Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0014991

Physical Location & Seq

Genomic Coordinates Reverse (-)

4589865 .. 4593145

Gene Structure 3281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1596 bp

ATGGCTTTCCGGCGAAAACCCATCACCTGGGCTCTCTTCTTCTTCTACCTCTTGTTGGTCTCCACCCAATTCATTGCGGCGCGCAAAACCCCCAAAATCAAAGGGCCTATCAAAACGGTGGTCGTCGTCGTCATGGAAAACCGCTCCTTTGACCACATCTTTGGCTGGCTCAAGTCGACCCGACCCGACATCGACGGCCTGAACGGGAACGAATCGAACCCGATTTCCGTCTCGCAACCCGGCTCGGCTCGAGTCCGCGTCTCAAACGACGCCTTTTTCATCGACTCCGACCCGGGCCACTCGTTTCAGGCGATTCGGGAACAGATATTCGGGTCGAACGAGAGCTCCGAGAACCCGGCTCCGATGAACGGGTTCGCTCAGCAGGCGGAGAGTATGGGCGAGGGGATGGCGAGGACGGTGATGAGCGGGTTCAAGCCGGAAGTTCTCCCGGTCTACACCGGGTTAGCAAACGAGTTCGCCGTGTTCGACCGGTGGTTCGCGTCCGTGCCGGCGTCGACTCAGCCGAACCGGTTCTACGTCCACTCGGCCACGTCACACGGCGCCATGAGCAACGTCCGCAAGGACCTCATCCACGGCTTCCCTCAGACGATCTTCGACTCTCTGGACGAAAATGGCCTCGACTTCGGCATTTATTACCAGAACATCCCCGCCACGCTCTTCTTCAACAGCCTGAGGAAACTGAAGCACGTGATGAAATTCCACAGCTACGCGCTGACGTTCAAGCGGCACGCGCGGCGCGGGAAGCTGCCCAACTACGCGGTGATCGAGCAGCGGTACTTCGACGTCAAGGAGCTTCCCGCCAATGACGACCACCCGTCGCATGACGTGGCGCGCGGGCAGAGGTTCGTAAAGGAGGTGTACGAGACGCTGAGGGCTAGCCCGCAGTGGAAAGAAATGGCATTGCTGATTACTTACGACGAGCACGGCGGGTTTTACGACCACGTGCCGACGCCGGTTTCAGGTGTGCCGAGCCCGGATGGGATCGAGGGGCCCGACCCGTATTATTTCCGGTTTGACCGGTTGGGTGTGCGGGTGCCGACCATACTCGTCTCGCCGTGGGTCGAAAAGGGTACCGTGATCCATGAGCCAACAGGGCCGAAACCACATTCCCAATTTGAGCATTCTTCCATCCCTGCCACTGTGAAGAAGCTATTCAATTTGAAATCAAACTTCTTGACAAAGAGAGATGCATGGGCTGGTACTTTTGAGAATTATTTTACCCTCCGCAGCACTCCTCGTGATGACTGTCCAGAAACTCTTCCAGAGGTGACAACCTCACTGAGGCCAGGCGGACCCAGAGAAGATTCGAGCCTCTCAGAGTTCCAAGTCGAGCTTATCCAGCTTGCATCCCAGCTCAATGGCGATCACGTCCTCAACACCTACCCTAATATCGGAGAGACCATGACAGTGCGTGAAGCAAACATTTACGCAGAGGATGCAGTCAAGAGGTTCCTGGAAGCCGGAAGAGCTGCTCTAAAAGCCGGAGCGAATGAGTCTGCAATTGTTACGATGAGAGCTTCTCTCACCAGCCGAGTTAACGCACAAGGTCATAGCTCCTACCTAGAAACTCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003993 GO:0004620 GO:0004629 GO:0006629 GO:0006644 GO:0006793 GO:0006796 GO:0008081 GO:0008150 GO:0008152 GO:0009056 GO:0009395 GO:0009405 GO:0009987 GO:0016042 GO:0016298 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019637 GO:0034480 GO:0035821 GO:0042578 GO:0044003 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044403 GO:0044419 GO:0046434 GO:0051701 GO:0051704 GO:0051817 GO:0052008 GO:0052043 GO:0052111 GO:0052185 GO:0052188 GO:0052368 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00562 ko00564 ko00565 ko01100 ko01110 ko02024 ko04919 map00562 map00564 map00565 map01100 map01110 map02024 map04919

