pycom03g10540

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0028505
Physical Location & Seq
Forward (+)
9725126 .. 9728122
2997 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1728 bp
ATGAAAATCTTGCAACCTAGTCATACACTGGTTACTGTACAGGTCTCAGTGCAGAAACGTACTCCAAGGATGCTATCTCGTAGTATAGATGCCACACAGTTGAAGGATCCTCATTCACTTGAAGTTCATCCGAGAGGTGCCAATTCTCCCACTGACCCATCACACATTACCCCTTCAACAGTTCAGGTGCAGACTGATTCAAGGCATCCAGTAGCTTCGGATCAAGAAAGGGAGTGCTCCTCAGTTCCTACGCAAGTATTTAACAAGCCACAGAAACAGCAACAACAATTGCACTATTCAGAGTCATCACTTATTATGCATGGAAATGCTGGTGGTACTTTTCACCCGTATTCAGGGACAAGGGTCAATACTTCTGCATTGCCTGTCAAACAGCAACCTTTTGATGCACAACCAAGGCAAAGTCTACAACATCAAAGCATGGGTTCTGCTCAGTCAGGTGGGGAAGCACATGGAATGAACATCATGAGTATGTCCAAAATGGGGAGTCAAAATTCTATGAATGACCCTAGTAGACTGGAAGGTGGATCTTGTTCTCACTTGAACAATAATGCTACTTTAGAACAGAATCCCGTTCCTTGTAAATCGTCAAATAAAGAGCAGAGTTCCAATCCCTTGTCATCAATGGCATATGTCAAACAGGGATCATTTGATCAGACTATTAGGCAGCAACACAACCTCTCATTGCCTGATTCACTGGGATTGCCTTCTGTTTCTGCTGCACTACTTGAACAGGGAAATGCATCATCTGGAATTCCAATGAATGAAGTCTTAGAGAAGGCTTCTAGATTAGGCGCTTCAACATCTGTAAGCATTGCTCCTTCATCATCTAAAAGCACATTGCCCCCAATTTCTGTTTCTCCTTCCATCATAATGCAAGTCAATCCTAGTGTCTCGTTGGGCCCTCAGGTAACATCTGGAACCTCGCCTTCTGGGGCTCGTAAGAAAACCCTTCCAAAAAAACGTTCTCTTGGCCAAAACAAGCCACTCGAAACACTTGGTTCATCACCGTCGCAATCAAGTAAGAAGCAAAAAGTATCTGGGACCTTTGTGGATATCGCAGAACTGAATGATGTCACTTCTGTCAGTGGAGTCAATCTCGAGGAAGAGGAAGAGCTTCTACTTTCAGGGCCCAAGAAGCATAGTAAAGCTTCAGAAGCCTCTGGAAAATTTGTGCAAGAAGAAGAGGAAGGGCTGATTTTGCAGAAGGCTCCATTGCAGAAAAAGATAGGGGAAATCATGGTCAAATGCGGTTTGAAAAGTGTACGACACGATGTAGAGCGATGCTTGTCAATGTGTGTTGAGGAAAGGATGAGGAGGCTTATAAATAATTTGATCCGACTGTCAAAGCAGTGGGTTGATGCTGAAAAATCAAGACACCACACTATTACTACTTCTGATGTTCGCCAACAAATTATTGATCTCAATCAGAAGCCTAGGGAAGAACGGAAAGAGAAGCCGGCTGAGGCAGCAAAGCTCTGGAAGCTTAATGAAACAAACAAAAAGGACAATGACAAAATGAGGACAGCAGCAGCAAATGTTGCTGCCCTTGCGGCTGTTGGGGGAGATGACATGTTCTCAAAATGGAAACTTATGGCACAAGCACGGAAACAACGTGATGGTGAGATTGATGCAGCATCTAGAGCCCAGCCAGTTCAAGGTGTAAAAAAGGCAAACAAATTGAATCAGCAAAGGGGATTTATTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000428 GO:0001650 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0005730 GO:0005911 GO:0006139 GO:0006351 GO:0006352 GO:0006355 GO:0006357 GO:0006366 GO:0006367 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0016070 GO:0016591 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0023051 GO:0030054 GO:0030880 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044452 GO:0044464 GO:0044798 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0051059 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0055029 GO:0055044 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901796 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 ko05016 ko05168 map03022 map05016 map05168
