pycom01g22810

Belongs to the glycosyltransferase 1 family. Bacterial plant glycogen synthase subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
20284469 .. 20287529
3061 bp
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UTR
Exon/CDS
Intron
pycom01g22810.11

Sequence Viewer

Length: 1425 bp
ATGGTTGTCTCTCCTAGATATCAAAATGGTACTGCTGCAGACCAGAAATATTCTGGTGCTGTTGATTTGGAAACCCGCGTCAAGGTTTATTGCTTTGGTGGAGAGCAAGAAGTTTCTTTCTACCATGAATATAGGGCAGGTGTGGATTGGGTATTCGTGGACCATCCGTCTTATCACAGACCTGGAAGTCCATATGGTGATAGTTTGGGTGCATTTGATGACAATCAGTTTCGGTTCACTTTACTTTGCCATGCAGCGTGTGAAGCACCATTAGTGCTTCCATTGGGAGGGTTCACCTATGGGGAGAAAAGCCTGTTCATGGTCAATGACTGGCATGCTGGCCTTGTGCCATTGCTTTTGGCTGCCAAGTATCGTCCATATGGAGTTTATAAGGATGCACGAAGTATTCTTGTAATTCATAACCTTGCACATCAGGGAGTGGAACCAGGAGTAACATACAAGAATTTGGGGCTACCTGCAGAGTGGTACGGAGCACTGGAATGGGTGTTTCCAACATGGGCAAGGGCCCACGCCCTTGACAAAGGTGAAGCAGTGAACATCCTGAAGGGTGCAATTGTGACATCTGATCGGATTCTGACAGTAAGCAAGGGCTACTCCTGGGAAATAACAACCGTTGAAGGTGGATATGGTCTAAATGAGCTACTAAGCAGTAGAAAGAGTGTTATTACTGGAATCACCAATGGGGTCGATGTGGTTGAATGGAACCCATCTACTGATGTACACACTGCTTCCCACTATTCTGCTGATGATCTTTCCGGAAAGGTTCAGTGCAAGCTTGCTTTGCAGAAGGAGTTAGGTCTTCCCCTTAGGCCGGATTGCCCATTGATTGGATTCGTTGGACGACTGGACTACCAGAAAGGTATTGACCTGATTCAGTCAGGAATGCCACTACTTATGGAAGATGACGTGCAATTTGTTATGCTGGGATCTGGGGACCCAGTGTGTGAAGATTGGATGAGAGCAGCAGAAGCAACTTACAAAGATAAATTCCGGGGTTGGGTTGGATTTAATGTTCCAGTTTCCCATAGAATAACCGCAGGCTGTGACATACTCTTGATGCCGTCAAGGTTCGAGCCTTGTGGACTAAATCAATTGTATGCAATGAGATACGGAACTGTACCAGTGGTTCATAGCACAGGAGGACTGAGAGATACAGTAGTGAATTTCAATCCATATGCTCAAGGAGGCAAGGGTGACGGGACAGGGTGGACCTTTTCTCCATTAACAAAAGAGAGTATGTTGGCGGCACTAAAACTTGCTTGTAGGACTTTCAGAGAGTACAAGCCTTCCTGGGAGGGATTGATGAAGAGAGGCATGGAGAGAGACTTCACATGGGAAAGTGCCGCAATCAAGTACGAGCAGGTCTTCGGATGGGCCTTTATCGATCCACCCTACGTCAAGTAA

Protein Analysis

475

Amino Acids

52.68

Weight (kDa)

5.87

Isoelectric Point (pI)

