pycom02g14280
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0029218
Physical Location & Seq
Forward (+)
10886295 .. 10888559
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g14280.6

Sequence Viewer

Length: 1068 bp
ATGGTTCTTCAAAGAAAGACAGAAGAGGCAGCAACTTCTACCAAGCGGCTTAAGGAATTGTTGGAAACTCGCAAATCTTCTGTACGTGACAACTCAGTTAACCCCAATGGACATACACCAACTAGCCAGGGCAATGAAGGATCTTTACAACGGTGGCTTGATCATGAGCTGGAAGTCATAGTGCAAGTGTATGAAGTTCGTTTGGAATATGAGAAGCAAAAGAAATTACGAGCTGCACTGGAAAAAGAGTTGGCCTTATTCAAGCAAGCAGATCAGCTTTCTGGTACTCAAAGAGGAAAGAGCGGGCATTCCAGAGTGCTGTCCATGTCACTGGGTGCAAGAATGGGAAGAATAGCTTCACTTGAGAACATGCTGAGCATGTCTTCAAATGCTCTCGTGGTGATGGCTTCACAGCTGTCAGAGGCAGAAGAAAGGGAGCAGAGCTTAAGCGGTCGTGGACGTTGGAATCAGTTGCGTACAATGGGCGACGCTAAGAACTTGCTTCAACATATATTTAATGGTGCTGCAGAAGCAAGCTGCCAGTTGTGGGAGAAGAACATGGAAATTAAGGACATGCAAGACCAGCTGAATGAGCTTGTCACTCTACTTCGTAAAAGTGAGGTTCAGAGAATGGAGCTGGTGAAGGAACAAAAAGTGATGGAAGAAGCTGTTGCTGTTGCGTTGAGTACACCAGCTTCGGCGAATTCACGCACTCCATTAAAGCACTTAATGGATGATATTAGTGGTCCCTTGTCTCCAAAGTCACTCCCAGCACCCAAGCAGCTCAAGTTCACAACTGGAATAGTTGATGGGTTGGTTCAAGATTCGGCGGCATTTCTGGACGAGACACAAAAGATGGTACCAATGGGACAATTCTCTATGAAGAAACTAGCAACGGTGGGGCATGGCGGTAAGCTTTGGAGGTGGAAGAGAAGTCATCATCAGTGGCTACTACAGTTTAAATGGAAGTGGCAGAAGCCTTGGAGACTCTCAGAATGGATCAAGCATAGCGATGAGACAATAATTAGGCCGAGGCCTCGCCCACAAACTCAGATAGATATGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000022 GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000819 GO:0000910 GO:0002376 GO:0002478 GO:0002495 GO:0002504 GO:0003674 GO:0003676 GO:0003677 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005819 GO:0005829 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005876 GO:0006355 GO:0006810 GO:0006890 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0007059 GO:0008088 GO:0008089 GO:0008150 GO:0008574 GO:0009664 GO:0009832 GO:0009889 GO:0009891 GO:0009893 GO:0009937 GO:0009966 GO:0009987 GO:0010215 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010970 GO:0015630 GO:0016043 GO:0016192 GO:0016363 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0019882 GO:0019884 GO:0019886 GO:0022402 GO:0022607 GO:0023051 GO:0030198 GO:0030496 GO:0030705 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0042127 GO:0042546 GO:0042623 GO:0043062 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044085 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0045171 GO:0045229 GO:0045893 GO:0045935 GO:0046907 GO:0048002 GO:0048193 GO:0048285 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051179 GO:0051225 GO:0051231 GO:0051234 GO:0051252 GO:0051254 GO:0051255 GO:0051256 GO:0051276 GO:0051301 GO:0051641 GO:0051649 GO:0060255 GO:0061640 GO:0065007 GO:0070013 GO:0070726 GO:0070925 GO:0071554 GO:0071555 GO:0071668 GO:0071669 GO:0071840 GO:0080090 GO:0090307 GO:0097159 GO:0098813 GO:0098930 GO:0099080 GO:0099081 GO:0099111 GO:0099512 GO:0099513 GO:0140014 GO:1901363 GO:1902680 GO:1902850 GO:1903047 GO:1903506 GO:1903508 GO:1990939 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin

