pycom05g30000

Protein TRANSPORT INHIBITOR RESPONSE 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0020351
Physical Location & Seq
Forward (+)
30268376 .. 30270762
2387 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1707 bp
ATGGATTCCCAAAGAAAGAAGGTTCTGGTGCAGGTGCTGAACCTGGTCACGTCACCCAAGGACCGGAGCTCCGTCTCGCTGGTCTGCAAGGACTGGTACGACGTGGAGCGCCACTCTCGCCGCCACGTCTTCATTGGAAACTGCTACTCCGTGTCGCCGGAGATCGTGACCCTGCGGTTTCCCAACATCCGAAGCGTGACCCTGAAGGGGAGGCCGCGGTTCTCGGACTTCAATCTGGTGCCTCCGAATTGGGGCGGCGACGTTCGGCCGTGGCTGGAGGTGTTCGCTGCTGAATACCCGCAGCTCGAGGAGCTGAGGCTGAAGAGGATGACGGTGAGTGATGAGAGCCTTGAGTTCTTGGCTGCTTCTTTTGCTGGGTTCAAAGCTCTGTCGCTGCTCAGCTGTGACGGGTTCAGCACCGATGGCCTTGAAGCCATTGCCACTGACTGCAAGAATTTGACTGAGCTCGACATACAGGAAAACGACATCGATGATAAAAGTGGAGACTGGTTAAGCTGCTTCCCTGAAACCTTCACGTCAATGGAAATACTAAACTTTTCCTGCCTGAATTCCGATGTCGACTTCGATGCTCTTGAGAGTCTTGTAAGTAGGTGCAAATCACTGAAGGTGTTAAAGGTTAATAAAACTGTAACCTTGGACCAACTACGAAGTCTTCTCACCCATGCTCCTCAACTTCTGGAGCTAGGCACCGGCTCGTTCTGGCAAGAGCTCACACCCTCTCAGCATTCAGAACTCGAAAGAGTGTTTAGCAATTGCAAGAATTTATATGCAGTCTCTGGTTTATGGCAAGCAACAGCTCTTTATCTCCCGGTTCTGTATCCTGTCTGTACGAATCTTACTTTCCTGAATTTGAGCTATGCAGCAACTTTGCAAAGTTGGGACCTTGCTAAACTTGTTCCTTATTGTCCACATCTCCGGCGCCTTTGGGTGCTGGACACAGTGGAAGACCAAGGGTTGGAGGCTGTTGGATCAAACTGTCCTTTGCTTGAGGAACTCCGTGTTTTCCCTTCTTCTCCCGATGGAGATGATATTGTTGATGGGGTGACTGGATCTGGGTTTGTTGCTGTGTCCAATGGCTGTCCAAGACTCCGCTATGTCCTCTACTTTTGTTGGCAGATGACTAATGCCGCTGTAGCAACTGTTGCACAAAACTGCCCTGATATAACCCACTTCCGTCTCTGCATAATGACCCCAGCAAAACCAGATCACCTGACGGGTGAGCCTATGGATGAGGCTTTTGGTGCGGTGGTGAAGACTTGCACTAAACTCGAAAGGCTTTCCGTTTCAGGTTTACTGACTGACCTTACATTTGAATACATTGGGAAATATGCCAAGAATTTGGAATACCTTTCAGTAGCCTTCGCTGGAGACAGTGATCAGGGGATGCAGTACGTGATGAATGGTTGCCCCAAGCTCAAGAAACTTGAGATACGGGACTGCCCGTTTGGGGACGCAGCTTTGCTCTCAGGTTTAGAGAAATATGAATCTATGAGGTCACTTTGGATGTCAGCCTGCCTTGTGACAATGAATGCCTGTCGGTCATTGGCAAGTAAGGTGCCGAGGTTGAATGTTGAGGTGATGAAGGATGATGAAATTGGTGATGACAGTCAGGCTGATAAAGTCTATGTTTACCGTTCTATTGCCGGGCCAAGAAAGGATGCCCCGGCTTTTGTTCTCACCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
F-box-like LRR_6

Protein Analysis

569

Amino Acids

63.46

Weight (kDa)

5.07

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box_5 PF18511 6 - 42 5.5e-15 F-box