Pfam Domains

Protein Families

Phosphoesterase

Protein Analysis

532

Amino Acids

59.62

Weight (kDa)

7.01

Isoelectric Point (pI)

42.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phosphoesterase	PF04185	37 - 395	6e-107	Phosphoesterase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014991)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07230
fragaria_vesca	FvH4_3g38460 FvH4_3g38460
malus_domestica	MD03G1071800.v1.1 MD11G1075900.v1.1
prunus_persica	Prupe.6G058400_v2.0.a1
pyrus_communis	pycom03g05800
rosa_chinensis	RchiOBHm_Chr5g0069151
rosa_laevigata	RLG00000036040
rosa_multiflora	Rmu_sc0000936.1_g000014
rosa_roxburghii	Rroxscaffold_1G00011640
rosa_rugosa	Rorug05G0396300
rosa_samantha	Rh5AG453200 Rh5CG494800
rosa_wichuraiana	Rw0G006040 Rw5G042320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	807
Acc65I	GGTACC	1 cut(s)	1091
AccB1I	GGYRCC	3 cut(s)	560, 1054, 1091
AccB7I	CCANNNNNTGG	1 cut(s)	27
AccBSI	CCGCTC	2 cut(s)	144, 426
AccI	GTMKAC	3 cut(s)	176, 453, 515
AclWI	GGATC	2 cut(s)	1010, 1093
AcoI	YGGCCR	1 cut(s)	546
AcsI	RAATTY	1 cut(s)	716
AcuI	CTGAAG	1 cut(s)	722
AcvI	CACGTG	2 cut(s)	709, 964
AcyI	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
AfaI	GTAC	4 cut(s)	797, 881, 1093, 1222
AfiI	CCNNNNNNNGG	6 cut(s)	27, 55, 368, 980, 1302, 1412
AgeI	ACCGGT	3 cut(s)	489, 528, 1038
AgsI	TTSAA	5 cut(s)	433, 685, 742, 1177, 1183
AhdI	GACNNNNNGTC	1 cut(s)	835
AjiI	CACGTC	3 cut(s)	552, 847, 1390
AjnI	CCWGG	3 cut(s)	26, 1306, 1473
AloI	GAACNNNNNNTCC	4 cut(s)	209, 241, 329, 361
Alw21I	GWGCWC	2 cut(s)	347, 945
Alw26I	GTCTC	6 cut(s)	64, 235, 265, 878, 1075, 1412
AlwI	GGATC	2 cut(s)	1010, 1093
Ama87I	CYCGRG	2 cut(s)	249, 292
AoxI	GGCC	8 cut(s)	104, 196, 295, 546, 634, 1010, 1115, 1304
ApaI	GGGCCC	1 cut(s)	1014
ApeKI	GCWGC	4 cut(s)	766, 790, 1248, 1490
ApoI	RAATTY	1 cut(s)	716
ArsI	GACNNNNNNTTYG	6 cut(s)	105, 137, 143, 175, 479, 511
AsiGI	ACCGGT	3 cut(s)	489, 528, 1038
Asp700I	GAANNNNTTC	4 cut(s)	371, 530, 1172, 1278
Asp718I	GGTACC	1 cut(s)	1091
AspLEI	GCGC	8 cut(s)	82, 84, 563, 733, 754, 759, 853, 855
AspS9I	GGNCC	7 cut(s)	104, 295, 583, 1010, 1011, 1115, 1313
AsuC2I	CCSGG	7 cut(s)	240, 293, 294, 356, 449, 460, 995