Protein Analysis

356

Amino Acids

40.49

Weight (kDa)

9.62

Isoelectric Point (pI)

40.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0029218)

Species Orthologous Gene IDs
pyrus_communis pycom02g14280
rosa_multiflora Rmu_ssc0000338.1_g000002

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 859
AccB1I GGYRCC 1 cut(s) 859
AccBSI CCGCTC 1 cut(s) 303
AciI CCGC 5 cut(s) 46, 303, 450, 830, 909
AclWI GGATC 2 cut(s) 148, 1007
AcsI RAATTY 1 cut(s) 703
AdeI CACNNNGTG 1 cut(s) 335
AfaI GTAC 5 cut(s) 84, 286, 478, 688, 861
AfiI CCNNNNNNNGG 1 cut(s) 547
AflII CTTAAG 2 cut(s) 50, 445
AgsI TTSAA 5 cut(s) 11, 262, 387, 506, 821
AjnI CCWGG 1 cut(s) 126
Alw26I GTCTC 4 cut(s) 759, 839, 979, 1010
AlwI GGATC 2 cut(s) 148, 1007
AoxI GGCC 3 cut(s) 252, 1028, 1034
ApeKI GCWGC 5 cut(s) 29, 233, 524, 537, 781
ApoI RAATTY 1 cut(s) 703
Asp700I GAANNNNTTC 1 cut(s) 355
Asp718I GGTACC 1 cut(s) 859
AspS9I GGNCC 1 cut(s) 746
AsuHPI GGTGA 2 cut(s) 412, 652
AvaII GGWCC 1 cut(s) 746
BanI GGYRCC 1 cut(s) 859
BarI GAAGNNNNNNTAC 4 cut(s) 129, 161, 679, 711
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 375
BbvI GCAGC 5 cut(s) 41, 220, 511, 524, 793
BccI CCATC 4 cut(s) 397, 652, 803, 850
BciT130I CCWGG 1 cut(s) 128
BclI TGATCA 1 cut(s) 160
BcoDI GTCTC 4 cut(s) 759, 839, 979, 1010
BfaI CTAG 2 cut(s) 123, 890
BfmI CTRYAG 2 cut(s) 525, 953
BfrI CTTAAG 2 cut(s) 50, 445
BisI GCNGC 7 cut(s) 30, 47, 234, 525, 538, 782, 831
BlpI GCTNAGC 1 cut(s) 374
BlsI GCNGC 7 cut(s) 31, 48, 235, 526, 539, 783, 832
Bme1390I CCNGG 1 cut(s) 128
Bme18I GGWCC 1 cut(s) 746
BmgT120I GGNCC 1 cut(s) 746
BmiI GGNNCC 2 cut(s) 748, 861
BmrFI CCNGG 1 cut(s) 128
BmrI ACTGGG 1 cut(s) 341
BmuI ACTGGG 1 cut(s) 341
BpiI GAAGAC 1 cut(s) 375
Bpu1102I GCTNAGC 1 cut(s) 374
BpuEI CTTGAG 2 cut(s) 383, 770
BsaAI YACGTR 1 cut(s) 86
BsaJI CCNNGG 3 cut(s) 127, 980, 1031
Bsc4I CCNNNNNNNGG 1 cut(s) 547
Bse1I ACTGG 4 cut(s) 243, 336, 541, 802
Bse3DI GCAATG 1 cut(s) 139
BseBI CCWGG 1 cut(s) 128
BseDI CCNNGG 3 cut(s) 127, 980, 1031
BseGI GGATG 1 cut(s) 739
BseLI CCNNNNNNNGG 1 cut(s) 547
BseMI GCAATG 1 cut(s) 139
BseMII CTCAG 4 cut(s) 108, 365, 1005, 1064
BseNI ACTGG 4 cut(s) 243, 336, 541, 802
BseXI GCAGC 5 cut(s) 41, 220, 511, 524, 793
BseYI CCCAGC 1 cut(s) 769
BsgI GTGCAG 1 cut(s) 219
Bsh1285I CGRYCG 1 cut(s) 454
