No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g03360 pycom05g07610 pycom17g12390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 386, 470, 657 |
| AccBSI | CCGCTC | 1 cut(s) | 163 |
| AccI | GTMKAC | 1 cut(s) | 250 |
| AciI | CCGC | 2 cut(s) | 161, 179 |
| AclWI | GGATC | 2 cut(s) | 558, 637 |
| AcoI | YGGCCR | 2 cut(s) | 220, 584 |
| AcsI | RAATTY | 2 cut(s) | 80, 442 |
| AcvI | CACGTG | 1 cut(s) | 141 |
| AfaI | GTAC | 1 cut(s) | 122 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 264 |
| AflIII | ACRYGT | 2 cut(s) | 140, 723 |
| AgsI | TTSAA | 2 cut(s) | 542, 640 |
| AluBI | AGCT | 1 cut(s) | 231 |
| AluI | AGCT | 1 cut(s) | 231 |
| Alw26I | GTCTC | 1 cut(s) | 718 |
| AlwI | GGATC | 2 cut(s) | 558, 637 |
| AoxI | GGCC | 2 cut(s) | 220, 584 |
| ApoI | RAATTY | 2 cut(s) | 80, 442 |
| AsuC2I | CCSGG | 1 cut(s) | 259 |
| AsuHPI | GGTGA | 1 cut(s) | 197 |
| AsuII | TTCGAA | 1 cut(s) | 238 |
| BanII | GRGCYC | 1 cut(s) | 650 |
| BbrPI | CACGTG | 1 cut(s) | 141 |
| BccI | CCATC | 3 cut(s) | 541, 558, 620 |
| BcnI | CCSGG | 1 cut(s) | 259 |
| BcoDI | GTCTC | 1 cut(s) | 718 |
| BfaI | CTAG | 3 cut(s) | 212, 246, 561 |
| Bme1390I | CCNGG | 1 cut(s) | 259 |
| BmrFI | CCNGG | 1 cut(s) | 259 |
| BmsI | GCATC | 1 cut(s) | 190 |
| Bpu10I | CCTNAGC | 1 cut(s) | 515 |
| Bpu14I | TTCGAA | 1 cut(s) | 238 |
| BpuMI | CCSGG | 1 cut(s) | 259 |
| Bsa29I | ATCGAT | 1 cut(s) | 624 |
| BsaAI | YACGTR | 1 cut(s) | 141 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 264 |
| BseCI | ATCGAT | 1 cut(s) | 624 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 264 |
| BseMII | CTCAG | 1 cut(s) | 723 |
| BshFI | GGCC | 2 cut(s) | 222, 586 |
| BshVI | ATCGAT | 1 cut(s) | 624 |
| BsiSI | CCGG | 1 cut(s) | 258 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 264 |
| BsmAI | GTCTC | 1 cut(s) | 718 |
| BsnI | GGCC | 2 cut(s) | 222, 586 |
| Bsp119I | TTCGAA | 1 cut(s) | 238 |
| Bsp1286I | GDGCHC | 1 cut(s) | 650 |
| Bsp143I | GATC | 2 cut(s) | 550, 629 |
| BspACI | CCGC | 2 cut(s) | 161, 179 |
| BspANI | GGCC | 2 cut(s) | 222, 586 |
| BspCNI | CTCAG | 1 cut(s) | 722 |
| BspDI | ATCGAT | 1 cut(s) | 624 |
| BspPI | GGATC | 2 cut(s) | 558, 637 |
| BspT104I | TTCGAA | 1 cut(s) | 238 |
| BsrBI | CCGCTC | 1 cut(s) | 163 |
| BssMI | GATC | 2 cut(s) | 550, 629 |
| BstBAI | YACGTR | 1 cut(s) | 141 |
| BstBI | TTCGAA | 1 cut(s) | 238 |
| BstC8I | GCNNGC | 1 cut(s) | 362 |
| BstDEI | CTNAG | 2 cut(s) | 515, 709 |
| BstKTI | GATC | 2 cut(s) | 553, 632 |
| BstMAI | GTCTC | 1 cut(s) | 718 |
| BstMBI | GATC | 2 cut(s) | 550, 629 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 228 |
| BstNSI | RCATGY | 1 cut(s) | 727 |
| BstSCI | CCNGG | 1 cut(s) | 257 |
| BstX2I | RGATCY | 1 cut(s) | 550 |
| BstYI | RGATCY | 1 cut(s) | 550 |
| Bsu15I | ATCGAT | 1 cut(s) | 624 |
| BsuRI | GGCC | 2 cut(s) | 222, 586 |
| BsuTUI | ATCGAT | 1 cut(s) | 624 |
| Cac8I | GCNNGC | 1 cut(s) | 362 |
| ClaI | ATCGAT | 1 cut(s) | 624 |
| Csp6I | GTAC | 1 cut(s) | 121 |
| CviAII | CATG | 1 cut(s) | 724 |
| CviJI | RGCY | 9 cut(s) | 47, 199, 222, 231, 364, 452, 520, 586, 648 |
| CviKI_1 | RGCY | 9 cut(s) | 47, 199, 222, 231, 364, 452, 520, 586, 648 |
| CviQI | GTAC | 1 cut(s) | 121 |
| DdeI | CTNAG | 2 cut(s) | 515, 709 |
| DpnI | GATC | 2 cut(s) | 552, 631 |
| DpnII | GATC | 2 cut(s) | 550, 629 |
| DraI | TTTAAA | 2 cut(s) | 85, 441 |
| EaeI | YGGCCR | 2 cut(s) | 220, 584 |