27.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 390
AarI CACCTGC 1 cut(s) 128
AasI GACNNNNNNGTC 1 cut(s) 186
Acc36I ACCTGC 3 cut(s) 128, 484, 1372
AccB7I CCANNNNNTGG 1 cut(s) 848
AccII CGCG 1 cut(s) 78
AccIII TCCGGA 1 cut(s) 776
AciI CCGC 4 cut(s) 76, 1056, 1265, 1365
AclWI GGATC 2 cut(s) 955, 1400
AcsI RAATTY 3 cut(s) 463, 1007, 1183
AcuI CTGAAG 1 cut(s) 584
AfaI GTAC 6 cut(s) 31, 488, 741, 1140, 1301, 1376
AfiI CCNNNNNNNGG 6 cut(s) 82, 287, 319, 832, 848, 1018
AgsI TTSAA 3 cut(s) 638, 719, 1189
AhdI GACNNNNNGTC 1 cut(s) 166
AjiI CACGTC 1 cut(s) 928
AjnI CCWGG 4 cut(s) 181, 445, 617, 1310
AloI GAACNNNNNNTCC 2 cut(s) 1017, 1049
AluBI AGCT 2 cut(s) 661, 796
AluI AGCT 2 cut(s) 661, 796
Alw21I GWGCWC 1 cut(s) 496
Alw26I GTCTC 2 cut(s) 13, 1338
AlwI GGATC 2 cut(s) 955, 1400
Aor13HI TCCGGA 1 cut(s) 776
AoxI GGCC 4 cut(s) 340, 525, 830, 1395
ApaI GGGCCC 1 cut(s) 529
ApeKI GCWGC 4 cut(s) 35, 254, 362, 983
ApoI RAATTY 3 cut(s) 463, 1007, 1183
ArsI GACNNNNNNTTYG 2 cut(s) 917, 949
AspS9I GGNCC 6 cut(s) 160, 525, 526, 955, 1230, 1395
AsuC2I CCSGG 1 cut(s) 1013
AsuHPI GGTGA 5 cut(s) 209, 286, 557, 688, 1226
AvaII GGWCC 3 cut(s) 160, 955, 1230
AxyI CCTNAGG 1 cut(s) 827
BaeGI GKGCMC 1 cut(s) 529
BaeI ACNNNNGTAYC 2 cut(s) 1164, 1197
BanII GRGCYC 1 cut(s) 529
BbsI GAAGAC 2 cut(s) 812, 1378
Bbv12I GWGCWC 1 cut(s) 496
BbvI GCAGC 4 cut(s) 22, 266, 349, 995
BccI CCATC 3 cut(s) 171, 736, 1386
BceAI ACGGC 1 cut(s) 1066
BciT130I CCWGG 4 cut(s) 183, 447, 619, 1312
BcnI CCSGG 1 cut(s) 1013
BcoDI GTCTC 2 cut(s) 13, 1338
BfaI CTAG 1 cut(s) 15
BfmI CTRYAG 2 cut(s) 36, 477
BfuAI ACCTGC 3 cut(s) 128, 484, 1372
BisI GCNGC 6 cut(s) 36, 255, 363, 984, 1266, 1365
BlsI GCNGC 6 cut(s) 37, 256, 364, 985, 1267, 1366
Bme1390I CCNGG 5 cut(s) 183, 447, 619, 1013, 1312
Bme18I GGWCC 3 cut(s) 160, 955, 1230
BmeRI GACNNNNNGTC 1 cut(s) 166
BmgBI CACGTC 1 cut(s) 928
BmgT120I GGNCC 6 cut(s) 160, 525, 526, 955, 1230, 1395
BmiI GGNNCC 5 cut(s) 444, 527, 725, 956, 957
BmrFI CCNGG 5 cut(s) 183, 447, 619, 1013, 1312
BmrI ACTGGG 1 cut(s) 953
BmsI GCATC 2 cut(s) 385, 1068
BmuI ACTGGG 1 cut(s) 953
BpiI GAAGAC 2 cut(s) 812, 1378
BpuEI CTTGAG 1 cut(s) 1185
BpuMI CCSGG 1 cut(s) 1013
