pycom06g19480

Protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
22893380 .. 22893745
366 bp
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UTR
Exon/CDS
Intron
pycom06g19480.1

Sequence Viewer

Length: 366 bp
ATGTCAAATGAATGGTGCATCATGGAATGTCAGAGAAATGATTGGCTTCAATCATTATACAATGCTCGCGCTCAATGGGCACCTGTGTATTTCCGAGATTCCTTTTTTGCTGCTATATCTCCCAATCAAGAGTATGATGGCTTCTTTTTTGAAGGCTATGTGAATCAACAGACCATATTACCATTGTTCTTTAGGCAATATGAAAGTGCTTTCAAGAACTGGTTTGAAAGGGAAATAGAATTAGACTTTCTGATTGTGATTTGTGTAGTTTTTTTGTTTTATTATTACTTACCAATGCTCTTTGCTTTTCATTTTATAGGTCTCCATGTATGTTGTTGCAACACATTAGGTCTGTTGGGATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

14.59

Weight (kDa)

4.63

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029223)

Species Orthologous Gene IDs
pyrus_communis pycom02g23820 pycom06g19480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 79
AccII CGCG 1 cut(s) 69
AgsI TTSAA 4 cut(s) 50, 152, 214, 227
Alw26I GTCTC 1 cut(s) 326
ApeKI GCWGC 1 cut(s) 110
AspLEI GCGC 1 cut(s) 71
BaeGI GKGCMC 1 cut(s) 82
BanI GGYRCC 1 cut(s) 79
BarI GAAGNNNNNNTAC 2 cut(s) 125, 157
BbvI GCAGC 1 cut(s) 97
BccI CCATC 1 cut(s) 131
BcoDI GTCTC 1 cut(s) 326
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
BmiI GGNNCC 1 cut(s) 81
BmsI GCATC 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 326
Bse1I ACTGG 1 cut(s) 224
BseNI ACTGG 1 cut(s) 224
BseSI GKGCMC 1 cut(s) 82
BseXI GCAGC 1 cut(s) 97
Bsh1236I CGCG 1 cut(s) 69
BshNI GGYRCC 1 cut(s) 79
BsmAI GTCTC 1 cut(s) 326
Bso31I GGTCTC 1 cut(s) 326
Bsp1286I GDGCHC 1 cut(s) 82
BspFNI CGCG 1 cut(s) 69
BspLI GGNNCC 1 cut(s) 81
BspT107I GGYRCC 1 cut(s) 79
BspTNI GGTCTC 1 cut(s) 326
BsrI ACTGG 1 cut(s) 224
BstC8I GCNNGC 1 cut(s) 67
BstFNI CGCG 1 cut(s) 69
BstHHI GCGC 1 cut(s) 71
BstMAI GTCTC 1 cut(s) 326
BstMWI GCNNNNNNNGC 1 cut(s) 77
BstSLI GKGCMC 1 cut(s) 82
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 97
Cac8I GCNNGC 1 cut(s) 67
CfoI GCGC 1 cut(s) 71
CviAII CATG 2 cut(s) 22, 326
CviJI RGCY 3 cut(s) 46, 141, 156
CviKI_1 RGCY 3 cut(s) 46, 141, 156
Eco31I GGTCTC 1 cut(s) 326
FaeI CATG 2 cut(s) 25, 329
FatI CATG 2 cut(s) 21, 325
Fnu4HI GCNGC 1 cut(s) 111
Fsp4HI GCNGC 1 cut(s) 111
GlaI GCGC 1 cut(s) 70
GluI GCNGC 1 cut(s) 111
HhaI GCGC 1 cut(s) 71
Hin1II CATG 2 cut(s) 25, 329
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HinfI GANTC 2 cut(s) 98, 163
Hpy188I TCNGA 3 cut(s) 33, 95, 252
Hpy188III TCNNGA 2 cut(s) 128, 214
HpyAV CCTTC 1 cut(s) 146
HpyCH4V TGCA 2 cut(s) 18, 339
HpyF10VI GCNNNNNNNGC 1 cut(s) 77
Hsp92II CATG 2 cut(s) 25, 329
HspAI GCGC 1 cut(s) 69
LpnPI CCDG 2 cut(s) 96, 205
Lsp1109I GCAGC 1 cut(s) 97
LweI GCATC 1 cut(s) 27
MhlI GDGCHC 1 cut(s) 82
MluCI AATT 1 cut(s) 239
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 1 cut(s) 77
NlaIII CATG 2 cut(s) 25, 329
NlaIV GGNNCC 1 cut(s) 81
PfeI GAWTC 2 cut(s) 98, 163
PkrI GCNGC 1 cut(s) 112
PspN4I GGNNCC 1 cut(s) 81
SatI GCNGC 1 cut(s) 111
SduI GDGCHC 1 cut(s) 82
SetI ASST 3 cut(s) 85, 322, 352
SfaNI GCATC 1 cut(s) 27
SgeI CNNG 9 cut(s) 34, 78, 80, 95, 107, 140, 226, 232, 338
Sse9I AATT 1 cut(s) 239
TasI AATT 1 cut(s) 239
TfiI GAWTC 2 cut(s) 98, 163
TseI GCWGC 1 cut(s) 110
TspDTI ATGAA 3 cut(s) 24, 216, 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.