pycom06g00730

Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
666003 .. 670217
4215 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g00730.8

Sequence Viewer

Length: 1506 bp
ATGGATCCTTACAAGCACCGCCCTTCAAGTGCTTTCAACTCCCCGTTCTGGACCACCAATTCCGGTGCTCCAGTTTCGAACAACAACTCTTCTCTGACTGTTGGACCCAGAGGTCCGGTTCTGCTTGAGGACTACCATCTGGTGGAGAAACTCGCCAACTTTGCTAGAGAACGGATCCCAGAGCGTGTCGTCCATGCTAGGGGAGCCAGTGCAAAAGGTTTCTTTGAGGTCACCCATGATATTTCTCACCTTTCATGTGCTGACTTCCTTCGAGCCCCTGGAGTTCAGACACCTGTCATTGTGCGTTTCTCCACTGTTATCCATGAGCGTGGCAGCCCTGAAACCATAAGGGATCCTCGTGGTTTTGCAGTGAAGTTTTACACCAGAGAGGGTAATTTTGACTTGGTGGGAAACAATTTCCCCGTGTTTTTTGTCCGTGATGCAATGCAATTCCCGGACGTGATCCATGCTTTCAAACCGAACCCTAAGTCCCACATCCAAGAGTATTGGAGGGTCCTTGACTTCTTATCTCACCATCCAGAAAGCCTGCTCACGTTCGCCTTCCTATTCGATGACGTGGGAGTTCCACAAGATTACAGGCACATGGAAGGCTTTGGTGTTCACGCCTACACTCTTATCAGCAAGGCCGGGAAGGTACACTACGTGAAGTTTCATTGGAAACCCACTTGTGGAGTCAAGTGTTTGTTGGAGGACGAGGCTATTAAGGTTGGAGGAGCTAATCACAGCCACGCCACCAAGGATCTCTATGACTCCATCGCAGCTGGCAACTTCCCGGAGTGGAAACTTTTTATTCAGACAATGGATCCTAATCCCCGGTCCAGAACGATCGATCATGAAGACAGATTTGACTTTGACCCACTTGATGATACTAAGGTCTGGCCTGAAGATATTCTTCCCCTGCAGCCGGTTGGCCGTTTGGTACTGAATAAGAACGTCGATAACTTCTTCGCAGAGAATGAACAACTTGCTTTCAACCCTGCCCTTGTTGTCCCTGGTGTCTATTATTCAAATGATAAGATGCTCCAAACTCGACTCTTCGCCTATTCTGATACCCAGAGGCACCGTCTTGGCCCCAACTATCTGCAGCTCCCGGTTAATGCTCCCAAGTGTTCTCATCACAACAATCACTATGACGGATTTATGAATTTCATGCACAGAGATGAGGAGATTGACTACTTCCCATCAAGGTTTGATCCTGTTCGCCATGCTGAGACCTTCCCAATTCCTTCTAATATTTTCACTGGAAAGCGTGAGAAGTGCGTCATTGAGAAGGAGAACAACTTCAAGCAACCTGGAGAGAGATACAGATCTTGGGCACCCGACAGGCAAGAGCGATTCCTCCACCGATGGGTTGATGTCCTATCCGAACCTCGTGTCACCTATGAAATTCGCAGCATTTGCAGATCGATCTCATACTGGTCTCAGGCTGACCGATCCTTTGGTCAAAAACTGGCATCTCGTCTTAACGTGAGGCCGAGCATTTGA

Protein Analysis

502

Amino Acids

57.9

Weight (kDa)

7.12

Isoelectric Point (pI)