Bsa29I ATCGAT 1 cut(s) 1404
BsaBI GATNNNNATC 1 cut(s) 222
BsaJI CCNNGG 3 cut(s) 618, 1012, 1311
BsaWI WCCGGW 1 cut(s) 776
BsaXI ACNNNNNCTCC 2 cut(s) 1222, 1252
Bsc4I CCNNNNNNNGG 6 cut(s) 82, 287, 319, 832, 848, 1018
Bse1I ACTGG 7 cut(s) 335, 501, 694, 870, 959, 1037, 1142
Bse21I CCTNAGG 1 cut(s) 827
Bse3DI GCAATG 2 cut(s) 350, 1128
Bse8I GATNNNNATC 1 cut(s) 222
BseAI TCCGGA 1 cut(s) 776
BseBI CCWGG 4 cut(s) 183, 447, 619, 1312
BseCI ATCGAT 1 cut(s) 1404
BseDI CCNNGG 3 cut(s) 618, 1012, 1311
BseGI GGATG 5 cut(s) 163, 400, 558, 981, 1397
BseJI GATNNNNATC 1 cut(s) 222
BseLI CCNNNNNNNGG 6 cut(s) 82, 287, 319, 832, 848, 1018
BseMI GCAATG 2 cut(s) 350, 1128
BseMII CTCAG 1 cut(s) 1157
BseNI ACTGG 7 cut(s) 335, 501, 694, 870, 959, 1037, 1142
BseSI GKGCMC 1 cut(s) 529
BseXI GCAGC 4 cut(s) 22, 266, 349, 995
BseYI CCCAGC 1 cut(s) 943
Bsh1236I CGCG 1 cut(s) 78
BshFI GGCC 4 cut(s) 342, 527, 832, 1397
BshVI ATCGAT 1 cut(s) 1404
BsiHKAI GWGCWC 1 cut(s) 496
BsiSI CCGG 3 cut(s) 777, 833, 1012
BslFI GGGAC 2 cut(s) 968, 1234
BslI CCNNNNNNNGG 6 cut(s) 82, 287, 319, 832, 848, 1018
BsmAI GTCTC 2 cut(s) 13, 1338
BsmFI GGGAC 2 cut(s) 968, 1234
BsmI GAATGC 1 cut(s) 909
BsnI GGCC 4 cut(s) 342, 527, 832, 1397
Bsp120I GGGCCC 1 cut(s) 525
Bsp1286I GDGCHC 2 cut(s) 496, 529
Bsp13I TCCGGA 1 cut(s) 776
Bsp1407I TGTACA 1 cut(s) 739
Bsp143I GATC 4 cut(s) 586, 769, 947, 1405
BspACI CCGC 4 cut(s) 76, 1056, 1265, 1365
BspANI GGCC 4 cut(s) 342, 527, 832, 1397
BspCNI CTCAG 1 cut(s) 1158
BspDI ATCGAT 1 cut(s) 1404
BspEI TCCGGA 1 cut(s) 776
BspFNI CGCG 1 cut(s) 78
BspLI GGNNCC 5 cut(s) 444, 527, 725, 956, 957
BspMAI CTGCAG 2 cut(s) 40, 481
BspMI ACCTGC 3 cut(s) 128, 484, 1372
BspPI GGATC 2 cut(s) 955, 1400
BsrDI GCAATG 2 cut(s) 350, 1128
BsrGI TGTACA 1 cut(s) 739
BsrI ACTGG 7 cut(s) 335, 501, 694, 870, 959, 1037, 1142
BssECI CCNNGG 3 cut(s) 618, 1012, 1311
BssMI GATC 4 cut(s) 586, 769, 947, 1405
Bst2UI CCWGG 4 cut(s) 183, 447, 619, 1312
Bst4CI ACNGT 4 cut(s) 601, 634, 1138, 1177
Bst6I CTCTTC 1 cut(s) 1322
BstAUI TGTACA 1 cut(s) 739
BstC8I GCNNGC 5 cut(s) 336, 340, 794, 798, 1060
BstDEI CTNAG 3 cut(s) 665, 827, 1166
BstF5I GGATG 5 cut(s) 163, 400, 558, 981, 1397
BstFNI CGCG 1 cut(s) 78