Pfam Domains
Protein Families
RST TAF4

Protein Analysis

576

Amino Acids

62.62

Weight (kDa)

9.54

Isoelectric Point (pI)

59.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAF4 PF05236 362 - 563 3.7e-48 Transcription initiation factor TFIID component TAF4 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0028505)

Species Orthologous Gene IDs
malus_domestica MD03G1150900.v1.1
pyrus_communis pycom03g10540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1343
AccB1I GGYRCC 1 cut(s) 137
AccI GTMKAC 2 cut(s) 424, 532
AciI CCGC 2 cut(s) 1269, 1571
AclI AACGTT 1 cut(s) 982
AclWI GGATC 6 cut(s) 101, 114, 228, 553, 670, 1348
AcoI YGGCCR 1 cut(s) 991
AcsI RAATTY 3 cut(s) 511, 771, 1187
AcuI CTGAAG 1 cut(s) 1155
AfaI GTAC 4 cut(s) 39, 61, 337, 1284
AfiI CCNNNNNNNGG 3 cut(s) 353, 501, 1676
AflIII ACRYGT 1 cut(s) 1590
AjuI GAANNNNNNNTTGG 4 cut(s) 859, 891, 967, 999
AluBI AGCT 5 cut(s) 215, 1135, 1169, 1495, 1504
AluI AGCT 5 cut(s) 215, 1135, 1169, 1495, 1504
Alw21I GWGCWC 1 cut(s) 239
Alw26I GTCTC 2 cut(s) 49, 916
AlwI GGATC 6 cut(s) 101, 114, 228, 553, 670, 1348
Ama87I CYCGRG 1 cut(s) 1118
AoxI GGCC 3 cut(s) 919, 991, 1148
ApaI GGGCCC 2 cut(s) 923, 1152
ApeKI GCWGC 7 cut(s) 685, 737, 1487, 1547, 1550, 1562, 1652
ApoI RAATTY 3 cut(s) 511, 771, 1187
Asp700I GAANNNNTTC 1 cut(s) 1134
AspA2I CCTAGG 1 cut(s) 1454
AspLEI GCGC 1 cut(s) 815
AspS9I GGNCC 5 cut(s) 919, 920, 1062, 1148, 1149
AsuHPI GGTGA 3 cut(s) 335, 1017, 1652
AvaI CYCGRG 1 cut(s) 1118
AvaII GGWCC 1 cut(s) 1062
AvrII CCTAGG 1 cut(s) 1454
AxyI CCTNAGG 1 cut(s) 924
BaeGI GKGCMC 2 cut(s) 923, 1152
BalI TGGCCA 1 cut(s) 993
BamHI GGATCC 1 cut(s) 106
BanI GGYRCC 1 cut(s) 137
BanII GRGCYC 4 cut(s) 923, 958, 1152, 1666
BarI GAAGNNNNNNTAC 2 cut(s) 1122, 1154
Bbv12I GWGCWC 1 cut(s) 239
BbvCI CCTCAGC 1 cut(s) 1482
BbvI GCAGC 7 cut(s) 697, 724, 1499, 1549, 1559, 1562, 1664
BccI CCATC 3 cut(s) 166, 893, 1631
BclI TGATCA 1 cut(s) 670
BcoDI GTCTC 2 cut(s) 49, 916
BfaI CTAG 6 cut(s) 18, 528, 804, 906, 1455, 1659
BfoI RGCGCY 1 cut(s) 816
BglI GCCNNNNNGGC 1 cut(s) 1571
BisI GCNGC 8 cut(s) 686, 738, 1488, 1548, 1551, 1563, 1572, 1653
BlnI CCTAGG 1 cut(s) 1454
BlsI GCNGC 8 cut(s) 687, 739, 1489, 1549, 1552, 1564, 1573, 1654
Bme18I GGWCC 1 cut(s) 1062
BmeT110I CYCGRG 1 cut(s) 1118
BmgT120I GGNCC 5 cut(s) 919, 920, 1062, 1148, 1149
