E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g29140 FvH4_7g29140 |
| pyrus_communis | pycom01g20840 |
| rosa_samantha | Rh1CG390000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 50, 129, 156, 159, 231 |
| AcuI | CTGAAG | 1 cut(s) | 283 |
| AfaI | GTAC | 1 cut(s) | 282 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 36, 219 |
| AhlI | ACTAGT | 1 cut(s) | 388 |
| AjnI | CCWGG | 1 cut(s) | 218 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| Alw21I | GWGCWC | 2 cut(s) | 23, 418 |
| Alw26I | GTCTC | 1 cut(s) | 51 |
| AoxI | GGCC | 3 cut(s) | 75, 130, 166 |
| ApeKI | GCWGC | 2 cut(s) | 190, 356 |
| AsuHPI | GGTGA | 1 cut(s) | 470 |
| Bbv12I | GWGCWC | 2 cut(s) | 23, 418 |
| BbvI | GCAGC | 2 cut(s) | 177, 343 |
| BceAI | ACGGC | 3 cut(s) | 53, 76, 458 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 29 |
| BciT130I | CCWGG | 1 cut(s) | 220 |
| BcoDI | GTCTC | 1 cut(s) | 51 |
| BcuI | ACTAGT | 1 cut(s) | 388 |
| BfaI | CTAG | 1 cut(s) | 389 |
| BisI | GCNGC | 6 cut(s) | 51, 130, 156, 159, 191, 357 |
| BlsI | GCNGC | 6 cut(s) | 52, 131, 157, 160, 192, 358 |
| Bme1390I | CCNGG | 1 cut(s) | 220 |
| BmrFI | CCNGG | 1 cut(s) | 220 |
| BmrI | ACTGGG | 1 cut(s) | 280 |
| BmsI | GCATC | 4 cut(s) | 72, 199, 237, 293 |
| BmuI | ACTGGG | 1 cut(s) | 280 |
| BpmI | CTGGAG | 1 cut(s) | 215 |
| BsaBI | GATNNNNATC | 1 cut(s) | 96 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 36, 219 |
| Bse1I | ACTGG | 2 cut(s) | 275, 337 |
| Bse3DI | GCAATG | 1 cut(s) | 313 |
| Bse8I | GATNNNNATC | 1 cut(s) | 96 |
| BseBI | CCWGG | 1 cut(s) | 220 |
| BseJI | GATNNNNATC | 1 cut(s) | 96 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 36, 219 |
| BseMI | GCAATG | 1 cut(s) | 313 |
| BseMII | CTCAG | 1 cut(s) | 452 |
| BseNI | ACTGG | 2 cut(s) | 275, 337 |
| BseXI | GCAGC | 2 cut(s) | 177, 343 |
| BshFI | GGCC | 3 cut(s) | 77, 132, 168 |
| BsiHKAI | GWGCWC | 2 cut(s) | 23, 418 |
| BsiSI | CCGG | 1 cut(s) | 30 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 36, 219 |
| BsmAI | GTCTC | 1 cut(s) | 51 |
| BsmBI | CGTCTC | 1 cut(s) | 51 |
| BsnI | GGCC | 3 cut(s) | 77, 132, 168 |
| Bsp1286I | GDGCHC | 2 cut(s) | 23, 418 |
| Bsp1407I | TGTACA | 1 cut(s) | 280 |
| BspACI | CCGC | 5 cut(s) | 50, 129, 156, 159, 231 |
| BspANI | GGCC | 3 cut(s) | 77, 132, 168 |
| BspCNI | CTCAG | 1 cut(s) | 451 |
| BspQI | GCTCTTC | 2 cut(s) | 302, 351 |
| BsrDI | GCAATG | 1 cut(s) | 313 |
| BsrGI | TGTACA | 1 cut(s) | 280 |
| BsrI | ACTGG | 2 cut(s) | 275, 337 |
| Bst2UI | CCWGG | 1 cut(s) | 220 |
| Bst6I | CTCTTC | 2 cut(s) | 302, 351 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 102 |
| BstAUI | TGTACA | 1 cut(s) | 280 |
| BstC8I | GCNNGC | 3 cut(s) | 233, 252, 256 |
| BstDEI | CTNAG | 1 cut(s) | 438 |
| BstMAI | GTCTC | 1 cut(s) | 51 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 102 |
| BstNI | CCWGG | 1 cut(s) | 220 |
| BstNSI | RCATGY | 2 cut(s) | 258, 374 |
| BstSCI | CCNGG | 1 cut(s) | 218 |
| BstV1I | GCAGC | 2 cut(s) | 177, 343 |
| BsuRI | GGCC | 3 cut(s) | 77, 132, 168 |
| BtgZI | GCGATG | 1 cut(s) | 78 |
| BtsIMutI | CAGTG | 1 cut(s) | 268 |
| Cac8I | GCNNGC | 3 cut(s) | 233, 252, 256 |
| Csp6I | GTAC | 1 cut(s) | 281 |
| CviAII | CATG | 3 cut(s) | 255, 292, 371 |
| CviJI | RGCY | 6 cut(s) | 40, 77, 132, 168, 206, 398 |
| CviKI_1 | RGCY | 6 cut(s) | 40, 77, 132, 168, 206, 398 |
| CviQI | GTAC | 1 cut(s) | 281 |
| DdeI | CTNAG | 1 cut(s) | 438 |