AsuHPI	GGTGA	5 cut(s)	16, 430, 793, 1300, 1537
AsuNHI	GCTAGC	1 cut(s)	896
AvaI	CYCGRG	2 cut(s)	249, 292
AvaII	GGWCC	2 cut(s)	583, 1313
AxyI	CCTNAGG	1 cut(s)	692
BaeGI	GKGCMC	1 cut(s)	1014
BanI	GGYRCC	3 cut(s)	560, 1054, 1091
BanII	GRGCYC	4 cut(s)	34, 347, 995, 1014
BauI	CACGAG	1 cut(s)	1257
BbrPI	CACGTG	2 cut(s)	709, 964
Bbv12I	GWGCWC	2 cut(s)	347, 945
BbvCI	CCTCAGC	1 cut(s)	890
BbvI	GCAGC	4 cut(s)	753, 802, 1260, 1477
BccI	CCATC	4 cut(s)	29, 400, 992, 1157
BceAI	ACGGC	6 cut(s)	211, 464, 574, 610, 961, 1060
BciT130I	CCWGG	3 cut(s)	28, 1308, 1475
BcnI	CCSGG	7 cut(s)	240, 293, 294, 356, 449, 460, 995
BcoDI	GTCTC	6 cut(s)	64, 235, 265, 878, 1075, 1412
BfaI	CTAG	2 cut(s)	897, 1583
BfoI	RGCGCY	1 cut(s)	564
BglI	GCCNNNNNGGC	1 cut(s)	1114
BisI	GCNGC	7 cut(s)	78, 746, 755, 767, 791, 1249, 1491
BlpI	GCTNAGC	1 cut(s)	378
BlsI	GCNGC	7 cut(s)	79, 747, 756, 768, 792, 1250, 1492
Bme18I	GGWCC	2 cut(s)	583, 1313
BmeRI	GACNNNNNGTC	1 cut(s)	835
BmeT110I	CYCGRG	2 cut(s)	249, 292
BmgBI	CACGTC	3 cut(s)	552, 847, 1390
BmgT120I	GGNCC	7 cut(s)	104, 295, 583, 1010, 1011, 1115, 1313
BmiI	GGNNCC	8 cut(s)	360, 562, 1011, 1012, 1056, 1093, 1315, 1472
BmsI	GCATC	3 cut(s)	1198, 1376, 1447
BmtI	GCTAGC	1 cut(s)	900
BplI	GAGNNNNNCTC	4 cut(s)	1525, 1557, 1527, 1559
Bpu10I	CCTNAGC	1 cut(s)	890
Bpu1102I	GCTNAGC	1 cut(s)	378
BpuEI	CTTGAG	1 cut(s)	155
BpuMI	CCSGG	7 cut(s)	240, 293, 294, 356, 449, 460, 995
BsaAI	YACGTR	2 cut(s)	709, 964
BsaHI	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
BsaI	GGTCTC	2 cut(s)	64, 1412
BsaJI	CCNNGG	4 cut(s)	27, 292, 592, 1076
BsaWI	WCCGGW	4 cut(s)	489, 528, 1029, 1038
BsaXI	ACNNNNNCTCC	2 cut(s)	329, 359
Bsc4I	CCNNNNNNNGG	6 cut(s)	27, 55, 368, 980, 1302, 1412
Bse118I	RCCGGY	5 cut(s)	489, 508, 528, 973, 1038
Bse21I	CCTNAGG	1 cut(s)	692
Bse3DI	GCAATG	2 cut(s)	72, 920
BseBI	CCWGG	3 cut(s)	28, 1308, 1475
BseDI	CCNNGG	4 cut(s)	27, 292, 592, 1076
BseGI	GGATG	7 cut(s)	411, 588, 663, 1003, 1149, 1367, 1462
BseLI	CCNNNNNNNGG	6 cut(s)	27, 55, 368, 980, 1302, 1412
BseMI	GCAATG	2 cut(s)	72, 920
BseMII	CTCAG	7 cut(s)	392, 533, 617, 683, 881, 1292, 1350
BsePI	GCGCGC	2 cut(s)	80, 851
BseRI	GAGGAG	1 cut(s)	1245
