phosphatidylinositol 4-phosphate 5-kinase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g08290 pycom12g10680 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 396 |
| AccI | GTMKAC | 2 cut(s) | 509, 645 |
| AciI | CCGC | 7 cut(s) | 14, 32, 409, 1263, 1482, 1603, 1708 |
| AclWI | GGATC | 1 cut(s) | 886 |
| AcoI | YGGCCR | 3 cut(s) | 15, 1339, 1696 |
| AcsI | RAATTY | 6 cut(s) | 300, 335, 925, 1050, 1429, 1661 |
| AcuI | CTGAAG | 4 cut(s) | 237, 297, 876, 1605 |
| AcvI | CACGTG | 1 cut(s) | 651 |
| AfaI | GTAC | 1 cut(s) | 1640 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 203, 375, 960, 1694 |
| AflIII | ACRYGT | 2 cut(s) | 648, 1728 |
| AgsI | TTSAA | 8 cut(s) | 415, 467, 605, 1322, 1447, 1692, 1771, 1808 |
| AjnI | CCWGG | 3 cut(s) | 499, 1180, 1424 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 289, 321, 981, 1013 |
| AluBI | AGCT | 9 cut(s) | 163, 612, 1019, 1099, 1116, 1159, 1212, 1237, 1744 |
| AluI | AGCT | 9 cut(s) | 163, 612, 1019, 1099, 1116, 1159, 1212, 1237, 1744 |
| Alw26I | GTCTC | 6 cut(s) | 72, 265, 277, 1037, 1171, 1548 |
| AlwI | GGATC | 1 cut(s) | 886 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 320, 1348 |
| AoxI | GGCC | 6 cut(s) | 7, 15, 497, 1339, 1696, 1881 |
| ApeKI | GCWGC | 5 cut(s) | 249, 729, 1234, 1353, 1457 |
| ApoI | RAATTY | 6 cut(s) | 300, 335, 925, 1050, 1429, 1661 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 167, 199 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 949 |
| AspS9I | GGNCC | 6 cut(s) | 8, 194, 366, 497, 585, 684 |
| AsuC2I | CCSGG | 1 cut(s) | 1515 |
| AsuHPI | GGTGA | 3 cut(s) | 275, 1183, 1196 |
| AsuII | TTCGAA | 1 cut(s) | 987 |
| AsuNHI | GCTAGC | 1 cut(s) | 1159 |
| AvaII | GGWCC | 4 cut(s) | 194, 366, 585, 684 |
| BalI | TGGCCA | 2 cut(s) | 1341, 1698 |
| BanII | GRGCYC | 1 cut(s) | 786 |
| BbrPI | CACGTG | 1 cut(s) | 651 |
| BbsI | GAAGAC | 2 cut(s) | 96, 303 |
| BbvCI | CCTCAGC | 1 cut(s) | 1020 |
| BbvI | GCAGC | 5 cut(s) | 236, 741, 1246, 1340, 1444 |
| BccI | CCATC | 5 cut(s) | 239, 399, 653, 695, 1714 |
| BceAI | ACGGC | 1 cut(s) | 1160 |
| BciT130I | CCWGG | 3 cut(s) | 501, 1182, 1426 |
| BclI | TGATCA | 1 cut(s) | 1089 |
| BcnI | CCSGG | 1 cut(s) | 1515 |
| BcoDI | GTCTC | 6 cut(s) | 72, 265, 277, 1037, 1171, 1548 |
| BfaI | CTAG | 6 cut(s) | 450, 536, 1100, 1131, 1160, 1614 |
| BfmI | CTRYAG | 1 cut(s) | 872 |
| BisI | GCNGC | 8 cut(s) | 15, 33, 250, 730, 1235, 1263, 1354, 1458 |
| BlsI | GCNGC | 8 cut(s) | 16, 34, 251, 731, 1236, 1264, 1355, 1459 |
| Bme1390I | CCNGG | 4 cut(s) | 501, 1182, 1426, 1515 |