Transp_inhibit PF18791 61 - 107 8.5e-23 Transport inhibitor response 1 protein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020351)

Species Orthologous Gene IDs
malus_domestica MD05G1325800.v1.1 MD10G1303700.v1.1
prunus_persica Prupe.4G037200_v2.0.a1 Prupe.4G037200_v2.0.a1 Prupe.4G037400_v2.0.a1
pyrus_communis pycom05g30000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 22
Acc36I ACCTGC 1 cut(s) 22
AccB1I GGYRCC 4 cut(s) 238, 707, 939, 1576
AccB7I CCANNNNNTGG 1 cut(s) 976
AccI GTMKAC 1 cut(s) 579
AccII CGCG 1 cut(s) 217
AciI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1265
AclWI GGATC 2 cut(s) 997, 1078
AcoI YGGCCR 1 cut(s) 266
AcsI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
AcuI CTGAAG 3 cut(s) 224, 341, 644
AcyI GRCGYC 1 cut(s) 940
AfaI GTAC 3 cut(s) 98, 850, 1412
AfiI CCNNNNNNNGG 5 cut(s) 63, 207, 251, 976, 1468
AgsI TTSAA 5 cut(s) 232, 382, 431, 1334, 1588
AjiI CACGTC 4 cut(s) 51, 103, 127, 537
AjnI CCWGG 1 cut(s) 42
Alw21I GWGCWC 3 cut(s) 71, 468, 732
Alw26I GTCTC 5 cut(s) 79, 498, 799, 1202, 1383
AlwI GGATC 2 cut(s) 997, 1078
AlwNI CAGNNNCTG 2 cut(s) 37, 797
Ama87I CYCGRG 1 cut(s) 305
AoxI GGCC 4 cut(s) 212, 266, 424, 1667
ApeKI GCWGC 7 cut(s) 287, 301, 362, 394, 516, 881, 1475
ApoI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
ArsI GACNNNNNNTTYG 4 cut(s) 1313, 1345, 1448, 1480
AspLEI GCGC 2 cut(s) 111, 942
AspS9I GGNCC 4 cut(s) 61, 658, 901, 1667
AsuC2I CCSGG 3 cut(s) 830, 1666, 1685
AvaI CYCGRG 1 cut(s) 305
AvaII GGWCC 3 cut(s) 61, 658, 901
BanI GGYRCC 4 cut(s) 238, 707, 939, 1576
BanII GRGCYC 3 cut(s) 71, 468, 732
BbsI GAAGAC 4 cut(s) 121, 665, 972, 1280
Bbv12I GWGCWC 3 cut(s) 71, 468, 732
BbvCI CCTCAGC 1 cut(s) 314
BbvI GCAGC 7 cut(s) 274, 313, 349, 381, 503, 893, 1487
BccI CCATC 3 cut(s) 416, 1034, 1052
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 4 cut(s) 569, 603, 1270, 1304
BciT130I CCWGG 1 cut(s) 44
BciVI GTATCC 1 cut(s) 849
BclI TGATCA 1 cut(s) 1396
BcnI CCSGG 3 cut(s) 830, 1666, 1685
BcoDI GTCTC 5 cut(s) 79, 498, 799, 1202, 1383
BfaI CTAG 1 cut(s) 704
BfmI CTRYAG 1 cut(s) 1152
BfoI RGCGCY 2 cut(s) 112, 943
BfuAI ACCTGC 1 cut(s) 22
BfuI GTATCC 1 cut(s) 849
BlpI GCTNAGC 1 cut(s) 398
Bme1390I CCNGG 4 cut(s) 44, 830, 1666, 1685
Bme18I GGWCC 3 cut(s) 61, 658, 901