BseSI	GKGCMC	1 cut(s)	1014
BseXI	GCAGC	4 cut(s)	753, 802, 1260, 1477
BseYI	CCCAGC	1 cut(s)	1371
Bsh1285I	CGRYCG	1 cut(s)	490
BshFI	GGCC	8 cut(s)	106, 198, 297, 548, 636, 1012, 1117, 1306
BshNI	GGYRCC	3 cut(s)	560, 1054, 1091
BshTI	ACCGGT	3 cut(s)	489, 528, 1038
BsiEI	CGRYCG	1 cut(s)	490
BsiHKAI	GWGCWC	2 cut(s)	347, 945
BsiHKCI	CYCGRG	2 cut(s)	249, 292
BslI	CCNNNNNNNGG	6 cut(s)	27, 55, 368, 980, 1302, 1412
BsmAI	GTCTC	6 cut(s)	64, 235, 265, 878, 1075, 1412
BsmBI	CGTCTC	4 cut(s)	235, 265, 878, 1075
BsmI	GAATGC	1 cut(s)	1141
BsnI	GGCC	8 cut(s)	106, 198, 297, 548, 636, 1012, 1117, 1306
Bso31I	GGTCTC	2 cut(s)	64, 1412
BsoBI	CYCGRG	2 cut(s)	249, 292
Bsp120I	GGGCCC	1 cut(s)	1010
Bsp1286I	GDGCHC	5 cut(s)	34, 347, 945, 995, 1014
Bsp143I	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
Bsp1720I	GCTNAGC	1 cut(s)	378
BspANI	GGCC	8 cut(s)	106, 198, 297, 548, 636, 1012, 1117, 1306
BspCNI	CTCAG	7 cut(s)	391, 532, 616, 684, 882, 1293, 1349
BspLI	GGNNCC	8 cut(s)	360, 562, 1011, 1012, 1056, 1093, 1315, 1472
BspOI	GCTAGC	1 cut(s)	900
BspPI	GGATC	2 cut(s)	1010, 1093
BspQI	GCTCTTC	2 cut(s)	683, 1480
BspT107I	GGYRCC	3 cut(s)	560, 1054, 1091
BspTNI	GGTCTC	2 cut(s)	64, 1412
BsrBI	CCGCTC	2 cut(s)	144, 426
BsrDI	GCAATG	2 cut(s)	72, 920
BsrFI	RCCGGY	5 cut(s)	489, 508, 528, 973, 1038
BssAI	RCCGGY	5 cut(s)	489, 508, 528, 973, 1038
BssECI	CCNNGG	4 cut(s)	27, 292, 592, 1076
BssHII	GCGCGC	2 cut(s)	80, 851
BssMI	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
BssNI	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
BssSI	CACGAG	1 cut(s)	1257
Bst2BI	CACGAG	1 cut(s)	1257
Bst2UI	CCWGG	3 cut(s)	28, 1308, 1475
Bst4CI	ACNGT	6 cut(s)	118, 418, 1096, 1162, 1268, 1429
Bst6I	CTCTTC	4 cut(s)	41, 683, 1284, 1480
BstACI	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
BstAPI	GCANNNNNTGC	1 cut(s)	1457
BstBAI	YACGTR	2 cut(s)	709, 964
BstDEI	CTNAG	8 cut(s)	378, 519, 603, 692, 890, 1301, 1336, 1590
BstDSI	CCRYGG	2 cut(s)	592, 1076
BstENI	CCTNNNNNAGG	1 cut(s)	1300
BstF5I	GGATG	7 cut(s)	411, 588, 663, 1003, 1149, 1367, 1462
BstH2I	RGCGCY	1 cut(s)	564
BstHHI	GCGC	8 cut(s)	82, 84, 563, 733, 754, 759, 853, 855
BstKTI	GATC	5 cut(s)	612, 786, 1005, 1101, 1387
