Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G62040 |
| fragaria_vesca | FvH4_3g22920 |
| prunus_persica | Prupe.4G215300_v2.0.a1 |
| pyrus_communis | pycom03g15090 |
| rosa_laevigata | RLG00000033967 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 34 |
| AccIII | TCCGGA | 1 cut(s) | 195 |
| AciI | CCGC | 3 cut(s) | 32, 43, 333 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 87 |
| AgsI | TTSAA | 1 cut(s) | 19 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 31 |
| AluBI | AGCT | 4 cut(s) | 12, 22, 56, 211 |
| AluI | AGCT | 4 cut(s) | 12, 22, 56, 211 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 56 |
| Aor13HI | TCCGGA | 1 cut(s) | 195 |
| AoxI | GGCC | 2 cut(s) | 3, 225 |
| ApeKI | GCWGC | 2 cut(s) | 56, 266 |
| ApoI | RAATTY | 1 cut(s) | 87 |
| AspS9I | GGNCC | 1 cut(s) | 193 |
| AsuHPI | GGTGA | 1 cut(s) | 347 |
| AvaII | GGWCC | 1 cut(s) | 193 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbvI | GCAGC | 2 cut(s) | 43, 253 |
| BccI | CCATC | 1 cut(s) | 302 |
| BciVI | GTATCC | 1 cut(s) | 87 |
| BfmI | CTRYAG | 1 cut(s) | 328 |
| BfuI | GTATCC | 1 cut(s) | 87 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 224 |
| BisI | GCNGC | 3 cut(s) | 44, 57, 267 |
| BlsI | GCNGC | 3 cut(s) | 45, 58, 268 |
| Bme18I | GGWCC | 1 cut(s) | 193 |
| BmgT120I | GGNCC | 1 cut(s) | 193 |
| BmiI | GGNNCC | 1 cut(s) | 156 |
| BsaWI | WCCGGW | 2 cut(s) | 91, 195 |
| BseAI | TCCGGA | 1 cut(s) | 195 |
| BseMII | CTCAG | 1 cut(s) | 226 |
| BseXI | GCAGC | 2 cut(s) | 43, 253 |
| BshFI | GGCC | 2 cut(s) | 5, 227 |
| BsiSI | CCGG | 2 cut(s) | 92, 196 |
| BsnI | GGCC | 2 cut(s) | 5, 227 |
| Bsp13I | TCCGGA | 1 cut(s) | 195 |
| Bsp143I | GATC | 1 cut(s) | 63 |
| BspACI | CCGC | 3 cut(s) | 32, 43, 333 |
| BspANI | GGCC | 2 cut(s) | 5, 227 |
| BspCNI | CTCAG | 1 cut(s) | 225 |
| BspEI | TCCGGA | 1 cut(s) | 195 |
| BspLI | GGNNCC | 1 cut(s) | 156 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BsrBI | CCGCTC | 1 cut(s) | 34 |
| BssMI | GATC | 1 cut(s) | 63 |
| Bst4CI | ACNGT | 1 cut(s) | 172 |
| Bst6I | CTCTTC | 1 cut(s) | 194 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 56 |
| BstC8I | GCNNGC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 212 |
| BstKTI | GATC | 1 cut(s) | 66 |
| BstMBI | GATC | 1 cut(s) | 63 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 40, 56, 224 |
| BstSFI | CTRYAG | 1 cut(s) | 328 |
| BstV1I | GCAGC | 2 cut(s) | 43, 253 |
| BsuI | GTATCC | 1 cut(s) | 87 |
| BsuRI | GGCC | 2 cut(s) | 5, 227 |
| BtsI | GCAGTG | 1 cut(s) | 261 |
| BtsIMutI | CAGTG | 2 cut(s) | 220, 261 |
| Cac8I | GCNNGC | 1 cut(s) | 48 |
| CaiI | CAGNNNCTG | 1 cut(s) | 56 |
| Cfr13I | GGNCC | 1 cut(s) | 193 |
| CviAII | CATG | 1 cut(s) | 322 |
| CviJI | RGCY | 7 cut(s) | 5, 12, 22, 56, 110, 211, 227 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 12, 22, 56, 110, 211, 227 |
| DdeI | CTNAG | 1 cut(s) | 212 |
| DpnI | GATC | 1 cut(s) | 65 |