| Bme18I | GGWCC | 4 cut(s) | 194, 366, 585, 684 |
| BmgT120I | GGNCC | 6 cut(s) | 8, 194, 366, 497, 585, 684 |
| BmiI | GGNNCC | 3 cut(s) | 196, 367, 686 |
| BmrFI | CCNGG | 4 cut(s) | 501, 1182, 1426, 1515 |
| BmsI | GCATC | 7 cut(s) | 448, 468, 618, 675, 1444, 1480, 1596 |
| BmtI | GCTAGC | 1 cut(s) | 1163 |
| BpiI | GAAGAC | 2 cut(s) | 96, 303 |
| BpmI | CTGGAG | 1 cut(s) | 995 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1020, 1574 |
| Bpu14I | TTCGAA | 1 cut(s) | 987 |
| BpuEI | CTTGAG | 2 cut(s) | 1530, 1814 |
| BpuMI | CCSGG | 1 cut(s) | 1515 |
| Bsa29I | ATCGAT | 1 cut(s) | 1905 |
| BsaAI | YACGTR | 2 cut(s) | 513, 651 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1808, 1901 |
| BsaI | GGTCTC | 1 cut(s) | 1171 |
| BsaJI | CCNNGG | 3 cut(s) | 688, 954, 1783 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 203, 375, 960, 1694 |
| Bse1I | ACTGG | 1 cut(s) | 740 |
| Bse3DI | GCAATG | 2 cut(s) | 1288, 1392 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1808, 1901 |
| BseBI | CCWGG | 3 cut(s) | 501, 1182, 1426 |
| BseCI | ATCGAT | 1 cut(s) | 1905 |
| BseDI | CCNNGG | 3 cut(s) | 688, 954, 1783 |
| BseGI | GGATG | 5 cut(s) | 210, 285, 483, 1611, 1778 |
| BseJI | GATNNNNATC | 2 cut(s) | 1808, 1901 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 203, 375, 960, 1694 |
| BseMI | GCAATG | 2 cut(s) | 1288, 1392 |
| BseMII | CTCAG | 6 cut(s) | 1011, 1032, 1240, 1510, 1588, 1907 |
| BseNI | ACTGG | 1 cut(s) | 740 |
| BseXI | GCAGC | 5 cut(s) | 236, 741, 1246, 1340, 1444 |
| BseYI | CCCAGC | 1 cut(s) | 1237 |
| BsgI | GTGCAG | 1 cut(s) | 1720 |
| Bsh1285I | CGRYCG | 1 cut(s) | 47 |
| BshFI | GGCC | 6 cut(s) | 9, 17, 499, 1341, 1698, 1883 |
| BshVI | ATCGAT | 1 cut(s) | 1905 |
| BsiEI | CGRYCG | 1 cut(s) | 47 |
| BsiSI | CCGG | 1 cut(s) | 1515 |
| BsiWI | CGTACG | 1 cut(s) | 1638 |
| BslFI | GGGAC | 2 cut(s) | 379, 608 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 203, 375, 960, 1694 |
| BsmAI | GTCTC | 6 cut(s) | 72, 265, 277, 1037, 1171, 1548 |
| BsmBI | CGTCTC | 1 cut(s) | 265 |
| BsmFI | GGGAC | 2 cut(s) | 379, 608 |
| BsnI | GGCC | 6 cut(s) | 9, 17, 499, 1341, 1698, 1883 |
| Bso31I | GGTCTC | 1 cut(s) | 1171 |
| Bsp119I | TTCGAA | 1 cut(s) | 987 |
| Bsp1286I | GDGCHC | 1 cut(s) | 786 |
| Bsp143I | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| BspACI | CCGC | 7 cut(s) | 14, 32, 409, 1263, 1482, 1603, 1708 |
| BspANI | GGCC | 6 cut(s) | 9, 17, 499, 1341, 1698, 1883 |
| BspCNI | CTCAG | 6 cut(s) | 1012, 1033, 1239, 1509, 1587, 1906 |
| BspDI | ATCGAT | 1 cut(s) | 1905 |
| BspHI | TCATGA | 1 cut(s) | 1560 |
