pycom02g23820

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
21935571 .. 21936027
457 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g23820.1

Sequence Viewer

Length: 261 bp
ATGGTAAATGATTGGCTTCAATCATTATACAATGCTAGCGCTCAATGGGTACCTGTGTATTTCTCGGATTCCTTTTTTGCTGCTATATCTCCCAATCAAGAGTATGATGGCTCCTTTTTTGAAGGGAAATGGAAACAGACTTTTCTGATTGTGATTTGTGTAGTTTTTCAGTTTTATTATTACTTACCAATGCTCTTTGCTTTTCGTTTTATAGGTCTCCAAGTATGTTGTTGCAGCACATTAGGTCTGTTGGGATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

87

Amino Acids

10.0

Weight (kDa)

4.44

Isoelectric Point (pI)

45.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029223)

Species Orthologous Gene IDs
pyrus_communis pycom02g23820 pycom06g19480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 49
AccB1I GGYRCC 1 cut(s) 49
AfaI GTAC 1 cut(s) 51
AfeI AGCGCT 1 cut(s) 40
AgsI TTSAA 2 cut(s) 20, 122
Alw26I GTCTC 1 cut(s) 221
Aor51HI AGCGCT 1 cut(s) 40
ApeKI GCWGC 2 cut(s) 80, 234
Asp718I GGTACC 1 cut(s) 49
AspLEI GCGC 1 cut(s) 41
AsuNHI GCTAGC 1 cut(s) 35
BaeI ACNNNNGTAYC 2 cut(s) 41, 74
BanI GGYRCC 1 cut(s) 49
BbvI GCAGC 2 cut(s) 67, 246
BccI CCATC 1 cut(s) 101
BcoDI GTCTC 1 cut(s) 221
BfaI CTAG 1 cut(s) 36
BfoI RGCGCY 1 cut(s) 42
BisI GCNGC 2 cut(s) 81, 235
BlsI GCNGC 2 cut(s) 82, 236
BmiI GGNNCC 2 cut(s) 51, 112
BmtI GCTAGC 1 cut(s) 39
BsaI GGTCTC 1 cut(s) 221
BseXI GCAGC 2 cut(s) 67, 246
BshNI GGYRCC 1 cut(s) 49
BsmAI GTCTC 1 cut(s) 221
Bso31I GGTCTC 1 cut(s) 221
BspLI GGNNCC 2 cut(s) 51, 112
BspOI GCTAGC 1 cut(s) 39
BspT107I GGYRCC 1 cut(s) 49
BspTNI GGTCTC 1 cut(s) 221
BstC8I GCNNGC 1 cut(s) 37
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 1 cut(s) 41
BstMAI GTCTC 1 cut(s) 221
BstV1I GCAGC 2 cut(s) 67, 246
Cac8I GCNNGC 1 cut(s) 37
CfoI GCGC 1 cut(s) 41
Csp6I GTAC 1 cut(s) 50
CviJI RGCY 2 cut(s) 16, 111
CviKI_1 RGCY 2 cut(s) 16, 111
CviQI GTAC 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 221
Eco47III AGCGCT 1 cut(s) 40
FaiI YATR 5 cut(s) 28, 86, 105, 212, 226
Fnu4HI GCNGC 2 cut(s) 81, 235
Fsp4HI GCNGC 2 cut(s) 81, 235
FspBI CTAG 1 cut(s) 36
GlaI GCGC 1 cut(s) 40
GluI GCNGC 2 cut(s) 81, 235
HaeII RGCGCY 1 cut(s) 42
HhaI GCGC 1 cut(s) 41
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HinfI GANTC 1 cut(s) 68
Hpy188I TCNGA 2 cut(s) 67, 147
Hpy188III TCNNGA 1 cut(s) 98
HpyAV CCTTC 1 cut(s) 116
HpyCH4V TGCA 1 cut(s) 234
HspAI GCGC 1 cut(s) 39
KpnI GGTACC 1 cut(s) 53
LmnI GCTCC 1 cut(s) 116
LpnPI CCDG 1 cut(s) 66
Lsp1109I GCAGC 2 cut(s) 67, 246
MaeI CTAG 1 cut(s) 36
NheI GCTAGC 1 cut(s) 35
NlaIV GGNNCC 2 cut(s) 51, 112
PfeI GAWTC 1 cut(s) 68
PkrI GCNGC 2 cut(s) 82, 236
PspN4I GGNNCC 2 cut(s) 51, 112
RsaI GTAC 1 cut(s) 51
RsaNI GTAC 1 cut(s) 50
SatI GCNGC 2 cut(s) 81, 235
SetI ASST 3 cut(s) 55, 217, 247
SgeI CNNG 5 cut(s) 48, 65, 76, 110, 233
SspMI CTAG 1 cut(s) 36
TfiI GAWTC 1 cut(s) 68
TseI GCWGC 2 cut(s) 80, 234
XspI CTAG 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.