BstMAI	GTCTC	6 cut(s)	64, 235, 265, 878, 1075, 1412
BstMBI	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
BstMCI	CGRYCG	1 cut(s)	490
BstNI	CCWGG	3 cut(s)	28, 1308, 1475
BstSLI	GKGCMC	1 cut(s)	1014
BstV1I	GCAGC	4 cut(s)	753, 802, 1260, 1477
BstXI	CCANNNNNNTGG	2 cut(s)	161, 1379
Bsu36I	CCTNAGG	1 cut(s)	692
BsuRI	GGCC	8 cut(s)	106, 198, 297, 548, 636, 1012, 1117, 1306
BtgI	CCRYGG	2 cut(s)	592, 1076
BtrI	CACGTC	3 cut(s)	552, 847, 1390
BtsCI	GGATG	7 cut(s)	411, 588, 663, 1003, 1149, 1367, 1462
BtsI	GCAGTG	1 cut(s)	911
BtsIMutI	CAGTG	4 cut(s)	911, 1158, 1298, 1434
CfoI	GCGC	8 cut(s)	82, 84, 563, 733, 754, 759, 853, 855
Cfr10I	RCCGGY	5 cut(s)	489, 508, 528, 973, 1038
Cfr13I	GGNCC	7 cut(s)	104, 295, 583, 1010, 1011, 1115, 1313
Cfr9I	CCCGGG	1 cut(s)	292
CseI	GACGC	6 cut(s)	247, 278, 489, 501, 895, 979
Csp6I	GTAC	4 cut(s)	796, 880, 1092, 1221
CspAI	ACCGGT	3 cut(s)	489, 528, 1038
CviAII	CATG	6 cut(s)	133, 565, 842, 1103, 1212, 1423
CviQI	GTAC	4 cut(s)	796, 880, 1092, 1221
DdeI	CTNAG	8 cut(s)	378, 519, 603, 692, 890, 1301, 1336, 1590
DinI	GGCGCC	1 cut(s)	562
DpnI	GATC	5 cut(s)	611, 785, 1004, 1100, 1386
DpnII	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
DriI	GACNNNNNGTC	1 cut(s)	835
EaeI	YGGCCR	1 cut(s)	546
Eam1104I	CTCTTC	4 cut(s)	41, 683, 1284, 1480
Eam1105I	GACNNNNNGTC	1 cut(s)	835
EarI	CTCTTC	4 cut(s)	41, 683, 1284, 1480
EciI	GGCGGA	2 cut(s)	401, 1326
Ecl136II	GAGCTC	1 cut(s)	345
Eco24I	GRGCYC	4 cut(s)	34, 347, 995, 1014
Eco31I	GGTCTC	2 cut(s)	64, 1412
Eco47I	GGWCC	2 cut(s)	583, 1313
Eco53kI	GAGCTC	1 cut(s)	345
Eco57I	CTGAAG	1 cut(s)	722
Eco72I	CACGTG	2 cut(s)	709, 964
Eco81I	CCTNAGG	1 cut(s)	692
Eco88I	CYCGRG	2 cut(s)	249, 292
EcoICRI	GAGCTC	1 cut(s)	345
EcoNI	CCTNNNNNAGG	1 cut(s)	1300
EcoO109I	RGGNCCY	3 cut(s)	104, 583, 1010
EcoRII	CCWGG	3 cut(s)	26, 1306, 1473
EcoT22I	ATGCAT	1 cut(s)	1213
EcoT38I	GRGCYC	4 cut(s)	34, 347, 995, 1014
EgeI	GGCGCC	1 cut(s)	562
EheI	GGCGCC	1 cut(s)	562
Esp3I	CGTCTC	4 cut(s)	235, 265, 878, 1075
FaeI	CATG	6 cut(s)	136, 568, 845, 1106, 1215, 1426
FaiI	YATR	9 cut(s)	134, 395, 566, 843, 1064, 1104, 1213, 1424, 1572
FalI	AAGNNNNNCTT	2 cut(s)	1338, 1370