BstKTI GATC 4 cut(s) 589, 772, 950, 1408
BstMAI GTCTC 2 cut(s) 13, 1338
BstMBI GATC 4 cut(s) 586, 769, 947, 1405
BstMWI GCNNNNNNNGC 3 cut(s) 263, 802, 989
BstNI CCWGG 4 cut(s) 183, 447, 619, 1312
BstNSI RCATGY 1 cut(s) 338
BstSCI CCNGG 5 cut(s) 181, 445, 617, 1011, 1310
BstSFI CTRYAG 2 cut(s) 36, 477
BstSLI GKGCMC 1 cut(s) 529
BstUI CGCG 1 cut(s) 78
BstV1I GCAGC 4 cut(s) 22, 266, 349, 995
BstV2I GAAGAC 2 cut(s) 812, 1378
BstX2I RGATCY 1 cut(s) 947
BstYI RGATCY 1 cut(s) 947
Bsu15I ATCGAT 1 cut(s) 1404
Bsu36I CCTNAGG 1 cut(s) 827
BsuRI GGCC 4 cut(s) 342, 527, 832, 1397
BsuTUI ATCGAT 1 cut(s) 1404
BtrI CACGTC 1 cut(s) 928
BtsCI GGATG 5 cut(s) 163, 400, 558, 981, 1397
BtsI GCAGTG 2 cut(s) 558, 744
BtsIMutI CAGTG 6 cut(s) 494, 558, 744, 794, 966, 1149
BveI ACCTGC 3 cut(s) 128, 484, 1372
Cac8I GCNNGC 5 cut(s) 336, 340, 794, 798, 1060
Cfr13I GGNCC 6 cut(s) 160, 525, 526, 955, 1230, 1395
ClaI ATCGAT 1 cut(s) 1404
CseI GACGC 1 cut(s) 67
Csp6I GTAC 6 cut(s) 30, 487, 740, 1139, 1300, 1375
CviAII CATG 7 cut(s) 125, 251, 319, 335, 516, 1336, 1353
CviQI GTAC 6 cut(s) 30, 487, 740, 1139, 1300, 1375
DdeI CTNAG 3 cut(s) 665, 827, 1166
DpnI GATC 4 cut(s) 588, 771, 949, 1407
DpnII GATC 4 cut(s) 586, 769, 947, 1405
DrdI GACNNNNNNGTC 1 cut(s) 186
DriI GACNNNNNGTC 1 cut(s) 166
DseDI GACNNNNNNGTC 1 cut(s) 186
Eam1104I CTCTTC 1 cut(s) 1322
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 1 cut(s) 1322
Eco24I GRGCYC 1 cut(s) 529
Eco32I GATATC 1 cut(s) 20
Eco47I GGWCC 3 cut(s) 160, 955, 1230
Eco57I CTGAAG 1 cut(s) 584
Eco81I CCTNAGG 1 cut(s) 827
EcoO109I RGGNCCY 2 cut(s) 525, 955
EcoRII CCWGG 4 cut(s) 181, 445, 617, 1310
EcoRV GATATC 1 cut(s) 20
EcoT38I GRGCYC 1 cut(s) 529
FaeI CATG 7 cut(s) 128, 254, 322, 338, 519, 1339, 1356
FaqI GGGAC 2 cut(s) 968, 1234
FatI CATG 7 cut(s) 124, 250, 318, 334, 515, 1335, 1352
FauI CCCGC 1 cut(s) 83
FauNDI CATATG 3 cut(s) 193, 379, 1195
Fnu4HI GCNGC 6 cut(s) 36, 255, 363, 984, 1266, 1365
FokI GGATG 5 cut(s) 150, 407, 545, 988, 1404
FriOI GRGCYC 1 cut(s) 529
Fsp4HI GCNGC 6 cut(s) 36, 255, 363, 984, 1266, 1365
FspBI CTAG 1 cut(s) 15
GluI GCNGC 6 cut(s) 36, 255, 363, 984, 1266, 1365
GsaI CCCAGC 1 cut(s) 947