BmeT110I CYCGRG 1 cut(s) 305
BmgBI CACGTC 4 cut(s) 51, 103, 127, 537
BmgT120I GGNCC 4 cut(s) 61, 658, 901, 1667
BmiI GGNNCC 5 cut(s) 240, 709, 902, 941, 1578
BmrFI CCNGG 4 cut(s) 44, 830, 1666, 1685
BmsI GCATC 3 cut(s) 577, 1395, 1669
BpiI GAAGAC 4 cut(s) 121, 665, 972, 1280
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 3 cut(s) 296, 719, 1407
Bpu10I CCTNAGC 1 cut(s) 314
Bpu1102I GCTNAGC 1 cut(s) 398
BpuEI CTTGAG 5 cut(s) 371, 614, 1028, 1421, 1466
BpuMI CCSGG 3 cut(s) 830, 1666, 1685
Bsa29I ATCGAT 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 1414
BsaHI GRCGYC 1 cut(s) 940
BsaJI CCNNGG 7 cut(s) 57, 215, 269, 654, 970, 1580, 1683
BsaWI WCCGGW 1 cut(s) 63
BsaXI ACNNNNNCTCC 6 cut(s) 53, 83, 131, 161, 670, 700
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 207, 251, 976, 1468
Bse118I RCCGGY 1 cut(s) 710
Bse1I ACTGG 3 cut(s) 98, 512, 1072
Bse3DI GCAATG 1 cut(s) 435
BseBI CCWGG 1 cut(s) 44
BseCI ATCGAT 1 cut(s) 489
BseDI CCNNGG 7 cut(s) 57, 215, 269, 654, 970, 1580, 1683
BseGI GGATG 7 cut(s) 186, 333, 1255, 1410, 1530, 1612, 1684
BseLI CCNNNNNNNGG 5 cut(s) 63, 207, 251, 976, 1468
BseMI GCAATG 1 cut(s) 435
BseMII CTCAG 5 cut(s) 305, 412, 453, 755, 1500
BseNI ACTGG 3 cut(s) 98, 512, 1072
BseRI GAGGAG 2 cut(s) 323, 678
BseX3I CGGCCG 1 cut(s) 266
BseXI GCAGC 7 cut(s) 274, 313, 349, 381, 503, 893, 1487
BseYI CCCAGC 2 cut(s) 374, 1213
BsgI GTGCAG 1 cut(s) 50
Bsh1236I CGCG 1 cut(s) 217
Bsh1285I CGRYCG 1 cut(s) 269
BshFI GGCC 4 cut(s) 214, 268, 426, 1669
BshNI GGYRCC 4 cut(s) 238, 707, 939, 1576
BshVI ATCGAT 1 cut(s) 489
BsiEI CGRYCG 1 cut(s) 269
BsiHKAI GWGCWC 3 cut(s) 71, 468, 732
BsiHKCI CYCGRG 1 cut(s) 305
BsiSI CCGG 7 cut(s) 64, 158, 711, 830, 937, 1665, 1685
BslFI GGGAC 3 cut(s) 914, 1469, 1484
BslI CCNNNNNNNGG 5 cut(s) 63, 207, 251, 976, 1468
BsmAI GTCTC 5 cut(s) 79, 498, 799, 1202, 1383
BsmBI CGTCTC 2 cut(s) 79, 1202
BsmFI GGGAC 3 cut(s) 914, 1469, 1484
BsmI GAATGC 2 cut(s) 745, 1555
BsnI GGCC 4 cut(s) 214, 268, 426, 1669
BsoBI CYCGRG 1 cut(s) 305
Bsp1286I GDGCHC 3 cut(s) 71, 468, 732
Bsp143I GATC 5 cut(s) 162, 989, 1070, 1225, 1396
Bsp1720I GCTNAGC 1 cut(s) 398
BspACI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1265