| BspLI | GGNNCC | 3 cut(s) | 196, 367, 686 |
| BspMAI | CTGCAG | 1 cut(s) | 876 |
| BspOI | GCTAGC | 1 cut(s) | 1163 |
| BspPI | GGATC | 1 cut(s) | 886 |
| BspT104I | TTCGAA | 1 cut(s) | 987 |
| BspTNI | GGTCTC | 1 cut(s) | 1171 |
| BsrDI | GCAATG | 2 cut(s) | 1288, 1392 |
| BsrI | ACTGG | 1 cut(s) | 740 |
| BssECI | CCNNGG | 3 cut(s) | 688, 954, 1783 |
| BssMI | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| BssNAI | GTATAC | 2 cut(s) | 510, 646 |
| BssT1I | CCWWGG | 2 cut(s) | 954, 1783 |
| Bst1107I | GTATAC | 2 cut(s) | 510, 646 |
| Bst2UI | CCWGG | 3 cut(s) | 501, 1182, 1426 |
| Bst4CI | ACNGT | 2 cut(s) | 1350, 1362 |
| Bst6I | CTCTTC | 1 cut(s) | 1169 |
| BstBAI | YACGTR | 2 cut(s) | 513, 651 |
| BstBI | TTCGAA | 1 cut(s) | 987 |
| BstC8I | GCNNGC | 2 cut(s) | 872, 1161 |
| BstDEI | CTNAG | 8 cut(s) | 1020, 1041, 1060, 1226, 1496, 1574, 1745, 1893 |
| BstDSI | CCRYGG | 1 cut(s) | 688 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 958 |
| BstF5I | GGATG | 5 cut(s) | 210, 285, 483, 1611, 1778 |
| BstKTI | GATC | 8 cut(s) | 47, 881, 1009, 1092, 1194, 1219, 1905, 1909 |
| BstMAI | GTCTC | 6 cut(s) | 72, 265, 277, 1037, 1171, 1548 |
| BstMBI | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| BstMCI | CGRYCG | 1 cut(s) | 47 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 38, 1231, 1262 |
| BstNI | CCWGG | 3 cut(s) | 501, 1182, 1426 |
| BstNSI | RCATGY | 1 cut(s) | 1732 |
| BstSCI | CCNGG | 4 cut(s) | 499, 1180, 1424, 1513 |
| BstSFI | CTRYAG | 1 cut(s) | 872 |
| BstV1I | GCAGC | 5 cut(s) | 236, 741, 1246, 1340, 1444 |
| BstV2I | GAAGAC | 2 cut(s) | 96, 303 |
| BstX2I | RGATCY | 1 cut(s) | 878 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 830 |
| BstYI | RGATCY | 1 cut(s) | 878 |
| BstZ17I | GTATAC | 2 cut(s) | 510, 646 |
| Bsu15I | ATCGAT | 1 cut(s) | 1905 |
| BsuRI | GGCC | 6 cut(s) | 9, 17, 499, 1341, 1698, 1883 |
| BsuTUI | ATCGAT | 1 cut(s) | 1905 |
| BtgI | CCRYGG | 1 cut(s) | 688 |
| BtgZI | GCGATG | 2 cut(s) | 418, 1256 |
| BtsCI | GGATG | 5 cut(s) | 210, 285, 483, 1611, 1778 |
| Cac8I | GCNNGC | 2 cut(s) | 872, 1161 |
| CaiI | CAGNNNCTG | 2 cut(s) | 320, 1348 |
| CciI | TCATGA | 1 cut(s) | 1560 |
| Cfr13I | GGNCC | 6 cut(s) | 8, 194, 366, 497, 585, 684 |
| ClaI | ATCGAT | 1 cut(s) | 1905 |
| CseI | GACGC | 1 cut(s) | 1579 |
| CsiI | ACCWGGT | 1 cut(s) | 1180 |
| Csp6I | GTAC | 1 cut(s) | 1639 |
| CviQI | GTAC | 1 cut(s) | 1639 |
| DdeI | CTNAG | 8 cut(s) | 1020, 1041, 1060, 1226, 1496, 1574, 1745, 1893 |
| DpnI | GATC | 8 cut(s) | 46, 880, 1008, 1091, 1193, 1218, 1904, 1908 |