BshFI GGCC 3 cut(s) 254, 1030, 1036
BshNI GGYRCC 1 cut(s) 859
BsiEI CGRYCG 1 cut(s) 454
BslFI GGGAC 2 cut(s) 732, 882
BslI CCNNNNNNNGG 1 cut(s) 547
BsmAI GTCTC 4 cut(s) 759, 839, 979, 1010
BsmFI GGGAC 2 cut(s) 732, 882
BsmI GAATGC 1 cut(s) 307
BsnI GGCC 3 cut(s) 254, 1030, 1036
Bsp143I GATC 4 cut(s) 140, 160, 271, 999
Bsp1720I GCTNAGC 1 cut(s) 374
BspACI CCGC 5 cut(s) 46, 303, 450, 830, 909
BspANI GGCC 3 cut(s) 254, 1030, 1036
BspCNI CTCAG 4 cut(s) 107, 366, 1004, 1063
BspHI TCATGA 1 cut(s) 163
BspLI GGNNCC 2 cut(s) 748, 861
BspMAI CTGCAG 1 cut(s) 529
BspPI GGATC 2 cut(s) 148, 1007
BspT107I GGYRCC 1 cut(s) 859
BspTI CTTAAG 2 cut(s) 50, 445
BsrBI CCGCTC 1 cut(s) 303
BsrDI GCAATG 1 cut(s) 139
BsrI ACTGG 4 cut(s) 243, 336, 541, 802
BssECI CCNNGG 3 cut(s) 127, 980, 1031
BssMI GATC 4 cut(s) 140, 160, 271, 999
BssSI CACGAG 1 cut(s) 395
BssT1I CCWWGG 1 cut(s) 980
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 1 cut(s) 128
Bst4CI ACNGT 3 cut(s) 153, 898, 957
Bst6I CTCTTC 2 cut(s) 18, 923
BstAFI CTTAAG 2 cut(s) 50, 445
BstBAI YACGTR 1 cut(s) 86
BstC8I GCNNGC 3 cut(s) 267, 305, 535
BstDEI CTNAG 5 cut(s) 94, 374, 492, 991, 1050
BstF5I GGATG 1 cut(s) 739
BstKTI GATC 4 cut(s) 143, 163, 274, 1002
BstMAI GTCTC 4 cut(s) 759, 839, 979, 1010
BstMBI GATC 4 cut(s) 140, 160, 271, 999
BstMCI CGRYCG 1 cut(s) 454
BstMWI GCNNNNNNNGC 3 cut(s) 530, 583, 592
BstNI CCWGG 1 cut(s) 128
BstNSI RCATGY 3 cut(s) 373, 382, 577
BstSCI CCNGG 1 cut(s) 126
BstSFI CTRYAG 2 cut(s) 525, 953
BstV1I GCAGC 5 cut(s) 41, 220, 511, 524, 793
BstV2I GAAGAC 1 cut(s) 375
BstX2I RGATCY 1 cut(s) 140
BstXI CCANNNNNNTGG 1 cut(s) 331
BstYI RGATCY 1 cut(s) 140
BsuRI GGCC 3 cut(s) 254, 1030, 1036
BtgZI GCGATG 1 cut(s) 1026
BtsCI GGATG 1 cut(s) 739
BtsIMutI CAGTG 3 cut(s) 236, 329, 950
Cac8I GCNNGC 3 cut(s) 267, 305, 535
CciI TCATGA 1 cut(s) 163
Cfr13I GGNCC 1 cut(s) 746
CseI GACGC 1 cut(s) 497
Csp6I GTAC 5 cut(s) 83, 285, 477, 687, 860
CviAII CATG 7 cut(s) 164, 325, 370, 379, 559, 574, 905
CviQI GTAC 5 cut(s) 83, 285, 477, 687, 860
DdeI CTNAG 5 cut(s) 94, 374, 492, 991, 1050
DpnI GATC 4 cut(s) 142, 162, 273, 1001
DpnII GATC 4 cut(s) 140, 160, 271, 999
DraI TTTAAA 1 cut(s) 961
DraIII CACNNNGTG 1 cut(s) 335
Eam1104I CTCTTC 2 cut(s) 18, 923
EarI CTCTTC 2 cut(s) 18, 923
Eco130I CCWWGG 1 cut(s) 980
Eco147I AGGCCT 1 cut(s) 1036