FatI	CATG	6 cut(s)	132, 564, 841, 1102, 1211, 1422
FauI	CCCGC	8 cut(s)	419, 676, 752, 826, 848, 909, 941, 1044
FblI	GTMKAC	3 cut(s)	176, 453, 515
Fnu4HI	GCNGC	7 cut(s)	78, 746, 755, 767, 791, 1249, 1491
FokI	GGATG	7 cut(s)	418, 575, 650, 1010, 1136, 1354, 1469
FriOI	GRGCYC	4 cut(s)	34, 347, 995, 1014
Fsp4HI	GCNGC	7 cut(s)	78, 746, 755, 767, 791, 1249, 1491
FspBI	CTAG	2 cut(s)	897, 1583
GlaI	GCGC	8 cut(s)	81, 83, 562, 732, 753, 758, 852, 854
GluI	GCNGC	7 cut(s)	78, 746, 755, 767, 791, 1249, 1491
GsaI	CCCAGC	1 cut(s)	1375
HaeII	RGCGCY	1 cut(s)	564
HaeIII	GGCC	8 cut(s)	106, 198, 297, 548, 636, 1012, 1117, 1306
HgaI	GACGC	6 cut(s)	247, 278, 489, 501, 895, 979
HhaI	GCGC	8 cut(s)	82, 84, 563, 733, 754, 759, 853, 855
Hin1I	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
Hin1II	CATG	6 cut(s)	136, 568, 845, 1106, 1215, 1426
Hin6I	GCGC	8 cut(s)	80, 82, 561, 731, 752, 757, 851, 853
HinP1I	GCGC	8 cut(s)	80, 82, 561, 731, 752, 757, 851, 853
HincII	GTYRAC	3 cut(s)	177, 516, 1558
HindII	GTYRAC	3 cut(s)	177, 516, 1558
HinfI	GANTC	8 cut(s)	212, 252, 284, 313, 517, 617, 1325, 1514
HpaI	GTTAAC	1 cut(s)	1558
HphI	GGTGA	5 cut(s)	16, 430, 793, 1300, 1537
Hpy166II	GTNNAC	6 cut(s)	177, 454, 516, 541, 880, 1558
Hpy188I	TCNGA	6 cut(s)	289, 349, 363, 606, 1339, 1415
Hpy188III	TCNNGA	7 cut(s)	317, 623, 1195, 1259, 1271, 1283, 1465
Hpy8I	GTNNAC	6 cut(s)	177, 454, 516, 541, 880, 1558
Hpy99I	CGWCG	9 cut(s)	128, 131, 197, 272, 517, 806, 841, 941, 973
HpyCH4III	ACNGT	6 cut(s)	118, 418, 1096, 1162, 1268, 1429
HpyCH4IV	ACGT	9 cut(s)	537, 551, 573, 708, 737, 804, 846, 963, 1389
HpyCH4V	TGCA	4 cut(s)	1211, 1367, 1460, 1520
HpyF3I	CTNAG	8 cut(s)	378, 519, 603, 692, 890, 1301, 1336, 1590
HpySE526I	ACGT	9 cut(s)	537, 551, 573, 708, 737, 804, 846, 963, 1389
Hsp92I	GRCGYC	5 cut(s)	270, 512, 561, 804, 971
Hsp92II	CATG	6 cut(s)	136, 568, 845, 1106, 1215, 1426
HspAI	GCGC	8 cut(s)	80, 82, 561, 731, 752, 757, 851, 853
KasI	GGCGCC	1 cut(s)	560
KpnI	GGTACC	1 cut(s)	1095
KroI	GCCGGC	1 cut(s)	508
KroNI	GCCGGC	1 cut(s)	510
KspAI	GTTAAC	1 cut(s)	1558
Kzo9I	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
LguI	GCTCTTC	2 cut(s)	683, 1480
LmnI	GCTCC	6 cut(s)	149, 350, 364, 811, 1505, 1580