| DpnII | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| DraI | TTTAAA | 2 cut(s) | 696, 1845 |
| EaeI | YGGCCR | 3 cut(s) | 15, 1339, 1696 |
| Eam1104I | CTCTTC | 1 cut(s) | 1169 |
| EarI | CTCTTC | 1 cut(s) | 1169 |
| Eco130I | CCWWGG | 2 cut(s) | 954, 1783 |
| Eco147I | AGGCCT | 1 cut(s) | 1883 |
| Eco24I | GRGCYC | 1 cut(s) | 786 |
| Eco31I | GGTCTC | 1 cut(s) | 1171 |
| Eco32I | GATATC | 1 cut(s) | 437 |
| Eco47I | GGWCC | 4 cut(s) | 194, 366, 585, 684 |
| Eco57I | CTGAAG | 4 cut(s) | 237, 297, 876, 1605 |
| Eco72I | CACGTG | 1 cut(s) | 651 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 958 |
| EcoO109I | RGGNCCY | 2 cut(s) | 366, 497 |
| EcoRI | GAATTC | 1 cut(s) | 1050 |
| EcoRII | CCWGG | 3 cut(s) | 499, 1180, 1424 |
| EcoRV | GATATC | 1 cut(s) | 437 |
| EcoT14I | CCWWGG | 2 cut(s) | 954, 1783 |
| EcoT22I | ATGCAT | 2 cut(s) | 357, 633 |
| EcoT38I | GRGCYC | 1 cut(s) | 786 |
| ErhI | CCWWGG | 2 cut(s) | 954, 1783 |
| Esp3I | CGTCTC | 1 cut(s) | 265 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1694, 1726 |
| FaqI | GGGAC | 2 cut(s) | 379, 608 |
| FauNDI | CATATG | 1 cut(s) | 232 |
| FbaI | TGATCA | 1 cut(s) | 1089 |
| FblI | GTMKAC | 2 cut(s) | 509, 645 |
| Fnu4HI | GCNGC | 8 cut(s) | 15, 33, 250, 730, 1235, 1263, 1354, 1458 |
| FokI | GGATG | 5 cut(s) | 197, 292, 490, 1618, 1765 |
| FriOI | GRGCYC | 1 cut(s) | 786 |
| Fsp4HI | GCNGC | 8 cut(s) | 15, 33, 250, 730, 1235, 1263, 1354, 1458 |
| FspBI | CTAG | 6 cut(s) | 450, 536, 1100, 1131, 1160, 1614 |
| GluI | GCNGC | 8 cut(s) | 15, 33, 250, 730, 1235, 1263, 1354, 1458 |
| GsaI | CCCAGC | 1 cut(s) | 1241 |
| GsuI | CTGGAG | 1 cut(s) | 995 |
| HaeIII | GGCC | 6 cut(s) | 9, 17, 499, 1341, 1698, 1883 |
| HapII | CCGG | 1 cut(s) | 1515 |
| HgaI | GACGC | 1 cut(s) | 1579 |
| HinfI | GANTC | 9 cut(s) | 98, 153, 182, 415, 596, 970, 1037, 1384, 1891 |
| HpaII | CCGG | 1 cut(s) | 1515 |
| HphI | GGTGA | 3 cut(s) | 275, 1183, 1196 |
| Hpy166II | GTNNAC | 2 cut(s) | 510, 646 |
| Hpy188I | TCNGA | 9 cut(s) | 136, 174, 244, 382, 1042, 1209, 1499, 1585, 1896 |
| Hpy8I | GTNNAC | 2 cut(s) | 510, 646 |
| Hpy99I | CGWCG | 1 cut(s) | 1817 |
| HpyAV | CCTTC | 8 cut(s) | 212, 217, 461, 488, 599, 1128, 1698, 1878 |
| HpyCH4III | ACNGT | 2 cut(s) | 1350, 1362 |
| HpyCH4IV | ACGT | 2 cut(s) | 512, 650 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 38, 1231, 1262 |
| HpyF3I | CTNAG | 8 cut(s) | 1020, 1041, 1060, 1226, 1496, 1574, 1745, 1893 |
| HpySE526I | ACGT | 2 cut(s) | 512, 650 |
| Ksp22I | TGATCA | 1 cut(s) | 1089 |
| Kzo9I | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| LmnI | GCTCC | 3 cut(s) | 160, 931, 1209 |