BspANI GGCC 4 cut(s) 214, 268, 426, 1669
BspCNI CTCAG 5 cut(s) 306, 411, 454, 754, 1499
BspDI ATCGAT 1 cut(s) 489
BspFNI CGCG 1 cut(s) 217
BspLI GGNNCC 5 cut(s) 240, 709, 902, 941, 1578
BspMI ACCTGC 1 cut(s) 22
BspPI GGATC 2 cut(s) 997, 1078
BspT107I GGYRCC 4 cut(s) 238, 707, 939, 1576
BsrDI GCAATG 1 cut(s) 435
BsrFI RCCGGY 1 cut(s) 710
BsrI ACTGG 3 cut(s) 98, 512, 1072
BssAI RCCGGY 1 cut(s) 710
BssECI CCNNGG 7 cut(s) 57, 215, 269, 654, 970, 1580, 1683
BssMI GATC 5 cut(s) 162, 989, 1070, 1225, 1396
BssNI GRCGYC 1 cut(s) 940
BssT1I CCWWGG 3 cut(s) 57, 654, 970
Bst2UI CCWGG 1 cut(s) 44
Bst4CI ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
Bst6I CTCTTC 1 cut(s) 317
BstACI GRCGYC 1 cut(s) 940
BstAPI GCANNNNNTGC 1 cut(s) 1163
BstBAI YACGTR 1 cut(s) 1414
BstC8I GCNNGC 2 cut(s) 810, 1534
BstDEI CTNAG 5 cut(s) 314, 398, 462, 741, 1486
BstDSI CCRYGG 2 cut(s) 215, 269
BstF5I GGATG 7 cut(s) 186, 333, 1255, 1410, 1530, 1612, 1684
BstFNI CGCG 1 cut(s) 217
BstH2I RGCGCY 2 cut(s) 112, 943
BstHHI GCGC 2 cut(s) 111, 942
BstKTI GATC 5 cut(s) 165, 992, 1073, 1228, 1399
BstMAI GTCTC 5 cut(s) 79, 498, 799, 1202, 1383
BstMBI GATC 5 cut(s) 162, 989, 1070, 1225, 1396
BstMCI CGRYCG 1 cut(s) 269
BstMWI GCNNNNNNNGC 7 cut(s) 117, 310, 371, 423, 1154, 1163, 1262
BstNI CCWGG 1 cut(s) 44
BstSCI CCNGG 4 cut(s) 42, 828, 1664, 1683
BstSFI CTRYAG 1 cut(s) 1152
BstUI CGCG 1 cut(s) 217
BstV1I GCAGC 7 cut(s) 274, 313, 349, 381, 503, 893, 1487
BstV2I GAAGAC 4 cut(s) 121, 665, 972, 1280
BstX2I RGATCY 1 cut(s) 1070
BstXI CCANNNNNNTGG 1 cut(s) 1360
BstYI RGATCY 1 cut(s) 1070
BstZI CGGCCG 1 cut(s) 266
Bsu15I ATCGAT 1 cut(s) 489
BsuI GTATCC 1 cut(s) 849
BsuRI GGCC 4 cut(s) 214, 268, 426, 1669
BsuTUI ATCGAT 1 cut(s) 489
BtgI CCRYGG 2 cut(s) 215, 269
BtrI CACGTC 4 cut(s) 51, 103, 127, 537
BtsCI GGATG 7 cut(s) 186, 333, 1255, 1410, 1530, 1612, 1684
BtsIMutI CAGTG 4 cut(s) 441, 620, 966, 1399
BveI ACCTGC 1 cut(s) 22
Cac8I GCNNGC 2 cut(s) 810, 1534
CaiI CAGNNNCTG 2 cut(s) 37, 797
CfoI GCGC 2 cut(s) 111, 942
Cfr10I RCCGGY 1 cut(s) 710
Cfr13I GGNCC 4 cut(s) 61, 658, 901, 1667
Cfr42I CCGCGG 1 cut(s) 218
ClaI ATCGAT 1 cut(s) 489
CseI GACGC 1 cut(s) 1481
CsiI ACCWGGT 1 cut(s) 42
Csp6I GTAC 3 cut(s) 97, 849, 1411
