACGTG 2 cut(s) 2564, 2979
PpsI GAGTC 7 cut(s) 946, 1760, 2026, 2630, 2690, 3096, 3924
Ppu21I YACGTR 4 cut(s) 2386, 2564, 2788, 2979
PpuMI RGGWCCY 1 cut(s) 3537
PscI ACATGT 1 cut(s) 1437
PshBI ATTAAT 3 cut(s) 552, 860, 4100
PsiI TTATAA 1 cut(s) 3275
Psp124BI GAGCTC 2 cut(s) 1077, 1358
Psp1406I AACGTT 2 cut(s) 2865, 3516
Psp5II RGGWCCY 1 cut(s) 3537
Psp6I CCWGG 6 cut(s) 1010, 1100, 1201, 1291, 1381, 2546
PspCI CACGTG 2 cut(s) 2564, 2979
PspEI GGTNACC 2 cut(s) 1282, 3425
PspFI CCCAGC 1 cut(s) 920
PspGI CCWGG 6 cut(s) 1010, 1100, 1201, 1291, 1381, 2546
PspOMI GGGCCC 3 cut(s) 928, 1139, 1222
PspPPI RGGWCCY 1 cut(s) 3537
PsuI RGATCY 2 cut(s) 1631, 3686
RseI CAYNNNNRTG 5 cut(s) 1238, 1828, 2501, 2523, 2566
SacI GAGCTC 2 cut(s) 1077, 1358
SatI GCNGC 3 cut(s) 6, 823, 2516
Sau3AI GATC 4 cut(s) 1090, 1371, 1631, 3686
ScaI AGTACT 1 cut(s) 1512
SchI GAGTC 7 cut(s) 946, 1760, 2026, 2630, 2690, 3097, 3925
SduI GDGCHC 8 cut(s) 64, 896, 932, 950, 1077, 1143, 1226, 1358
SfaNI GCATC 1 cut(s) 3530
SfcI CTRYAG 1 cut(s) 1053
Sfr274I CTCGAG 1 cut(s) 3566
SfuI TTCGAA 2 cut(s) 778, 4016
SinI GGWCC 2 cut(s) 139, 3537
SlaI CTCGAG 1 cut(s) 3566
SmaI CCCGGG 3 cut(s) 927, 945, 2542
SmiMI CAYNNNNRTG 5 cut(s) 1238, 1828, 2501, 2523, 2566
SmlI CTYRAG 2 cut(s) 3566, 3893
SmoI CTYRAG 2 cut(s) 3566, 3893
SnaBI TACGTA 2 cut(s) 2386, 2788
SpeI ACTAGT 1 cut(s) 1855
SrfI GCCCGGGC 1 cut(s) 927
SseBI AGGCCT 3 cut(s) 27, 1086, 1367
SsiI CCGC 9 cut(s) 212, 281, 822, 2133, 2537, 2579, 2999, 3643, 3957
SspI AATATT 4 cut(s) 2171, 3152, 3213, 3324
SstI GAGCTC 2 cut(s) 1077, 1358
StuI AGGCCT 3 cut(s) 27, 1086, 1367
StyI CCWWGG 3 cut(s) 2282, 2476, 3421
TaaI ACNGT 9 cut(s) 960, 1457, 1728, 1849, 2180, 2494, 2717, 3383, 4008
TaiI ACGT 9 cut(s) 1149, 1832, 1952, 2388, 2566, 2790, 2868, 2981, 3519
TatI WGTACW 5 cut(s) 1510, 1583, 2345, 2499, 3383
TauI GCSGC 1 cut(s) 825
TfiI GAWTC 4 cut(s) 72, 566, 2053, 3082
TseFI GTSAC 6 cut(s) 241, 1194, 1282, 3118, 3598, 3648
TseI GCWGC 2 cut(s) 5, 2515
Tsp45I GTSAC 6 cut(s) 241, 1194, 1282, 3118, 3598, 3648
TspDTI ATGAA 9 cut(s) 196, 816, 1473, 2053, 2085, 2257, 3547, 3680, 3870
TspGWI ACGGA 7 cut(s) 1351, 2173, 2180, 2210, 2219, 2310, 3385
TspMI CCCGGG 3 cut(s) 925, 943, 2540
VpaK11BI GGWCC 2 cut(s) 139, 3537
VspI ATTAAT 3 cut(s) 552, 860, 4100
XagI CCTNNNNNAGG 1 cut(s) 670
XceI RCATGY 3 cut(s) 1441, 2506, 3649
XcmI CCANNNNNNNNNTGG 1 cut(s) 1555
XhoI CTCGAG 1 cut(s) 3566
XmaI CCCGGG 3 cut(s) 925, 943, 2540
XmaJI CCTAGG 1 cut(s) 2282
XmiI GTMKAC 1 cut(s) 3417
ZraI GACGTC 1 cut(s) 1147
ZrmI AGTACT 1 cut(s) 1512
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.