HaeIII GGCC 4 cut(s) 342, 527, 832, 1397
HapII CCGG 3 cut(s) 777, 833, 1012
HgaI GACGC 1 cut(s) 67
Hin1II CATG 7 cut(s) 128, 254, 322, 338, 519, 1339, 1356
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 4 cut(s) 592, 693, 852, 892
HpaII CCGG 3 cut(s) 777, 833, 1012
HphI GGTGA 5 cut(s) 209, 286, 557, 688, 1226
Hpy166II GTNNAC 7 cut(s) 160, 237, 294, 556, 742, 1103, 1230
Hpy188I TCNGA 5 cut(s) 586, 591, 597, 1295, 1391
Hpy188III TCNNGA 4 cut(s) 562, 777, 900, 1075
Hpy8I GTNNAC 7 cut(s) 160, 237, 294, 556, 742, 1103, 1230
HpyAV CCTTC 4 cut(s) 559, 632, 802, 1317
HpyCH4III ACNGT 4 cut(s) 601, 634, 1138, 1177
HpyCH4IV ACGT 2 cut(s) 927, 1416
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 802, 989
HpyF3I CTNAG 3 cut(s) 665, 827, 1166
HpySE526I ACGT 2 cut(s) 927, 1416
Hsp92II CATG 7 cut(s) 128, 254, 322, 338, 519, 1339, 1356
KflI GGGWCCC 1 cut(s) 955
Kpn2I TCCGGA 1 cut(s) 776
Kzo9I GATC 4 cut(s) 586, 769, 947, 1405
LmnI GCTCC 1 cut(s) 491
Lsp1109I GCAGC 4 cut(s) 22, 266, 349, 995
LweI GCATC 2 cut(s) 385, 1068
MaeI CTAG 1 cut(s) 15
MaeII ACGT 2 cut(s) 927, 1416
MaeIII GTNAC 4 cut(s) 451, 577, 1064, 1214
MalI GATC 4 cut(s) 588, 771, 949, 1407
MboI GATC 4 cut(s) 586, 769, 947, 1405
MboII GAAGA 5 cut(s) 812, 932, 980, 1339, 1378
MfeI CAATTG 2 cut(s) 573, 1112
MflI RGATCY 1 cut(s) 947
MhlI GDGCHC 2 cut(s) 496, 529
MluCI AATT 7 cut(s) 414, 463, 573, 932, 1007, 1112, 1183
MmeI TCCRAC 3 cut(s) 536, 838, 1003
MnlI CCTC 5 cut(s) 281, 1154, 1199, 1309, 1325
MroI TCCGGA 1 cut(s) 776
MseI TTAA 2 cut(s) 1029, 1244
MslI CAYNNNNRTG 1 cut(s) 499
MspI CCGG 3 cut(s) 777, 833, 1012
MspR9I CCNGG 5 cut(s) 183, 447, 619, 1013, 1312
MunI CAATTG 2 cut(s) 573, 1112
Mva1269I GAATGC 1 cut(s) 909
MvaI CCWGG 4 cut(s) 183, 447, 619, 1312
MvnI CGCG 1 cut(s) 78
MwoI GCNNNNNNNGC 3 cut(s) 263, 802, 989
NciI CCSGG 1 cut(s) 1013
NdeI CATATG 3 cut(s) 193, 379, 1195
NdeII GATC 4 cut(s) 586, 769, 947, 1405
NlaIII CATG 7 cut(s) 128, 254, 322, 338, 519, 1339, 1356
NlaIV GGNNCC 5 cut(s) 444, 527, 725, 956, 957
NmuCI GTSAC 3 cut(s) 577, 1064, 1214
NspI RCATGY 1 cut(s) 338
PaeI GCATGC 1 cut(s) 338
PaqCI CACCTGC 1 cut(s) 128
PctI GAATGC 1 cut(s) 909
PfeI GAWTC 4 cut(s) 592, 693, 852, 892