CviAII CATG 1 cut(s) 683
CviQI GTAC 3 cut(s) 97, 849, 1411
DdeI CTNAG 5 cut(s) 314, 398, 462, 741, 1486
DinI GGCGCC 1 cut(s) 941
DpnI GATC 5 cut(s) 164, 991, 1072, 1227, 1398
DpnII GATC 5 cut(s) 162, 989, 1070, 1225, 1396
EaeI YGGCCR 1 cut(s) 266
EagI CGGCCG 1 cut(s) 266
Eam1104I CTCTTC 1 cut(s) 317
EarI CTCTTC 1 cut(s) 317
Ecl136II GAGCTC 3 cut(s) 69, 466, 730
EclXI CGGCCG 1 cut(s) 266
Eco130I CCWWGG 3 cut(s) 57, 654, 970
Eco24I GRGCYC 3 cut(s) 71, 468, 732
Eco47I GGWCC 3 cut(s) 61, 658, 901
Eco52I CGGCCG 1 cut(s) 266
Eco53kI GAGCTC 3 cut(s) 69, 466, 730
Eco57I CTGAAG 3 cut(s) 224, 341, 644
Eco88I CYCGRG 1 cut(s) 305
EcoICRI GAGCTC 3 cut(s) 69, 466, 730
EcoO109I RGGNCCY 1 cut(s) 901
EcoRI GAATTC 1 cut(s) 568
EcoRII CCWGG 1 cut(s) 42
EcoT14I CCWWGG 3 cut(s) 57, 654, 970
EcoT38I GRGCYC 3 cut(s) 71, 468, 732
EgeI GGCGCC 1 cut(s) 941
EheI GGCGCC 1 cut(s) 941
ErhI CCWWGG 3 cut(s) 57, 654, 970
Esp3I CGTCTC 2 cut(s) 79, 1202
FaeI CATG 1 cut(s) 686
FaqI GGGAC 3 cut(s) 914, 1469, 1484
FatI CATG 1 cut(s) 682
FauI CCCGC 1 cut(s) 306
FbaI TGATCA 1 cut(s) 1396
FblI GTMKAC 1 cut(s) 579
FokI GGATG 7 cut(s) 173, 340, 1262, 1417, 1537, 1619, 1691
FriOI GRGCYC 3 cut(s) 71, 468, 732
FspBI CTAG 1 cut(s) 704
GlaI GCGC 2 cut(s) 110, 941
GsaI CCCAGC 2 cut(s) 378, 1217
GsuI CTGGAG 3 cut(s) 296, 719, 1407
HaeII RGCGCY 2 cut(s) 112, 943
HaeIII GGCC 4 cut(s) 214, 268, 426, 1669
HapII CCGG 7 cut(s) 64, 158, 711, 830, 937, 1665, 1685
HgaI GACGC 1 cut(s) 1481
HhaI GCGC 2 cut(s) 111, 942
Hin1I GRCGYC 1 cut(s) 940
Hin1II CATG 1 cut(s) 686
Hin6I GCGC 2 cut(s) 109, 940
HinP1I GCGC 2 cut(s) 109, 940
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HinfI GANTC 5 cut(s) 5, 598, 853, 1107, 1505
HpaII CCGG 7 cut(s) 64, 158, 711, 830, 937, 1665, 1685
Hpy166II GTNNAC 4 cut(s) 580, 929, 1313, 1651
Hpy188I TCNGA 6 cut(s) 191, 226, 246, 574, 751, 1706
Hpy188III TCNNGA 6 cut(s) 166, 593, 698, 865, 1037, 1438
Hpy8I GTNNAC 4 cut(s) 580, 929, 1313, 1651
Hpy99I CGWCG 2 cut(s) 104, 263
HpyAV CCTTC 7 cut(s) 13, 199, 541, 619, 1038, 1390, 1597
HpyCH4III ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
HpyCH4IV ACGT 6 cut(s) 50, 102, 126, 261, 536, 1413
HpyF10VI GCNNNNNNNGC 7 cut(s) 117, 310, 371, 423, 1154, 1163, 1262