Eco47I GGWCC 1 cut(s) 746
EcoRI GAATTC 1 cut(s) 703
EcoRII CCWGG 1 cut(s) 126
EcoT14I CCWWGG 1 cut(s) 980
ErhI CCWWGG 1 cut(s) 980
FaeI CATG 7 cut(s) 167, 328, 373, 382, 562, 577, 908
FalI AAGNNNNNCTT 2 cut(s) 340, 372
FaqI GGGAC 2 cut(s) 732, 882
FatI CATG 7 cut(s) 163, 324, 369, 378, 558, 573, 904
FauI CCCGC 1 cut(s) 296
FbaI TGATCA 1 cut(s) 160
Fnu4HI GCNGC 7 cut(s) 30, 47, 234, 525, 538, 782, 831
FokI GGATG 1 cut(s) 746
Fsp4HI GCNGC 7 cut(s) 30, 47, 234, 525, 538, 782, 831
FspBI CTAG 2 cut(s) 123, 890
GluI GCNGC 7 cut(s) 30, 47, 234, 525, 538, 782, 831
GsaI CCCAGC 1 cut(s) 773
HaeIII GGCC 3 cut(s) 254, 1030, 1036
HgaI GACGC 1 cut(s) 497
Hin1II CATG 7 cut(s) 167, 328, 373, 382, 562, 577, 908
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HindIII AAGCTT 1 cut(s) 914
HinfI GANTC 3 cut(s) 466, 824, 987
HpaI GTTAAC 1 cut(s) 100
HphI GGTGA 2 cut(s) 412, 652
Hpy166II GTNNAC 4 cut(s) 100, 458, 689, 792
Hpy188I TCNGA 4 cut(s) 421, 627, 994, 1053
Hpy188III TCNNGA 4 cut(s) 164, 312, 821, 839
Hpy8I GTNNAC 4 cut(s) 100, 458, 689, 792
Hpy99I CGWCG 1 cut(s) 491
HpyAV CCTTC 2 cut(s) 131, 637
HpyCH4III ACNGT 3 cut(s) 153, 898, 957
HpyCH4IV ACGT 2 cut(s) 85, 460
HpyCH4V TGCA 5 cut(s) 184, 236, 338, 527, 577
HpyF10VI GCNNNNNNNGC 3 cut(s) 530, 583, 592
HpyF3I CTNAG 5 cut(s) 94, 374, 492, 991, 1050
HpySE526I ACGT 2 cut(s) 85, 460
Hsp92II CATG 7 cut(s) 167, 328, 373, 382, 562, 577, 908
KpnI GGTACC 1 cut(s) 863
Ksp22I TGATCA 1 cut(s) 160
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 4 cut(s) 140, 160, 271, 999
LmnI GCTCC 2 cut(s) 436, 634
Lsp1109I GCAGC 5 cut(s) 41, 220, 511, 524, 793
MaeI CTAG 2 cut(s) 123, 890
MaeII ACGT 2 cut(s) 85, 460
MaeIII GTNAC 4 cut(s) 86, 327, 598, 762
MalI GATC 4 cut(s) 142, 162, 273, 1001
MbiI CCGCTC 1 cut(s) 303
MboI GATC 4 cut(s) 140, 160, 271, 999
MboII GAAGA 9 cut(s) 35, 69, 360, 375, 440, 565, 674, 895, 940
MflI RGATCY 1 cut(s) 140
MluCI AATT 6 cut(s) 56, 224, 564, 703, 872, 1023
MlyI GAGTC 1 cut(s) 981
MmeI TCCRAC 2 cut(s) 42, 443
MnlI CCTC 7 cut(s) 19, 287, 415, 613, 915, 1026, 1047
MroXI GAANNNNTTC 1 cut(s) 355
MseI TTAA 8 cut(s) 51, 99, 446, 516, 567, 719, 728, 960
MslI CAYNNNNRTG 1 cut(s) 1011
MspA1I CMGCKG 2 cut(s) 415, 586
MspCI CTTAAG 2 cut(s) 50, 445
MspR9I CCNGG 1 cut(s) 128
Mva1269I GAATGC 1 cut(s) 307