| Lsp1109I | GCAGC | 5 cut(s) | 236, 741, 1246, 1340, 1444 |
| LweI | GCATC | 7 cut(s) | 448, 468, 618, 675, 1444, 1480, 1596 |
| MabI | ACCWGGT | 1 cut(s) | 1180 |
| MaeI | CTAG | 6 cut(s) | 450, 536, 1100, 1131, 1160, 1614 |
| MaeII | ACGT | 2 cut(s) | 512, 650 |
| MaeIII | GTNAC | 2 cut(s) | 936, 1388 |
| MalI | GATC | 8 cut(s) | 46, 880, 1008, 1091, 1193, 1218, 1904, 1908 |
| MboI | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| MboII | GAAGA | 8 cut(s) | 101, 303, 761, 1113, 1186, 1500, 1589, 1770 |
| MfeI | CAATTG | 1 cut(s) | 1251 |
| MflI | RGATCY | 1 cut(s) | 878 |
| MhlI | GDGCHC | 1 cut(s) | 786 |
| MlsI | TGGCCA | 2 cut(s) | 1341, 1698 |
| MluNI | TGGCCA | 2 cut(s) | 1341, 1698 |
| MlyI | GAGTC | 6 cut(s) | 162, 191, 590, 979, 1393, 1885 |
| MmeI | TCCRAC | 3 cut(s) | 360, 655, 947 |
| Mox20I | TGGCCA | 2 cut(s) | 1341, 1698 |
| Mph1103I | ATGCAT | 2 cut(s) | 357, 633 |
| MroXI | GAANNNNTTC | 1 cut(s) | 949 |
| MscI | TGGCCA | 2 cut(s) | 1341, 1698 |
| MslI | CAYNNNNRTG | 3 cut(s) | 291, 945, 1626 |
| Msp20I | TGGCCA | 2 cut(s) | 1341, 1698 |
| MspA1I | CMGCKG | 2 cut(s) | 1237, 1265 |
| MspI | CCGG | 1 cut(s) | 1515 |
| MspR9I | CCNGG | 4 cut(s) | 501, 1182, 1426, 1515 |
| MunI | CAATTG | 1 cut(s) | 1251 |
| MvaI | CCWGG | 3 cut(s) | 501, 1182, 1426 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 38, 1231, 1262 |
| NciI | CCSGG | 1 cut(s) | 1515 |
| NdeI | CATATG | 1 cut(s) | 232 |
| NdeII | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| NheI | GCTAGC | 1 cut(s) | 1159 |
| NlaIV | GGNNCC | 3 cut(s) | 196, 367, 686 |
| NmuCI | GTSAC | 2 cut(s) | 936, 1388 |
| NsiI | ATGCAT | 2 cut(s) | 357, 633 |
| NspI | RCATGY | 1 cut(s) | 1732 |
| NspV | TTCGAA | 1 cut(s) | 987 |
| PagI | TCATGA | 1 cut(s) | 1560 |
| PceI | AGGCCT | 1 cut(s) | 1883 |
| PciI | ACATGT | 1 cut(s) | 1728 |
| PdmI | GAANNNNTTC | 1 cut(s) | 949 |
| PfeI | GAWTC | 3 cut(s) | 98, 415, 1037 |
| Pfl23II | CGTACG | 1 cut(s) | 1638 |
| PfoI | TCCNGGA | 2 cut(s) | 1424, 1513 |
| PkrI | GCNGC | 8 cut(s) | 16, 34, 251, 731, 1236, 1264, 1355, 1459 |
| Ple19I | CGATCG | 1 cut(s) | 47 |
| PleI | GAGTC | 6 cut(s) | 161, 190, 590, 978, 1392, 1885 |
| PmaCI | CACGTG | 1 cut(s) | 651 |
| PmlI | CACGTG | 1 cut(s) | 651 |
| PpsI | GAGTC | 6 cut(s) | 161, 190, 590, 978, 1392, 1885 |
| Ppu21I | YACGTR | 2 cut(s) | 513, 651 |
| PpuMI | RGGWCCY | 1 cut(s) | 366 |
| PscI | ACATGT | 1 cut(s) | 1728 |
| PsiI | TTATAA | 1 cut(s) | 396 |
| Psp5II | RGGWCCY | 1 cut(s) | 366 |
| Psp6I | CCWGG | 3 cut(s) | 499, 1180, 1424 |
| PspCI | CACGTG | 1 cut(s) | 651 |