HpyF3I CTNAG 5 cut(s) 314, 398, 462, 741, 1486
HpySE526I ACGT 6 cut(s) 50, 102, 126, 261, 536, 1413
Hsp92I GRCGYC 1 cut(s) 940
Hsp92II CATG 1 cut(s) 686
HspAI GCGC 2 cut(s) 109, 940
KasI GGCGCC 1 cut(s) 939
Ksp22I TGATCA 1 cut(s) 1396
KspI CCGCGG 1 cut(s) 218
Kzo9I GATC 5 cut(s) 162, 989, 1070, 1225, 1396
LmnI GCTCC 6 cut(s) 66, 74, 106, 310, 691, 700
Lsp1109I GCAGC 7 cut(s) 274, 313, 349, 381, 503, 893, 1487
LweI GCATC 3 cut(s) 577, 1395, 1669
MabI ACCWGGT 1 cut(s) 42
MaeI CTAG 1 cut(s) 704
MaeII ACGT 6 cut(s) 50, 102, 126, 261, 536, 1413
MaeIII GTNAC 9 cut(s) 46, 51, 166, 196, 404, 649, 1063, 1515, 1540
MalI GATC 5 cut(s) 164, 991, 1072, 1227, 1398
MboI GATC 5 cut(s) 162, 989, 1070, 1225, 1396
MboII GAAGA 6 cut(s) 121, 334, 665, 977, 1023, 1285
MfeI CAATTG 1 cut(s) 772
MflI RGATCY 1 cut(s) 1070
MhlI GDGCHC 3 cut(s) 71, 468, 732
MluCI AATT 8 cut(s) 247, 454, 568, 772, 781, 868, 1357, 1614
Mly113I GGCGCC 1 cut(s) 940
MlyI GAGTC 2 cut(s) 607, 1101
MmeI TCCRAC 2 cut(s) 957, 967
MseI TTAA 3 cut(s) 512, 632, 639
MslI CAYNNNNRTG 1 cut(s) 539
MspA1I CMGCKG 3 cut(s) 217, 402, 1151
MspI CCGG 7 cut(s) 64, 158, 711, 830, 937, 1665, 1685
MspR9I CCNGG 4 cut(s) 44, 830, 1666, 1685
MunI CAATTG 1 cut(s) 772
Mva1269I GAATGC 2 cut(s) 745, 1555
MvaI CCWGG 1 cut(s) 44
MvnI CGCG 1 cut(s) 217
MwoI GCNNNNNNNGC 7 cut(s) 117, 310, 371, 423, 1154, 1163, 1262
NarI GGCGCC 1 cut(s) 940
NciI CCSGG 3 cut(s) 830, 1666, 1685
NdeII GATC 5 cut(s) 162, 989, 1070, 1225, 1396
NlaIII CATG 1 cut(s) 686
NlaIV GGNNCC 5 cut(s) 240, 709, 902, 941, 1578
NmeAIII GCCGAG 1 cut(s) 1605
NmuCI GTSAC 8 cut(s) 46, 51, 166, 196, 404, 1063, 1515, 1540
PaeR7I CTCGAG 1 cut(s) 305
PaqCI CACCTGC 1 cut(s) 22
PctI GAATGC 2 cut(s) 745, 1555
PfeI GAWTC 3 cut(s) 5, 853, 1505
PflMI CCANNNNNTGG 1 cut(s) 976
PleI GAGTC 2 cut(s) 606, 1101
PluTI GGCGCC 1 cut(s) 943
PpsI GAGTC 2 cut(s) 606, 1101
Ppu21I YACGTR 1 cut(s) 1414
PpuMI RGGWCCY 1 cut(s) 901
Psp124BI GAGCTC 3 cut(s) 71, 468, 732
Psp5II RGGWCCY 1 cut(s) 901
Psp6I CCWGG 1 cut(s) 42
PspFI CCCAGC 2 cut(s) 374, 1213
PspGI CCWGG 1 cut(s) 42
PspN4I GGNNCC 5 cut(s) 240, 709, 902, 941, 1578
PspPI GGNCC 4 cut(s) 61, 658, 901, 1667
PspPPI RGGWCCY 1 cut(s) 901
PspXI VCTCGAGB 1 cut(s) 305