| DpnII | GATC | 1 cut(s) | 63 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 194 |
| EarI | CTCTTC | 1 cut(s) | 194 |
| Eco47I | GGWCC | 1 cut(s) | 193 |
| EcoRI | GAATTC | 1 cut(s) | 87 |
| FaeI | CATG | 1 cut(s) | 325 |
| FaiI | YATR | 7 cut(s) | 125, 189, 230, 236, 272, 288, 323 |
| FatI | CATG | 1 cut(s) | 321 |
| FauI | CCCGC | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 3 cut(s) | 44, 57, 267 |
| Fsp4HI | GCNGC | 3 cut(s) | 44, 57, 267 |
| GluI | GCNGC | 3 cut(s) | 44, 57, 267 |
| HaeIII | GGCC | 2 cut(s) | 5, 227 |
| HapII | CCGG | 2 cut(s) | 92, 196 |
| Hin1II | CATG | 1 cut(s) | 325 |
| HpaII | CCGG | 2 cut(s) | 92, 196 |
| HphI | GGTGA | 1 cut(s) | 347 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 196 |
| HpyAV | CCTTC | 3 cut(s) | 25, 100, 217 |
| HpyCH4III | ACNGT | 1 cut(s) | 172 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 40, 56, 224 |
| HpyF3I | CTNAG | 1 cut(s) | 212 |
| Hsp92II | CATG | 1 cut(s) | 325 |
| Kpn2I | TCCGGA | 1 cut(s) | 195 |
| Kzo9I | GATC | 1 cut(s) | 63 |
| LmnI | GCTCC | 1 cut(s) | 17 |
| LpnPI | CCDG | 8 cut(s) | 32, 52, 93, 105, 137, 141, 171, 209 |
| Lsp1109I | GCAGC | 2 cut(s) | 43, 253 |
| MaeIII | GTNAC | 1 cut(s) | 119 |
| MalI | GATC | 1 cut(s) | 65 |
| MbiI | CCGCTC | 1 cut(s) | 34 |
| MboI | GATC | 1 cut(s) | 63 |
| MboII | GAAGA | 3 cut(s) | 211, 256, 317 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 87 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 3 cut(s) | 195, 283, 326 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MroI | TCCGGA | 1 cut(s) | 195 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 2 cut(s) | 207, 352 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 333 |
| MspI | CCGG | 2 cut(s) | 92, 196 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 40, 56, 224 |
| NdeII | GATC | 1 cut(s) | 63 |
| NlaIII | CATG | 1 cut(s) | 325 |
| NlaIV | GGNNCC | 1 cut(s) | 156 |
| NmeAIII | GCCGAG | 1 cut(s) | 244 |
| NmuCI | GTSAC | 1 cut(s) | 119 |
| PkrI | GCNGC | 3 cut(s) | 45, 58, 268 |
| PspN4I | GGNNCC | 1 cut(s) | 156 |
| PspPI | GGNCC | 1 cut(s) | 193 |
| PstNI | CAGNNNCTG | 1 cut(s) | 56 |
| SaqAI | TTAA | 2 cut(s) | 207, 352 |
| SatI | GCNGC | 3 cut(s) | 44, 57, 267 |
| Sau3AI | GATC | 1 cut(s) | 63 |
| Sau96I | GGNCC | 1 cut(s) | 193 |
| SetI | ASST | 5 cut(s) | 14, 24, 58, 213, 329 |
| SfcI | CTRYAG | 1 cut(s) | 328 |
| SinI | GGWCC | 1 cut(s) | 193 |
| Sse9I | AATT | 1 cut(s) | 87 |
| SsiI | CCGC | 3 cut(s) | 32, 43, 333 |
| TaaI | ACNGT | 1 cut(s) | 172 |
| TaqI | TCGA | 2 cut(s) | 24, 36 |
| TasI | AATT | 1 cut(s) | 87 |
| TauI | GCSGC | 1 cut(s) | 46 |
| Tru1I | TTAA | 2 cut(s) | 207, 352 |
| Tru9I | TTAA | 2 cut(s) | 207, 352 |
| TscAI | CASTG | 2 cut(s) | 220, 268 |
| TseFI | GTSAC | 1 cut(s) | 119 |
| TseI | GCWGC | 2 cut(s) | 56, 266 |
| Tsp45I | GTSAC | 1 cut(s) | 119 |
| TspRI | CASTG | 2 cut(s) | 220, 268 |
| VpaK11BI | GGWCC | 1 cut(s) | 193 |
| XapI | RAATTY | 1 cut(s) | 87 |