| Eco24I | GRGCYC | 1 cut(s) | 650 |
| Eco72I | CACGTG | 1 cut(s) | 141 |
| EcoT38I | GRGCYC | 1 cut(s) | 650 |
| FaeI | CATG | 1 cut(s) | 727 |
| FatI | CATG | 1 cut(s) | 723 |
| FauI | CCCGC | 1 cut(s) | 168 |
| FblI | GTMKAC | 1 cut(s) | 250 |
| FriOI | GRGCYC | 1 cut(s) | 650 |
| FspBI | CTAG | 3 cut(s) | 212, 246, 561 |
| HaeIII | GGCC | 2 cut(s) | 222, 586 |
| HapII | CCGG | 1 cut(s) | 258 |
| Hin1II | CATG | 1 cut(s) | 727 |
| HincII | GTYRAC | 1 cut(s) | 493 |
| HindII | GTYRAC | 1 cut(s) | 493 |
| HinfI | GANTC | 1 cut(s) | 592 |
| HpaI | GTTAAC | 1 cut(s) | 493 |
| HpaII | CCGG | 1 cut(s) | 258 |
| HphI | GGTGA | 1 cut(s) | 197 |
| Hpy166II | GTNNAC | 3 cut(s) | 251, 270, 493 |
| Hpy188I | TCNGA | 2 cut(s) | 133, 696 |
| Hpy8I | GTNNAC | 3 cut(s) | 251, 270, 493 |
| HpyAV | CCTTC | 3 cut(s) | 218, 283, 715 |
| HpyCH4IV | ACGT | 1 cut(s) | 140 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 228 |
| HpyF3I | CTNAG | 2 cut(s) | 515, 709 |
| HpySE526I | ACGT | 1 cut(s) | 140 |
| Hsp92II | CATG | 1 cut(s) | 727 |
| KspAI | GTTAAC | 1 cut(s) | 493 |
| Kzo9I | GATC | 2 cut(s) | 550, 629 |
| LmnI | GCTCC | 1 cut(s) | 707 |
| LpnPI | CCDG | 4 cut(s) | 236, 271, 374, 481 |
| LweI | GCATC | 1 cut(s) | 190 |
| MaeI | CTAG | 3 cut(s) | 212, 246, 561 |
| MaeII | ACGT | 1 cut(s) | 140 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 2 cut(s) | 552, 631 |
| MbiI | CCGCTC | 1 cut(s) | 163 |
| MboI | GATC | 2 cut(s) | 550, 629 |
| MboII | GAAGA | 2 cut(s) | 335, 601 |
| MflI | RGATCY | 1 cut(s) | 550 |
| MhlI | GDGCHC | 1 cut(s) | 650 |
| MluCI | AATT | 7 cut(s) | 80, 234, 327, 387, 442, 509, 522 |
| MnlI | CCTC | 4 cut(s) | 297, 332, 379, 522 |
| MseI | TTAA | 7 cut(s) | 84, 399, 420, 440, 492, 555, 599 |
| MspI | CCGG | 1 cut(s) | 258 |
| MspR9I | CCNGG | 1 cut(s) | 259 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 228 |
| NciI | CCSGG | 1 cut(s) | 259 |
| NdeII | GATC | 2 cut(s) | 550, 629 |
| NlaIII | CATG | 1 cut(s) | 727 |
| NspI | RCATGY | 1 cut(s) | 727 |
| NspV | TTCGAA | 1 cut(s) | 238 |
| PciI | ACATGT | 1 cut(s) | 723 |
| PfeI | GAWTC | 1 cut(s) | 592 |
| PmaCI | CACGTG | 1 cut(s) | 141 |
| PmlI | CACGTG | 1 cut(s) | 141 |
| Ppu21I | YACGTR | 1 cut(s) | 141 |
| PscI | ACATGT | 1 cut(s) | 723 |
| PsiI | TTATAA | 3 cut(s) | 386, 470, 657 |
| PspCI | CACGTG | 1 cut(s) | 141 |
| PsuI | RGATCY | 1 cut(s) | 550 |
| RsaI | GTAC | 1 cut(s) | 122 |
| RsaNI | GTAC | 1 cut(s) | 121 |
| SaqAI | TTAA | 7 cut(s) | 84, 399, 420, 440, 492, 555, 599 |
| Sau3AI | GATC | 2 cut(s) | 550, 629 |
| ScrFI | CCNGG | 1 cut(s) | 259 |
| SduI | GDGCHC | 1 cut(s) | 650 |
| SfaNI | GCATC | 1 cut(s) | 190 |
| SfuI | TTCGAA | 1 cut(s) | 238 |
| Sse9I | AATT | 7 cut(s) | 80, 234, 327, 387, 442, 509, 522 |
| SsiI | CCGC | 2 cut(s) | 161, 179 |
| SspI | AATATT | 1 cut(s) | 313 |
| SspMI | CTAG | 3 cut(s) | 212, 246, 561 |
| StyD4I | CCNGG | 1 cut(s) | 257 |
| TaiI | ACGT | 1 cut(s) | 143 |
| TaqI | TCGA | 3 cut(s) | 105, 238, 624 |
| TasI | AATT | 7 cut(s) | 80, 234, 327, 387, 442, 509, 522 |
| TatI | WGTACW | 1 cut(s) | 120 |
| TfiI | GAWTC | 1 cut(s) | 592 |
| Tru1I | TTAA | 7 cut(s) | 84, 399, 420, 440, 492, 555, 599 |
| Tru9I | TTAA | 7 cut(s) | 84, 399, 420, 440, 492, 555, 599 |
| TspDTI | ATGAA | 3 cut(s) | 144, 191, 607 |
| XapI | RAATTY | 2 cut(s) | 80, 442 |
| XceI | RCATGY | 1 cut(s) | 727 |
| XmiI | GTMKAC | 1 cut(s) | 250 |
| XspI | CTAG | 3 cut(s) | 212, 246, 561 |