PstNI CAGNNNCTG 2 cut(s) 37, 797
PsuI RGATCY 1 cut(s) 1070
PvuII CAGCTG 1 cut(s) 402
RsaI GTAC 3 cut(s) 98, 850, 1412
RsaNI GTAC 3 cut(s) 97, 849, 1411
RseI CAYNNNNRTG 1 cut(s) 539
SacI GAGCTC 3 cut(s) 71, 468, 732
SacII CCGCGG 1 cut(s) 218
SalI GTCGAC 1 cut(s) 578
SaqAI TTAA 3 cut(s) 512, 632, 639
Sau3AI GATC 5 cut(s) 162, 989, 1070, 1225, 1396
Sau96I GGNCC 4 cut(s) 61, 658, 901, 1667
SchI GAGTC 2 cut(s) 607, 1101
ScrFI CCNGG 4 cut(s) 44, 830, 1666, 1685
SduI GDGCHC 3 cut(s) 71, 468, 732
SexAI ACCWGGT 1 cut(s) 42
SfaNI GCATC 3 cut(s) 577, 1395, 1669
SfcI CTRYAG 1 cut(s) 1152
SfoI GGCGCC 1 cut(s) 941
Sfr274I CTCGAG 1 cut(s) 305
Sfr303I CCGCGG 1 cut(s) 218
SgrBI CCGCGG 1 cut(s) 218
SinI GGWCC 3 cut(s) 61, 658, 901
SlaI CTCGAG 1 cut(s) 305
SmiMI CAYNNNNRTG 1 cut(s) 539
SmlI CTYRAG 6 cut(s) 305, 350, 593, 1007, 1436, 1445
SmoI CTYRAG 6 cut(s) 305, 350, 593, 1007, 1436, 1445
Sse9I AATT 8 cut(s) 247, 454, 568, 772, 781, 868, 1357, 1614
SsiI CCGC 9 cut(s) 121, 175, 215, 217, 255, 299, 1111, 1149, 1265
SspDI GGCGCC 1 cut(s) 939
SspMI CTAG 1 cut(s) 704
SstI GAGCTC 3 cut(s) 71, 468, 732
StyD4I CCNGG 4 cut(s) 42, 828, 1664, 1683
StyI CCWWGG 3 cut(s) 57, 654, 970
TaaI ACNGT 8 cut(s) 334, 649, 961, 998, 1162, 1394, 1628, 1655
TaiI ACGT 6 cut(s) 53, 105, 129, 264, 539, 1416
TaqI TCGA 7 cut(s) 306, 468, 489, 579, 585, 756, 1290
TaqII GACCGA 1 cut(s) 1548
TasI AATT 8 cut(s) 247, 454, 568, 772, 781, 868, 1357, 1614
TauI GCSGC 4 cut(s) 123, 217, 258, 1151
TfiI GAWTC 3 cut(s) 5, 853, 1505
Tru1I TTAA 3 cut(s) 512, 632, 639
Tru9I TTAA 3 cut(s) 512, 632, 639
TscAI CASTG 4 cut(s) 448, 627, 966, 1399
TseFI GTSAC 8 cut(s) 46, 51, 166, 196, 404, 1063, 1515, 1540
TseI GCWGC 7 cut(s) 287, 301, 362, 394, 516, 881, 1475
Tsp45I GTSAC 8 cut(s) 46, 51, 166, 196, 404, 1063, 1515, 1540
TspDTI ATGAA 6 cut(s) 121, 1433, 1518, 1562, 1616, 1626
TspGWI ACGGA 5 cut(s) 61, 139, 1007, 1184, 1291
TspRI CASTG 4 cut(s) 448, 627, 966, 1399
Van91I CCANNNNNTGG 1 cut(s) 976
VpaK11BI GGWCC 3 cut(s) 61, 658, 901
XapI RAATTY 5 cut(s) 454, 568, 781, 868, 1357
XcmI CCANNNNNNNNNTGG 1 cut(s) 131
XhoI CTCGAG 1 cut(s) 305
XmiI GTMKAC 1 cut(s) 579
XspI CTAG 1 cut(s) 704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.