Lsp1109I	GCAGC	4 cut(s)	753, 802, 1260, 1477
LweI	GCATC	3 cut(s)	1198, 1376, 1447
MaeI	CTAG	2 cut(s)	897, 1583
MaeII	ACGT	9 cut(s)	537, 551, 573, 708, 737, 804, 846, 963, 1389
MaeIII	GTNAC	3 cut(s)	552, 1288, 1525
MalI	GATC	5 cut(s)	611, 785, 1004, 1100, 1386
MbiI	CCGCTC	2 cut(s)	144, 426
MboI	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
MfeI	CAATTG	1 cut(s)	1521
MhlI	GDGCHC	5 cut(s)	34, 347, 945, 995, 1014
MluCI	AATT	6 cut(s)	68, 716, 1133, 1177, 1231, 1521
Mly113I	GGCGCC	1 cut(s)	561
MlyI	GAGTC	5 cut(s)	261, 278, 511, 611, 1523
MmeI	TCCRAC	1 cut(s)	312
Mph1103I	ATGCAT	1 cut(s)	1213
MroNI	GCCGGC	1 cut(s)	508
MroXI	GAANNNNTTC	4 cut(s)	371, 530, 1172, 1278
MseI	TTAA	1 cut(s)	1557
MslI	CAYNNNNRTG	1 cut(s)	1427
MspA1I	CMGCKG	1 cut(s)	793
MteI	GCGCNGCGC	1 cut(s)	755
MunI	CAATTG	1 cut(s)	1521
Mva1269I	GAATGC	1 cut(s)	1141
MvaI	CCWGG	3 cut(s)	28, 1308, 1475
NaeI	GCCGGC	1 cut(s)	510
NarI	GGCGCC	1 cut(s)	561
NciI	CCSGG	7 cut(s)	240, 293, 294, 356, 449, 460, 995
NdeII	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
NgoMIV	GCCGGC	1 cut(s)	508
NheI	GCTAGC	1 cut(s)	896
NlaIII	CATG	6 cut(s)	136, 568, 845, 1106, 1215, 1426
NlaIV	GGNNCC	8 cut(s)	360, 562, 1011, 1012, 1056, 1093, 1315, 1472
NmeAIII	GCCGAG	4 cut(s)	224, 524, 1014, 1577
NmuCI	GTSAC	2 cut(s)	552, 1288
NsiI	ATGCAT	1 cut(s)	1213
PaeR7I	CTCGAG	1 cut(s)	249
PauI	GCGCGC	2 cut(s)	80, 851
PciSI	GCTCTTC	2 cut(s)	683, 1480
PcsI	WCGNNNNNNNCGW	8 cut(s)	308, 336, 345, 477, 483, 521, 783, 1011
PctI	GAATGC	1 cut(s)	1141
PdiI	GCCGGC	1 cut(s)	510
PdmI	GAANNNNTTC	4 cut(s)	371, 530, 1172, 1278
PfeI	GAWTC	3 cut(s)	212, 313, 1325
PflMI	CCANNNNNTGG	1 cut(s)	27
PfoI	TCCNGGA	1 cut(s)	1473
PinAI	ACCGGT	3 cut(s)	489, 528, 1038
PkrI	GCNGC	7 cut(s)	79, 747, 756, 768, 792, 1250, 1492
PleI	GAGTC	5 cut(s)	260, 278, 511, 611, 1522
PluTI	GGCGCC	1 cut(s)	564
PmaCI	CACGTG	2 cut(s)	709, 964
PmlI	CACGTG	2 cut(s)	709, 964
PpsI	GAGTC	5 cut(s)	260, 278, 511, 611, 1522
Ppu21I	YACGTR	2 cut(s)	709, 964
PpuMI	RGGWCCY	1 cut(s)	583
Psp124BI	GAGCTC	1 cut(s)	347
Psp5II	RGGWCCY	1 cut(s)	583
Psp6I	CCWGG	3 cut(s)	26, 1306, 1473
PspCI	CACGTG	2 cut(s)	709, 964
PspFI	CCCAGC	1 cut(s)	1371