| PspFI | CCCAGC | 1 cut(s) | 1237 |
| PspGI | CCWGG | 3 cut(s) | 499, 1180, 1424 |
| PspLI | CGTACG | 1 cut(s) | 1638 |
| PspN4I | GGNNCC | 3 cut(s) | 196, 367, 686 |
| PspPI | GGNCC | 6 cut(s) | 8, 194, 366, 497, 585, 684 |
| PspPPI | RGGWCCY | 1 cut(s) | 366 |
| PstI | CTGCAG | 1 cut(s) | 876 |
| PstNI | CAGNNNCTG | 2 cut(s) | 320, 1348 |
| PsuI | RGATCY | 1 cut(s) | 878 |
| PvuI | CGATCG | 1 cut(s) | 47 |
| PvuII | CAGCTG | 1 cut(s) | 1237 |
| RsaI | GTAC | 1 cut(s) | 1640 |
| RsaNI | GTAC | 1 cut(s) | 1639 |
| RseI | CAYNNNNRTG | 3 cut(s) | 291, 945, 1626 |
| SatI | GCNGC | 8 cut(s) | 15, 33, 250, 730, 1235, 1263, 1354, 1458 |
| Sau3AI | GATC | 8 cut(s) | 44, 878, 1006, 1089, 1191, 1216, 1902, 1906 |
| Sau96I | GGNCC | 6 cut(s) | 8, 194, 366, 497, 585, 684 |
| SbfI | CCTGCAGG | 1 cut(s) | 876 |
| SchI | GAGTC | 6 cut(s) | 162, 191, 590, 979, 1393, 1885 |
| ScrFI | CCNGG | 4 cut(s) | 501, 1182, 1426, 1515 |
| SdaI | CCTGCAGG | 1 cut(s) | 876 |
| SduI | GDGCHC | 1 cut(s) | 786 |
| SexAI | ACCWGGT | 1 cut(s) | 1180 |
| SfaNI | GCATC | 7 cut(s) | 448, 468, 618, 675, 1444, 1480, 1596 |
| SfcI | CTRYAG | 1 cut(s) | 872 |
| SfuI | TTCGAA | 1 cut(s) | 987 |
| SinI | GGWCC | 4 cut(s) | 194, 366, 585, 684 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 291, 945, 1626 |
| SmlI | CTYRAG | 2 cut(s) | 1545, 1829 |
| SmoI | CTYRAG | 2 cut(s) | 1545, 1829 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 876 |
| SseBI | AGGCCT | 1 cut(s) | 1883 |
| SsiI | CCGC | 7 cut(s) | 14, 32, 409, 1263, 1482, 1603, 1708 |
| SspMI | CTAG | 6 cut(s) | 450, 536, 1100, 1131, 1160, 1614 |
| StuI | AGGCCT | 1 cut(s) | 1883 |
| StyD4I | CCNGG | 4 cut(s) | 499, 1180, 1424, 1513 |
| StyI | CCWWGG | 2 cut(s) | 954, 1783 |
| TaaI | ACNGT | 2 cut(s) | 1350, 1362 |
| TaiI | ACGT | 2 cut(s) | 515, 653 |
| TaqI | TCGA | 5 cut(s) | 987, 1756, 1812, 1863, 1905 |
| TauI | GCSGC | 3 cut(s) | 17, 35, 1265 |
| TfiI | GAWTC | 3 cut(s) | 98, 415, 1037 |
| TseFI | GTSAC | 2 cut(s) | 936, 1388 |
| TseI | GCWGC | 5 cut(s) | 249, 729, 1234, 1353, 1457 |
| Tsp45I | GTSAC | 2 cut(s) | 936, 1388 |
| TspDTI | ATGAA | 7 cut(s) | 560, 1113, 1121, 1259, 1549, 1664, 1767 |
| VpaK11BI | GGWCC | 4 cut(s) | 194, 366, 585, 684 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 958 |
| XapI | RAATTY | 6 cut(s) | 300, 335, 925, 1050, 1429, 1661 |
| XbaI | TCTAGA | 1 cut(s) | 1130 |
| XceI | RCATGY | 1 cut(s) | 1732 |
| XmiI | GTMKAC | 2 cut(s) | 509, 645 |
| XmnI | GAANNNNTTC | 1 cut(s) | 949 |
| XspI | CTAG | 6 cut(s) | 450, 536, 1100, 1131, 1160, 1614 |
| Zsp2I | ATGCAT | 2 cut(s) | 357, 633 |