pycom03g22360
ERF Family

Belongs to the GST superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
22515079 .. 22515357
279 bp
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UTR
Exon/CDS
Intron
pycom03g22360.1

Sequence Viewer

Length: 279 bp
ATGGCAATTATAGCATTGGGGTGTGAGGTGGAGGGCCAAAAGTTCGACCCGGCGGCCTCAAAACTGACCTTTGAGCTAGCTATAAAGCCTATGCTTAAAATGACACCAGATGCGGCAGTTGTGGAGGAATATGAAGCCAAGTTGGCTGTGGTTCTGGATGTATATGAGATTCGTCTGGCTCAGTCGAAATACTTGGCAGGCGAAAGCTTCATGGATCGATCTTCACCACCTTCCCACCATAAATTACTTGATGGGAACACAATCGAAGAAGCTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

93

Amino Acids

10.08

Weight (kDa)

4.77

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029249)

Species Orthologous Gene IDs
pyrus_communis pycom03g22360
rosa_laevigata RLG00000011958

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 53, 113
AclWI GGATC 1 cut(s) 222
AluBI AGCT 4 cut(s) 76, 80, 207, 272
AluI AGCT 4 cut(s) 76, 80, 207, 272
AlwI GGATC 1 cut(s) 222
AoxI GGCC 2 cut(s) 34, 54
AspS9I GGNCC 1 cut(s) 34
AsuC2I CCSGG 1 cut(s) 50
AsuHPI GGTGA 1 cut(s) 216
AsuNHI GCTAGC 1 cut(s) 76
BccI CCATC 1 cut(s) 245
BcnI CCSGG 1 cut(s) 50
BfaI CTAG 1 cut(s) 77
BglI GCCNNNNNGGC 1 cut(s) 143
BisI GCNGC 2 cut(s) 54, 114
BlsI GCNGC 2 cut(s) 55, 115
Bme1390I CCNGG 1 cut(s) 50
BmgT120I GGNCC 1 cut(s) 34
BmrFI CCNGG 1 cut(s) 50
BmsI GCATC 1 cut(s) 100
BmtI GCTAGC 1 cut(s) 80
BpuMI CCSGG 1 cut(s) 50
Bsa29I ATCGAT 1 cut(s) 217
BseCI ATCGAT 1 cut(s) 217
BseGI GGATG 1 cut(s) 163
BseMII CTCAG 1 cut(s) 194
BshFI GGCC 2 cut(s) 36, 56
BshVI ATCGAT 1 cut(s) 217
BsiSI CCGG 1 cut(s) 50
BsnI GGCC 2 cut(s) 36, 56
Bsp143I GATC 2 cut(s) 214, 218
BspACI CCGC 2 cut(s) 53, 113
BspANI GGCC 2 cut(s) 36, 56
BspCNI CTCAG 1 cut(s) 193
BspDI ATCGAT 1 cut(s) 217
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 1 cut(s) 222
BssMI GATC 2 cut(s) 214, 218
BstC8I GCNNGC 2 cut(s) 78, 199
BstDEI CTNAG 1 cut(s) 180
BstF5I GGATG 1 cut(s) 163
BstKTI GATC 2 cut(s) 217, 221
BstMBI GATC 2 cut(s) 214, 218
BstMWI GCNNNNNNNGC 2 cut(s) 11, 143
BstSCI CCNGG 1 cut(s) 48
Bsu15I ATCGAT 1 cut(s) 217
BsuRI GGCC 2 cut(s) 36, 56
BsuTUI ATCGAT 1 cut(s) 217
BtsCI GGATG 1 cut(s) 163
Cac8I GCNNGC 2 cut(s) 78, 199
Cfr13I GGNCC 1 cut(s) 34
ClaI ATCGAT 1 cut(s) 217
CviAII CATG 1 cut(s) 211
DdeI CTNAG 1 cut(s) 180
DpnI GATC 2 cut(s) 216, 220
DpnII GATC 2 cut(s) 214, 218
FaeI CATG 1 cut(s) 214
FaiI YATR 8 cut(s) 11, 83, 92, 132, 163, 165, 212, 240
FatI CATG 1 cut(s) 210
Fnu4HI GCNGC 2 cut(s) 54, 114
FokI GGATG 1 cut(s) 170
Fsp4HI GCNGC 2 cut(s) 54, 114
FspBI CTAG 1 cut(s) 77
GluI GCNGC 2 cut(s) 54, 114
HaeIII GGCC 2 cut(s) 36, 56
HapII CCGG 1 cut(s) 50
Hin1II CATG 1 cut(s) 214
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 1 cut(s) 169
HpaII CCGG 1 cut(s) 50
HphI GGTGA 1 cut(s) 216
Hpy188III TCNNGA 1 cut(s) 155
HpyAV CCTTC 1 cut(s) 240
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 143
HpyF3I CTNAG 1 cut(s) 180
Hsp92II CATG 1 cut(s) 214
Kzo9I GATC 2 cut(s) 214, 218
LpnPI CCDG 5 cut(s) 63, 120, 140, 161, 183
LweI GCATC 1 cut(s) 100
MaeI CTAG 1 cut(s) 77
MalI GATC 2 cut(s) 216, 220
MboI GATC 2 cut(s) 214, 218
MboII GAAGA 2 cut(s) 213, 278
MluCI AATT 2 cut(s) 6, 242
MnlI CCTC 4 cut(s) 19, 25, 67, 118
MseI TTAA 1 cut(s) 96
MslI CAYNNNNRTG 1 cut(s) 19
MspI CCGG 1 cut(s) 50
MspR9I CCNGG 1 cut(s) 50
MwoI GCNNNNNNNGC 2 cut(s) 11, 143
NciI CCSGG 1 cut(s) 50
NdeII GATC 2 cut(s) 214, 218
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 1 cut(s) 214
PfeI GAWTC 1 cut(s) 169
PkrI GCNGC 2 cut(s) 55, 115
PspPI GGNCC 1 cut(s) 34
RseI CAYNNNNRTG 1 cut(s) 19
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 2 cut(s) 54, 114
Sau3AI GATC 2 cut(s) 214, 218
Sau96I GGNCC 1 cut(s) 34
ScrFI CCNGG 1 cut(s) 50
SetI ASST 7 cut(s) 30, 71, 78, 82, 209, 232, 274
SfaNI GCATC 1 cut(s) 100
SmiMI CAYNNNNRTG 1 cut(s) 19
Sse9I AATT 2 cut(s) 6, 242
SsiI CCGC 2 cut(s) 53, 113
SspMI CTAG 1 cut(s) 77
StyD4I CCNGG 1 cut(s) 48
TaqI TCGA 4 cut(s) 45, 185, 217, 264
TasI AATT 2 cut(s) 6, 242
TauI GCSGC 2 cut(s) 56, 116
TfiI GAWTC 1 cut(s) 169
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TspDTI ATGAA 2 cut(s) 147, 199
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XspI CTAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.