BmiI GGNNCC 7 cut(s) 108, 139, 921, 940, 1063, 1150, 1230
BmrI ACTGGG 1 cut(s) 725
BmsI GCATC 9 cut(s) 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664
BmuI ACTGGG 1 cut(s) 725
BoxI GACNNNNGTC 1 cut(s) 362
BplI GAGNNNNNCTC 4 cut(s) 224, 256, 1101, 1133
Bpu10I CCTNAGC 1 cut(s) 1482
BsaBI GATNNNNATC 1 cut(s) 1443
BsaI GGTCTC 1 cut(s) 49
BsaJI CCNNGG 3 cut(s) 65, 413, 1454
Bsc4I CCNNNNNNNGG 3 cut(s) 353, 501, 1676
Bse118I RCCGGY 1 cut(s) 1477
Bse1I ACTGG 5 cut(s) 33, 209, 540, 720, 1670
Bse21I CCTNAGG 1 cut(s) 924
Bse3DI GCAATG 5 cut(s) 377, 701, 831, 857, 1232
Bse8I GATNNNNATC 1 cut(s) 1443
BseDI CCNNGG 3 cut(s) 65, 413, 1454
BseGI GGATG 4 cut(s) 75, 127, 205, 1335
BseJI GATNNNNATC 1 cut(s) 1443
BseLI CCNNNNNNNGG 3 cut(s) 353, 501, 1676
BseMI GCAATG 5 cut(s) 377, 701, 831, 857, 1232
BseMII CTCAG 5 cut(s) 60, 255, 464, 938, 1473
BseNI ACTGG 5 cut(s) 33, 209, 540, 720, 1670
BseRI GAGGAG 2 cut(s) 229, 1348
BseSI GKGCMC 2 cut(s) 923, 1152
BseXI GCAGC 7 cut(s) 697, 724, 1499, 1549, 1559, 1562, 1664
BseYI CCCAGC 1 cut(s) 1665
BsgI GTGCAG 3 cut(s) 71, 209, 723
BshFI GGCC 3 cut(s) 921, 993, 1150
BshNI GGYRCC 1 cut(s) 137
BsiHKAI GWGCWC 1 cut(s) 239
BsiHKCI CYCGRG 1 cut(s) 1118
BsiSI CCGG 1 cut(s) 1478
BslFI GGGAC 2 cut(s) 370, 1075
BslI CCNNNNNNNGG 3 cut(s) 353, 501, 1676
BsmAI GTCTC 2 cut(s) 49, 916
BsmFI GGGAC 2 cut(s) 370, 1075
BsnI GGCC 3 cut(s) 921, 993, 1150
Bso31I GGTCTC 1 cut(s) 49
BsoBI CYCGRG 1 cut(s) 1118
Bsp120I GGGCCC 2 cut(s) 919, 1148
Bsp1286I GDGCHC 5 cut(s) 239, 923, 958, 1152, 1666
Bsp1407I TGTACA 1 cut(s) 37
Bsp143I GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
BspACI CCGC 2 cut(s) 1269, 1571
BspANI GGCC 3 cut(s) 921, 993, 1150
BspCNI CTCAG 5 cut(s) 59, 254, 463, 937, 1474
BspHI TCATGA 1 cut(s) 483
BspLI GGNNCC 7 cut(s) 108, 139, 921, 940, 1063, 1150, 1230
BspPI GGATC 6 cut(s) 101, 114, 228, 553, 670, 1348
BspQI GCTCTTC 1 cut(s) 1125
BspT107I GGYRCC 1 cut(s) 137
BspTNI GGTCTC 1 cut(s) 49
BsrDI GCAATG 5 cut(s) 377, 701, 831, 857, 1232
BsrFI RCCGGY 1 cut(s) 1477
BsrGI TGTACA 1 cut(s) 37
BsrI ACTGG 5 cut(s) 33, 209, 540, 720, 1670
BssAI RCCGGY 1 cut(s) 1477
BssECI CCNNGG 3 cut(s) 65, 413, 1454
BssMI GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
BssT1I CCWWGG 3 cut(s) 65, 413, 1454
Bst4CI ACNGT 5 cut(s) 37, 99, 181, 1029, 1362
Bst6I CTCTTC 3 cut(s) 1119, 1125, 1197
BstAPI GCANNNNNTGC 1 cut(s) 1559
BstAUI TGTACA 1 cut(s) 37
BstC8I GCNNGC 1 cut(s) 1479
BstDEI CTNAG 6 cut(s) 46, 241, 450, 790, 924, 1482
BstF5I GGATG 4 cut(s) 75, 127, 205, 1335
