pycom02g24460

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
22623254 .. 22623523
270 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g24460.1

Sequence Viewer

Length: 270 bp
ATGTCGCGTTGTACCATCGATAGCAGTTCATTCTCAAGAAGTTGCAATTTTGTATCGTTCCTCTTCGAAAAGAGTGTAACAAAAGTGTCCCATGCTTCCTTTGGCGTTTTGGCATCCCGAATGTGCTCCAACATTTCTTCTTCAATTGTGGTCTTTAAAGCAAACATCGCTTTGCCTGCTTTAATTTTCCACTTTCGCAAGACGCCGTTAGCATCTTCCGCTGCCGGTTGTGTAACTTCACTACCACCGACAACCTCCCACAAGTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

90

Amino Acids

9.49

Weight (kDa)

9.95

Isoelectric Point (pI)

58.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029225)

Species Orthologous Gene IDs
pyrus_communis pycom02g24460 pycom13g15190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 7
AciI CCGC 1 cut(s) 219
AcyI GRCGYC 1 cut(s) 203
AfaI GTAC 1 cut(s) 13
AgsI TTSAA 1 cut(s) 144
Alw21I GWGCWC 1 cut(s) 128
ApeKI GCWGC 1 cut(s) 221
AsuII TTCGAA 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 128
BbvI GCAGC 1 cut(s) 208
BccI CCATC 1 cut(s) 23
BceAI ACGGC 1 cut(s) 190
BisI GCNGC 1 cut(s) 222
BlsI GCNGC 1 cut(s) 223
BmsI GCATC 2 cut(s) 122, 221
Bpu14I TTCGAA 1 cut(s) 66
BpuEI CTTGAG 1 cut(s) 19
Bsa29I ATCGAT 1 cut(s) 18
BsaHI GRCGYC 1 cut(s) 203
Bse118I RCCGGY 1 cut(s) 224
BseCI ATCGAT 1 cut(s) 18
BseGI GGATG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 208
Bsh1236I CGCG 1 cut(s) 7
BshVI ATCGAT 1 cut(s) 18
BsiHKAI GWGCWC 1 cut(s) 128
BsiSI CCGG 1 cut(s) 225
BslFI GGGAC 1 cut(s) 73
BsmFI GGGAC 1 cut(s) 73
Bsp119I TTCGAA 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 128
BspACI CCGC 1 cut(s) 219
BspDI ATCGAT 1 cut(s) 18
BspFNI CGCG 1 cut(s) 7
BspT104I TTCGAA 1 cut(s) 66
BsrFI RCCGGY 1 cut(s) 224
BssAI RCCGGY 1 cut(s) 224
BssNI GRCGYC 1 cut(s) 203
Bst6I CTCTTC 1 cut(s) 68
BstACI GRCGYC 1 cut(s) 203
BstBI TTCGAA 1 cut(s) 66
BstC8I GCNNGC 1 cut(s) 177
BstF5I GGATG 1 cut(s) 113
BstFNI CGCG 1 cut(s) 7
BstMWI GCNNNNNNNGC 3 cut(s) 167, 176, 218
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 1 cut(s) 208
Bsu15I ATCGAT 1 cut(s) 18
BsuTUI ATCGAT 1 cut(s) 18
BtgZI GCGATG 1 cut(s) 151
BtsCI GGATG 1 cut(s) 113
Cac8I GCNNGC 1 cut(s) 177
Cfr10I RCCGGY 1 cut(s) 224
ClaI ATCGAT 1 cut(s) 18
CseI GACGC 1 cut(s) 211
Csp6I GTAC 1 cut(s) 12
CspCI CAANNNNNGTGG 1 cut(s) 248
CviAII CATG 1 cut(s) 92
CviQI GTAC 1 cut(s) 12
DraI TTTAAA 1 cut(s) 157
Eam1104I CTCTTC 1 cut(s) 68
EarI CTCTTC 1 cut(s) 68
FaeI CATG 1 cut(s) 95
FaiI YATR 1 cut(s) 93
FaqI GGGAC 1 cut(s) 73
FatI CATG 1 cut(s) 91
Fnu4HI GCNGC 1 cut(s) 222
FokI GGATG 1 cut(s) 100
Fsp4HI GCNGC 1 cut(s) 222
GluI GCNGC 1 cut(s) 222
HapII CCGG 1 cut(s) 225
HgaI GACGC 1 cut(s) 211
Hin1I GRCGYC 1 cut(s) 203
Hin1II CATG 1 cut(s) 95
HpaII CCGG 1 cut(s) 225
Hpy188III TCNNGA 3 cut(s) 36, 117, 267
HpyCH4V TGCA 1 cut(s) 45
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 176, 218
Hsp92I GRCGYC 1 cut(s) 203
Hsp92II CATG 1 cut(s) 95
LmnI GCTCC 1 cut(s) 131
LpnPI CCDG 2 cut(s) 189, 238
Lsp1109I GCAGC 1 cut(s) 208
LweI GCATC 2 cut(s) 122, 221
MaeIII GTNAC 2 cut(s) 76, 232
MboII GAAGA 4 cut(s) 55, 129, 132, 207
MfeI CAATTG 1 cut(s) 144
MhlI GDGCHC 1 cut(s) 128
MluCI AATT 3 cut(s) 46, 144, 183
MmeI TCCRAC 1 cut(s) 153
MnlI CCTC 2 cut(s) 71, 265
MseI TTAA 2 cut(s) 156, 182
MspA1I CMGCKG 1 cut(s) 221
MspI CCGG 1 cut(s) 225
MunI CAATTG 1 cut(s) 144
MvnI CGCG 1 cut(s) 7
MwoI GCNNNNNNNGC 3 cut(s) 167, 176, 218
NlaIII CATG 1 cut(s) 95
NspV TTCGAA 1 cut(s) 66
PkrI GCNGC 1 cut(s) 223
RsaI GTAC 1 cut(s) 13
RsaNI GTAC 1 cut(s) 12
SaqAI TTAA 2 cut(s) 156, 182
SatI GCNGC 1 cut(s) 222
SduI GDGCHC 1 cut(s) 128
SetI ASST 1 cut(s) 257
SfaNI GCATC 2 cut(s) 122, 221
SfuI TTCGAA 1 cut(s) 66
SgeI CNNG 7 cut(s) 18, 48, 104, 129, 188, 211, 237
SmlI CTYRAG 1 cut(s) 34
SmoI CTYRAG 1 cut(s) 34
Sse9I AATT 3 cut(s) 46, 144, 183
SsiI CCGC 1 cut(s) 219
TaqI TCGA 2 cut(s) 18, 66
TasI AATT 3 cut(s) 46, 144, 183
Tru1I TTAA 2 cut(s) 156, 182
Tru9I TTAA 2 cut(s) 156, 182
TseI GCWGC 1 cut(s) 221
TspDTI ATGAA 1 cut(s) 18
XcmI CCANNNNNNNNNTGG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.