PspGI	CCWGG	3 cut(s)	26, 1306, 1473
PspN4I	GGNNCC	8 cut(s)	360, 562, 1011, 1012, 1056, 1093, 1315, 1472
PspOMI	GGGCCC	1 cut(s)	1010
PspPI	GGNCC	7 cut(s)	104, 295, 583, 1010, 1011, 1115, 1313
PspPPI	RGGWCCY	1 cut(s)	583
PspXI	VCTCGAGB	1 cut(s)	249
PsrI	GAACNNNNNNTAC	2 cut(s)	518, 550
PteI	GCGCGC	2 cut(s)	80, 851
RsaI	GTAC	4 cut(s)	797, 881, 1093, 1222
RsaNI	GTAC	4 cut(s)	796, 880, 1092, 1221
RseI	CAYNNNNRTG	1 cut(s)	1427
SacI	GAGCTC	1 cut(s)	347
SalI	GTCGAC	2 cut(s)	175, 514
SapI	GCTCTTC	2 cut(s)	683, 1480
SaqAI	TTAA	1 cut(s)	1557
SatI	GCNGC	7 cut(s)	78, 746, 755, 767, 791, 1249, 1491
Sau3AI	GATC	5 cut(s)	609, 783, 1002, 1098, 1384
Sau96I	GGNCC	7 cut(s)	104, 295, 583, 1010, 1011, 1115, 1313
SchI	GAGTC	5 cut(s)	261, 278, 511, 611, 1523
SduI	GDGCHC	5 cut(s)	34, 347, 945, 995, 1014
SfaNI	GCATC	3 cut(s)	1198, 1376, 1447
SfoI	GGCGCC	1 cut(s)	562
Sfr274I	CTCGAG	1 cut(s)	249
SinI	GGWCC	2 cut(s)	583, 1313
SlaI	CTCGAG	1 cut(s)	249
SmaI	CCCGGG	1 cut(s)	294
SmiMI	CAYNNNNRTG	1 cut(s)	1427
SmlI	CTYRAG	2 cut(s)	170, 249
SmoI	CTYRAG	2 cut(s)	170, 249
Sse9I	AATT	6 cut(s)	68, 716, 1133, 1177, 1231, 1521
SspDI	GGCGCC	1 cut(s)	560
SspMI	CTAG	2 cut(s)	897, 1583
SstI	GAGCTC	1 cut(s)	347
TaaI	ACNGT	6 cut(s)	118, 418, 1096, 1162, 1268, 1429
TaiI	ACGT	9 cut(s)	540, 554, 576, 711, 740, 807, 849, 966, 1392
TasI	AATT	6 cut(s)	68, 716, 1133, 1177, 1231, 1521
TauI	GCSGC	3 cut(s)	80, 748, 757
TfiI	GAWTC	3 cut(s)	212, 313, 1325
Tru1I	TTAA	1 cut(s)	1557
Tru9I	TTAA	1 cut(s)	1557
TscAI	CASTG	4 cut(s)	911, 1165, 1305, 1434
TseFI	GTSAC	2 cut(s)	552, 1288
TseI	GCWGC	4 cut(s)	766, 790, 1248, 1490
Tsp45I	GTSAC	2 cut(s)	552, 1288
TspDTI	ATGAA	4 cut(s)	61, 268, 380, 728
TspGWI	ACGGA	2 cut(s)	217, 493
TspMI	CCCGGG	1 cut(s)	292
TspRI	CASTG	4 cut(s)	911, 1165, 1305, 1434
Van91I	CCANNNNNTGG	1 cut(s)	27
VpaK11BI	GGWCC	2 cut(s)	583, 1313
XagI	CCTNNNNNAGG	1 cut(s)	1300
XapI	RAATTY	1 cut(s)	716
XhoI	CTCGAG	1 cut(s)	249
XmaI	CCCGGG	1 cut(s)	292
XmiI	GTMKAC	3 cut(s)	176, 453, 515
XmnI	GAANNNNTTC	4 cut(s)	371, 530, 1172, 1278
XspI	CTAG	2 cut(s)	897, 1583
ZraI	GACGTC	1 cut(s)	805
Zsp2I	ATGCAT	1 cut(s)	1213

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.