BstH2I RGCGCY 1 cut(s) 816
BstHHI GCGC 1 cut(s) 815
BstKTI GATC 7 cut(s) 109, 223, 548, 665, 673, 1356, 1441
BstMAI GTCTC 2 cut(s) 49, 916
BstMBI GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
BstMWI GCNNNNNNNGC 9 cut(s) 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661
BstNSI RCATGY 1 cut(s) 1594
BstPAI GACNNNNGTC 1 cut(s) 362
BstSLI GKGCMC 2 cut(s) 923, 1152
BstV1I GCAGC 7 cut(s) 697, 724, 1499, 1549, 1559, 1562, 1664
BstX2I RGATCY 2 cut(s) 106, 545
BstYI RGATCY 2 cut(s) 106, 545
Bsu36I CCTNAGG 1 cut(s) 924
BsuRI GGCC 3 cut(s) 921, 993, 1150
BtgZI GCGATG 1 cut(s) 1315
BtsCI GGATG 4 cut(s) 75, 127, 205, 1335
BtsI GCAGTG 1 cut(s) 1376
BtsIMutI CAGTG 6 cut(s) 26, 54, 150, 713, 1111, 1376
Cac8I GCNNGC 1 cut(s) 1479
CciI TCATGA 1 cut(s) 483
CfoI GCGC 1 cut(s) 815
Cfr10I RCCGGY 1 cut(s) 1477
Cfr13I GGNCC 5 cut(s) 919, 920, 1062, 1148, 1149
Csp6I GTAC 4 cut(s) 38, 60, 336, 1283
CviAII CATG 6 cut(s) 320, 439, 470, 484, 1258, 1591
CviQI GTAC 4 cut(s) 38, 60, 336, 1283
DdeI CTNAG 6 cut(s) 46, 241, 450, 790, 924, 1482
DpnI GATC 7 cut(s) 108, 222, 547, 664, 672, 1355, 1440
DpnII GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
EaeI YGGCCR 1 cut(s) 991
Eam1104I CTCTTC 3 cut(s) 1119, 1125, 1197
EarI CTCTTC 3 cut(s) 1119, 1125, 1197
Eco130I CCWWGG 3 cut(s) 65, 413, 1454
Eco24I GRGCYC 4 cut(s) 923, 958, 1152, 1666
Eco31I GGTCTC 1 cut(s) 49
Eco32I GATATC 1 cut(s) 1075
Eco47I GGWCC 1 cut(s) 1062
Eco57I CTGAAG 1 cut(s) 1155
Eco81I CCTNAGG 1 cut(s) 924
Eco88I CYCGRG 1 cut(s) 1118
EcoO109I RGGNCCY 3 cut(s) 920, 1062, 1148
EcoRI GAATTC 1 cut(s) 771
EcoRV GATATC 1 cut(s) 1075
EcoT14I CCWWGG 3 cut(s) 65, 413, 1454
EcoT22I ATGCAT 2 cut(s) 321, 763
EcoT38I GRGCYC 4 cut(s) 923, 958, 1152, 1666
ErhI CCWWGG 3 cut(s) 65, 413, 1454
FaeI CATG 6 cut(s) 323, 442, 473, 487, 1261, 1594
FaqI GGGAC 2 cut(s) 370, 1075
FatI CATG 6 cut(s) 319, 438, 469, 483, 1257, 1590
FauNDI CATATG 1 cut(s) 649
FbaI TGATCA 1 cut(s) 670
FblI GTMKAC 2 cut(s) 424, 532
Fnu4HI GCNGC 8 cut(s) 686, 738, 1488, 1548, 1551, 1563, 1572, 1653
FokI GGATG 4 cut(s) 82, 114, 192, 1342
FriOI GRGCYC 4 cut(s) 923, 958, 1152, 1666
Fsp4HI GCNGC 8 cut(s) 686, 738, 1488, 1548, 1551, 1563, 1572, 1653
FspBI CTAG 6 cut(s) 18, 528, 804, 906, 1455, 1659
GlaI GCGC 1 cut(s) 814
GluI GCNGC 8 cut(s) 686, 738, 1488, 1548, 1551, 1563, 1572, 1653
GsaI CCCAGC 1 cut(s) 1669
HaeII RGCGCY 1 cut(s) 816
HaeIII GGCC 3 cut(s) 921, 993, 1150
HapII CCGG 1 cut(s) 1478
HhaI GCGC 1 cut(s) 815