| Eam1104I | CTCTTC | 2 cut(s) | 302, 351 |
| EarI | CTCTTC | 2 cut(s) | 302, 351 |
| Eco57I | CTGAAG | 1 cut(s) | 283 |
| EcoRII | CCWGG | 1 cut(s) | 218 |
| Esp3I | CGTCTC | 1 cut(s) | 51 |
| FaeI | CATG | 3 cut(s) | 258, 295, 374 |
| FaiI | YATR | 6 cut(s) | 256, 264, 293, 372, 383, 423 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 71, 103, 403, 435 |
| FatI | CATG | 3 cut(s) | 254, 291, 370 |
| FauI | CCCGC | 1 cut(s) | 224 |
| Fnu4HI | GCNGC | 6 cut(s) | 51, 130, 156, 159, 191, 357 |
| Fsp4HI | GCNGC | 6 cut(s) | 51, 130, 156, 159, 191, 357 |
| FspBI | CTAG | 1 cut(s) | 389 |
| GluI | GCNGC | 6 cut(s) | 51, 130, 156, 159, 191, 357 |
| GsuI | CTGGAG | 1 cut(s) | 215 |
| HaeIII | GGCC | 3 cut(s) | 77, 132, 168 |
| HapII | CCGG | 1 cut(s) | 30 |
| Hin1II | CATG | 3 cut(s) | 258, 295, 374 |
| HinfI | GANTC | 1 cut(s) | 425 |
| HpaII | CCGG | 1 cut(s) | 30 |
| HphI | GGTGA | 1 cut(s) | 470 |
| Hpy166II | GTNNAC | 1 cut(s) | 478 |
| Hpy188I | TCNGA | 3 cut(s) | 302, 432, 441 |
| Hpy8I | GTNNAC | 1 cut(s) | 478 |
| HpyAV | CCTTC | 1 cut(s) | 133 |
| HpyCH4V | TGCA | 5 cut(s) | 96, 250, 306, 314, 467 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 102 |
| HpyF3I | CTNAG | 1 cut(s) | 438 |
| Hsp92II | CATG | 3 cut(s) | 258, 295, 374 |
| LguI | GCTCTTC | 2 cut(s) | 302, 351 |
| LmnI | GCTCC | 2 cut(s) | 203, 421 |
| LpnPI | CCDG | 8 cut(s) | 26, 43, 179, 205, 232, 256, 318, 322 |
| Lsp1109I | GCAGC | 2 cut(s) | 177, 343 |
| LweI | GCATC | 4 cut(s) | 72, 199, 237, 293 |
| MaeI | CTAG | 1 cut(s) | 389 |
| MboII | GAAGA | 2 cut(s) | 289, 338 |
| MhlI | GDGCHC | 2 cut(s) | 23, 418 |
| MluCI | AATT | 3 cut(s) | 7, 214, 223 |
| MnlI | CCTC | 6 cut(s) | 37, 67, 143, 153, 299, 449 |
| MslI | CAYNNNNRTG | 1 cut(s) | 16 |
| MspI | CCGG | 1 cut(s) | 30 |
| MspR9I | CCNGG | 1 cut(s) | 220 |
| MvaI | CCWGG | 1 cut(s) | 220 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 102 |
| NlaIII | CATG | 3 cut(s) | 258, 295, 374 |
| NspI | RCATGY | 2 cut(s) | 258, 374 |
| PaeI | GCATGC | 1 cut(s) | 258 |
| PciSI | GCTCTTC | 2 cut(s) | 302, 351 |
| PfeI | GAWTC | 1 cut(s) | 425 |
| PfoI | TCCNGGA | 1 cut(s) | 218 |
| PkrI | GCNGC | 6 cut(s) | 52, 131, 157, 160, 192, 358 |
| Psp6I | CCWGG | 1 cut(s) | 218 |
| PspGI | CCWGG | 1 cut(s) | 218 |
| RsaI | GTAC | 1 cut(s) | 282 |
| RsaNI | GTAC | 1 cut(s) | 281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 16 |
| SapI | GCTCTTC | 2 cut(s) | 302, 351 |
| SatI | GCNGC | 6 cut(s) | 51, 130, 156, 159, 191, 357 |
| ScrFI | CCNGG | 1 cut(s) | 220 |
| SduI | GDGCHC | 2 cut(s) | 23, 418 |
| SetI | ASST | 4 cut(s) | 125, 208, 460, 497 |
| SfaNI | GCATC | 4 cut(s) | 72, 199, 237, 293 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 16 |
| SpeI | ACTAGT | 1 cut(s) | 388 |
| SphI | GCATGC | 1 cut(s) | 258 |
| Sse9I | AATT | 3 cut(s) | 7, 214, 223 |
| SsiI | CCGC | 5 cut(s) | 50, 129, 156, 159, 231 |
| SspMI | CTAG | 1 cut(s) | 389 |
| StyD4I | CCNGG | 1 cut(s) | 218 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TasI | AATT | 3 cut(s) | 7, 214, 223 |
| TatI | WGTACW | 1 cut(s) | 280 |
| TauI | GCSGC | 4 cut(s) | 53, 132, 158, 161 |
| TfiI | GAWTC | 1 cut(s) | 425 |
| TscAI | CASTG | 1 cut(s) | 275 |
| TseI | GCWGC | 2 cut(s) | 190, 356 |
| TspDTI | ATGAA | 2 cut(s) | 338, 438 |
| TspRI | CASTG | 1 cut(s) | 275 |
| XceI | RCATGY | 2 cut(s) | 258, 374 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 85 |
| XspI | CTAG | 1 cut(s) | 389 |