PflMI CCANNNNNTGG 1 cut(s) 848
PkrI GCNGC 6 cut(s) 37, 256, 364, 985, 1267, 1366
PpuMI RGGWCCY 1 cut(s) 955
PsiI TTATAA 1 cut(s) 390
Psp5II RGGWCCY 1 cut(s) 955
Psp6I CCWGG 4 cut(s) 181, 445, 617, 1310
PspFI CCCAGC 1 cut(s) 943
PspGI CCWGG 4 cut(s) 181, 445, 617, 1310
PspN4I GGNNCC 5 cut(s) 444, 527, 725, 956, 957
PspOMI GGGCCC 1 cut(s) 525
PspPI GGNCC 6 cut(s) 160, 525, 526, 955, 1230, 1395
PspPPI RGGWCCY 1 cut(s) 955
PsrI GAACNNNNNNTAC 2 cut(s) 1131, 1163
PstI CTGCAG 2 cut(s) 40, 481
PsuI RGATCY 1 cut(s) 947
RsaI GTAC 6 cut(s) 31, 488, 741, 1140, 1301, 1376
RsaNI GTAC 6 cut(s) 30, 487, 740, 1139, 1300, 1375
RseI CAYNNNNRTG 1 cut(s) 499
SaqAI TTAA 2 cut(s) 1029, 1244
SatI GCNGC 6 cut(s) 36, 255, 363, 984, 1266, 1365
Sau3AI GATC 4 cut(s) 586, 769, 947, 1405
Sau96I GGNCC 6 cut(s) 160, 525, 526, 955, 1230, 1395
ScrFI CCNGG 5 cut(s) 183, 447, 619, 1013, 1312
SduI GDGCHC 2 cut(s) 496, 529
SfaNI GCATC 2 cut(s) 385, 1068
SfcI CTRYAG 2 cut(s) 36, 477
SinI GGWCC 3 cut(s) 160, 955, 1230
SmiMI CAYNNNNRTG 1 cut(s) 499
SmlI CTYRAG 1 cut(s) 1200
SmoI CTYRAG 1 cut(s) 1200
SphI GCATGC 1 cut(s) 338
Sse9I AATT 7 cut(s) 414, 463, 573, 932, 1007, 1112, 1183
SsiI CCGC 4 cut(s) 76, 1056, 1265, 1365
SspI AATATT 1 cut(s) 50
SspMI CTAG 1 cut(s) 15
StyD4I CCNGG 5 cut(s) 181, 445, 617, 1011, 1310
TaaI ACNGT 4 cut(s) 601, 634, 1138, 1177
TaiI ACGT 2 cut(s) 930, 1419
TaqI TCGA 3 cut(s) 708, 1092, 1404
TasI AATT 7 cut(s) 414, 463, 573, 932, 1007, 1112, 1183
TatI WGTACW 2 cut(s) 739, 1299
TauI GCSGC 2 cut(s) 1268, 1367
TfiI GAWTC 4 cut(s) 592, 693, 852, 892
Tru1I TTAA 2 cut(s) 1029, 1244
Tru9I TTAA 2 cut(s) 1029, 1244
TscAI CASTG 6 cut(s) 501, 558, 751, 794, 966, 1149
TseFI GTSAC 3 cut(s) 577, 1064, 1214
TseI GCWGC 4 cut(s) 35, 254, 362, 983
Tsp45I GTSAC 3 cut(s) 577, 1064, 1214
TspDTI ATGAA 5 cut(s) 141, 307, 407, 1139, 1340
TspGWI ACGGA 3 cut(s) 156, 504, 1146
TspRI CASTG 6 cut(s) 501, 558, 751, 794, 966, 1149
Van91I CCANNNNNTGG 1 cut(s) 848
VpaK11BI GGWCC 3 cut(s) 160, 955, 1230
XapI RAATTY 3 cut(s) 463, 1007, 1183
XceI RCATGY 1 cut(s) 338
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
XspI CTAG 1 cut(s) 15
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.