Hin1II CATG 6 cut(s) 323, 442, 473, 487, 1261, 1594
Hin6I GCGC 1 cut(s) 813
HinP1I GCGC 1 cut(s) 813
HindIII AAGCTT 2 cut(s) 1167, 1502
HinfI GANTC 7 cut(s) 197, 302, 505, 586, 710, 1110, 1702
HpaII CCGG 1 cut(s) 1478
HphI GGTGA 3 cut(s) 335, 1017, 1652
Hpy166II GTNNAC 3 cut(s) 425, 533, 1283
Hpy188I TCNGA 8 cut(s) 132, 220, 301, 675, 1174, 1358, 1417, 1449
Hpy8I GTNNAC 3 cut(s) 425, 533, 1283
Hpy99I CGWCG 1 cut(s) 1033
HpyCH4III ACNGT 5 cut(s) 37, 99, 181, 1029, 1362
HpyCH4IV ACGT 3 cut(s) 58, 982, 1633
HpyF10VI GCNNNNNNNGC 9 cut(s) 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661
HpyF3I CTNAG 6 cut(s) 46, 241, 450, 790, 924, 1482
HpySE526I ACGT 3 cut(s) 58, 982, 1633
Hsp92II CATG 6 cut(s) 323, 442, 473, 487, 1261, 1594
HspAI GCGC 1 cut(s) 813
KroI GCCGGC 1 cut(s) 1477
KroNI GCCGGC 1 cut(s) 1479
Ksp22I TGATCA 1 cut(s) 670
Kzo9I GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
LguI GCTCTTC 1 cut(s) 1125
LmnI GCTCC 3 cut(s) 242, 841, 1234
Lsp1109I GCAGC 7 cut(s) 697, 724, 1499, 1549, 1559, 1562, 1664
LweI GCATC 9 cut(s) 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664
MaeI CTAG 6 cut(s) 18, 528, 804, 906, 1455, 1659
MaeII ACGT 3 cut(s) 58, 982, 1633
MaeIII GTNAC 3 cut(s) 31, 928, 1093
MalI GATC 7 cut(s) 108, 222, 547, 664, 672, 1355, 1440
MboI GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
MboII GAAGA 5 cut(s) 1136, 1142, 1211, 1214, 1472
MfeI CAATTG 1 cut(s) 287
MflI RGATCY 2 cut(s) 106, 545
MhlI GDGCHC 5 cut(s) 239, 923, 958, 1152, 1666
MlsI TGGCCA 1 cut(s) 993
MluCI AATT 9 cut(s) 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697
MluNI TGGCCA 1 cut(s) 993
MlyI GAGTC 3 cut(s) 311, 514, 1119
MmeI TCCRAC 1 cut(s) 1381
Mox20I TGGCCA 1 cut(s) 993
Mph1103I ATGCAT 2 cut(s) 321, 763
MroNI GCCGGC 1 cut(s) 1477
MroXI GAANNNNTTC 1 cut(s) 1134
MscI TGGCCA 1 cut(s) 993
MseI TTAA 2 cut(s) 261, 1506
MslI CAYNNNNRTG 3 cut(s) 324, 488, 890
Msp20I TGGCCA 1 cut(s) 993
MspI CCGG 1 cut(s) 1478
MunI CAATTG 1 cut(s) 287
MwoI GCNNNNNNNGC 9 cut(s) 1156, 1175, 1219, 1487, 1501, 1559, 1568, 1571, 1661
NaeI GCCGGC 1 cut(s) 1479
NdeI CATATG 1 cut(s) 649
NdeII GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
NgoMIV GCCGGC 1 cut(s) 1477
NlaIII CATG 6 cut(s) 323, 442, 473, 487, 1261, 1594
NlaIV GGNNCC 7 cut(s) 108, 139, 921, 940, 1063, 1150, 1230
NmuCI GTSAC 1 cut(s) 1093
NsiI ATGCAT 2 cut(s) 321, 763
NspI RCATGY 1 cut(s) 1594
PaeR7I CTCGAG 1 cut(s) 1118
PagI TCATGA 1 cut(s) 483
PciI ACATGT 1 cut(s) 1590
PciSI GCTCTTC 1 cut(s) 1125
PcsI WCGNNNNNNNCGW 1 cut(s) 1630