MvaI CCWGG 1 cut(s) 128
MwoI GCNNNNNNNGC 3 cut(s) 530, 583, 592
NdeII GATC 4 cut(s) 140, 160, 271, 999
NlaIII CATG 7 cut(s) 167, 328, 373, 382, 562, 577, 908
NlaIV GGNNCC 2 cut(s) 748, 861
NmeAIII GCCGAG 1 cut(s) 1056
NmuCI GTSAC 4 cut(s) 86, 327, 598, 762
NspI RCATGY 3 cut(s) 373, 382, 577
PagI TCATGA 1 cut(s) 163
PceI AGGCCT 1 cut(s) 1036
PctI GAATGC 1 cut(s) 307
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 2 cut(s) 466, 824
PkrI GCNGC 7 cut(s) 31, 48, 235, 526, 539, 783, 832
PleI GAGTC 1 cut(s) 981
PpsI GAGTC 1 cut(s) 981
Ppu21I YACGTR 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 126
PspFI CCCAGC 1 cut(s) 769
PspGI CCWGG 1 cut(s) 126
PspN4I GGNNCC 2 cut(s) 748, 861
PspPI GGNCC 1 cut(s) 746
PstI CTGCAG 1 cut(s) 529
PsuI RGATCY 1 cut(s) 140
PvuII CAGCTG 2 cut(s) 415, 586
RsaI GTAC 5 cut(s) 84, 286, 478, 688, 861
RsaNI GTAC 5 cut(s) 83, 285, 477, 687, 860
RseI CAYNNNNRTG 1 cut(s) 1011
SaqAI TTAA 8 cut(s) 51, 99, 446, 516, 567, 719, 728, 960
SatI GCNGC 7 cut(s) 30, 47, 234, 525, 538, 782, 831
Sau3AI GATC 4 cut(s) 140, 160, 271, 999
Sau96I GGNCC 1 cut(s) 746
SchI GAGTC 1 cut(s) 981
ScrFI CCNGG 1 cut(s) 128
SfcI CTRYAG 2 cut(s) 525, 953
SinI GGWCC 1 cut(s) 746
SmiMI CAYNNNNRTG 1 cut(s) 1011
SmlI CTYRAG 4 cut(s) 50, 362, 445, 785
SmoI CTYRAG 4 cut(s) 50, 362, 445, 785
Sse9I AATT 6 cut(s) 56, 224, 564, 703, 872, 1023
SseBI AGGCCT 1 cut(s) 1036
SsiI CCGC 5 cut(s) 46, 303, 450, 830, 909
SspMI CTAG 2 cut(s) 123, 890
StuI AGGCCT 1 cut(s) 1036
StyD4I CCNGG 1 cut(s) 126
StyI CCWWGG 1 cut(s) 980
TaaI ACNGT 3 cut(s) 153, 898, 957
TaiI ACGT 2 cut(s) 88, 463
TasI AATT 6 cut(s) 56, 224, 564, 703, 872, 1023
TatI WGTACW 1 cut(s) 686
TauI GCSGC 2 cut(s) 49, 833
TfiI GAWTC 2 cut(s) 466, 824
Tru1I TTAA 8 cut(s) 51, 99, 446, 516, 567, 719, 728, 960
Tru9I TTAA 8 cut(s) 51, 99, 446, 516, 567, 719, 728, 960
TscAI CASTG 3 cut(s) 243, 336, 950
TseFI GTSAC 4 cut(s) 86, 327, 598, 762
TseI GCWGC 5 cut(s) 29, 233, 524, 537, 781
Tsp45I GTSAC 4 cut(s) 86, 327, 598, 762
TspDTI ATGAA 3 cut(s) 150, 207, 896
TspRI CASTG 3 cut(s) 243, 336, 950
Vha464I CTTAAG 2 cut(s) 50, 445
VpaK11BI GGWCC 1 cut(s) 746
XapI RAATTY 1 cut(s) 703
XceI RCATGY 3 cut(s) 373, 382, 577
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 2 cut(s) 123, 890
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.