PdiI GCCGGC 1 cut(s) 1479
PdmI GAANNNNTTC 1 cut(s) 1134
PfeI GAWTC 4 cut(s) 197, 586, 710, 1702
PkrI GCNGC 8 cut(s) 687, 739, 1489, 1549, 1552, 1564, 1573, 1654
PleI GAGTC 3 cut(s) 310, 513, 1118
PpsI GAGTC 3 cut(s) 310, 513, 1118
PpuMI RGGWCCY 1 cut(s) 1062
PscI ACATGT 1 cut(s) 1590
PshAI GACNNNNGTC 1 cut(s) 362
PsiI TTATAA 1 cut(s) 1343
Psp1406I AACGTT 1 cut(s) 982
Psp5II RGGWCCY 1 cut(s) 1062
PspFI CCCAGC 1 cut(s) 1665
PspN4I GGNNCC 7 cut(s) 108, 139, 921, 940, 1063, 1150, 1230
PspOMI GGGCCC 2 cut(s) 919, 1148
PspPI GGNCC 5 cut(s) 919, 920, 1062, 1148, 1149
PspPPI RGGWCCY 1 cut(s) 1062
PsuI RGATCY 2 cut(s) 106, 545
RsaI GTAC 4 cut(s) 39, 61, 337, 1284
RsaNI GTAC 4 cut(s) 38, 60, 336, 1283
RseI CAYNNNNRTG 3 cut(s) 324, 488, 890
SapI GCTCTTC 1 cut(s) 1125
SaqAI TTAA 2 cut(s) 261, 1506
SatI GCNGC 8 cut(s) 686, 738, 1488, 1548, 1551, 1563, 1572, 1653
Sau3AI GATC 7 cut(s) 106, 220, 545, 662, 670, 1353, 1438
Sau96I GGNCC 5 cut(s) 919, 920, 1062, 1148, 1149
SchI GAGTC 3 cut(s) 311, 514, 1119
SduI GDGCHC 5 cut(s) 239, 923, 958, 1152, 1666
SfaNI GCATC 9 cut(s) 60, 79, 214, 394, 770, 1292, 1369, 1639, 1664
Sfr274I CTCGAG 1 cut(s) 1118
SinI GGWCC 1 cut(s) 1062
SlaI CTCGAG 1 cut(s) 1118
SmiMI CAYNNNNRTG 3 cut(s) 324, 488, 890
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
Sse9I AATT 9 cut(s) 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697
SsiI CCGC 2 cut(s) 1269, 1571
SspMI CTAG 6 cut(s) 18, 528, 804, 906, 1455, 1659
StyI CCWWGG 3 cut(s) 65, 413, 1454
TaaI ACNGT 5 cut(s) 37, 99, 181, 1029, 1362
TaiI ACGT 3 cut(s) 61, 985, 1636
TaqI TCGA 2 cut(s) 1008, 1119
TasI AATT 9 cut(s) 142, 287, 511, 771, 867, 1187, 1348, 1431, 1697
TatI WGTACW 1 cut(s) 37
TauI GCSGC 1 cut(s) 1574
TfiI GAWTC 4 cut(s) 197, 586, 710, 1702
Tru1I TTAA 2 cut(s) 261, 1506
Tru9I TTAA 2 cut(s) 261, 1506
TscAI CASTG 6 cut(s) 33, 54, 157, 720, 1111, 1376
TseFI GTSAC 1 cut(s) 1093
TseI GCWGC 7 cut(s) 685, 737, 1487, 1547, 1550, 1562, 1652
Tsp45I GTSAC 1 cut(s) 1093
TspDTI ATGAA 9 cut(s) 17, 116, 491, 533, 794, 798, 831, 1011, 1524
TspGWI ACGGA 2 cut(s) 1480, 1639
TspRI CASTG 6 cut(s) 33, 54, 157, 720, 1111, 1376
VpaK11BI GGWCC 1 cut(s) 1062
XapI RAATTY 3 cut(s) 511, 771, 1187
XbaI TCTAGA 2 cut(s) 803, 1658
XceI RCATGY 1 cut(s) 1594
XhoI CTCGAG 1 cut(s) 1118
XmaJI CCTAGG 1 cut(s) 1454
XmiI GTMKAC 2 cut(s) 424, 532
XmnI GAANNNNTTC 1 cut(s) 1134
XspI CTAG 6 cut(s) 18, 528, 804, 906, 1455, 1659
Zsp2I ATGCAT 2 cut(s) 321, 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.