41.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018285)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 111
AccB1I GGYRCC 2 cut(s) 1080, 1336
AccB7I CCANNNNNTGG 1 cut(s) 142
AciI CCGC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 2 cut(s) 1165, 1407
AcuI CTGAAG 1 cut(s) 924
AdeI CACNNNGTG 1 cut(s) 664
AfaI GTAC 2 cut(s) 657, 942
AfiI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 689, 925, 1369
AgsI TTSAA 6 cut(s) 27, 37, 475, 994, 1029, 1306
AjiI CACGTC 2 cut(s) 460, 577
AjnI CCWGG 3 cut(s) 277, 1012, 1312
AloI GAACNNNNNNTCC 2 cut(s) 473, 505
AluBI AGCT 3 cut(s) 737, 782, 1108
AluI AGCT 3 cut(s) 737, 782, 1108
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 2 cut(s) 1226, 1446
AoxI GGCC 5 cut(s) 645, 899, 931, 1090, 1493
ApeKI GCWGC 5 cut(s) 333, 779, 922, 1105, 1413
ApoI RAATTY 2 cut(s) 1165, 1407
ArsI GACNNNNNNTTYG 6 cut(s) 473, 505, 1380, 1412, 1442, 1474
Asp700I GAANNNNTTC 2 cut(s) 909, 1301
AspS9I GGNCC 6 cut(s) 51, 104, 113, 514, 837, 1091
AsuC2I CCSGG 5 cut(s) 455, 649, 794, 835, 1112
AsuHPI GGTGA 4 cut(s) 223, 239, 524, 1390
AsuII TTCGAA 1 cut(s) 77
AvaII GGWCC 5 cut(s) 51, 104, 113, 514, 837
BaeGI GKGCMC 1 cut(s) 1339
BaeI ACNNNNGTAYC 2 cut(s) 879, 912
BamHI GGATCC 4 cut(s) 4, 174, 352, 823
BanI GGYRCC 2 cut(s) 1080, 1336
BanII GRGCYC 1 cut(s) 277
BarI GAAGNNNNNNTAC 2 cut(s) 644, 676
BauI CACGAG 2 cut(s) 357, 1392
BbsI GAAGAC 1 cut(s) 864
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 5 cut(s) 345, 791, 934, 1117, 1425
BccI CCATC 5 cut(s) 144, 543, 782, 1210, 1362
BceAI ACGGC 1 cut(s) 918
BciT130I CCWGG 3 cut(s) 279, 1014, 1314
BcnI CCSGG 5 cut(s) 455, 649, 794, 835, 1112
BcoDI GTCTC 2 cut(s) 1226, 1446
BfaI CTAG 2 cut(s) 165, 198
BfmI CTRYAG 2 cut(s) 920, 1103
BglII AGATCT 1 cut(s) 1328
BisI GCNGC 5 cut(s) 334, 780, 923, 1106, 1414
BlsI GCNGC 5 cut(s) 335, 781, 924, 1107, 1415
Bme1390I CCNGG 8 cut(s) 279, 455, 649, 794, 835, 1014, 1112, 1314
Bme18I GGWCC 5 cut(s) 51, 104, 113, 514, 837
BmgBI CACGTC 2 cut(s) 460, 577
BmgT120I GGNCC 6 cut(s) 51, 104, 113, 514, 837, 1091
BmrFI CCNGG 8 cut(s) 279, 455, 649, 794, 835, 1014, 1112, 1314
BmsI GCATC 3 cut(s) 430, 1029, 1484
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 864
BpmI CTGGAG 3 cut(s) 54, 300, 1335
Bpu14I TTCGAA 1 cut(s) 77
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 5 cut(s) 455, 649, 794, 835, 1112
Bsa29I ATCGAT 2 cut(s) 849, 1427
BsaAI YACGTR 1 cut(s) 664
BsaBI GATNNNNATC 2 cut(s) 828, 1327
BsaI GGTCTC 2 cut(s) 1226, 1446
BsaJI CCNNGG 4 cut(s) 277, 756, 833, 1012
BsaWI WCCGGW 2 cut(s) 62, 115
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 142, 199, 689, 925, 1369
Bse118I RCCGGY 1 cut(s) 925
Bse1I ACTGG 5 cut(s) 71, 207, 1267, 1442, 1476
Bse3DI GCAATG 1 cut(s) 450
Bse8I GATNNNNATC 2 cut(s) 828, 1327
BseBI CCWGG 3 cut(s) 279, 1014, 1314
BseCI ATCGAT 2 cut(s) 849, 1427
BseDI CCNNGG 4 cut(s) 277, 756, 833, 1012
BseGI GGATG 2 cut(s) 495, 535
BseJI GATNNNNATC 2 cut(s) 828, 1327
BseLI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 689, 925, 1369
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 2 cut(s) 1221, 1457
BseNI ACTGG 5 cut(s) 71, 207, 1267, 1442, 1476
BseRI GAGGAG 2 cut(s) 747, 1199
BseSI GKGCMC 1 cut(s) 1339
BseXI GCAGC 5 cut(s) 345, 791, 934, 1117, 1425
Bsh1285I CGRYCG 1 cut(s) 849
BshFI GGCC 5 cut(s) 647, 901, 933, 1092, 1495
BshNI GGYRCC 2 cut(s) 1080, 1336
BshVI ATCGAT 2 cut(s) 849, 1427
BsiEI CGRYCG 1 cut(s) 849
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 8 cut(s) 63, 116, 455, 648, 794, 835, 926, 1112
BslFI GGGAC 2 cut(s) 475, 995
BslI CCNNNNNNNGG 6 cut(s) 48, 142, 199, 689, 925, 1369
BsmAI GTCTC 2 cut(s) 1226, 1446
BsmFI GGGAC 2 cut(s) 475, 995
BsnI GGCC 5 cut(s) 647, 901, 933, 1092, 1495
Bso31I GGTCTC 2 cut(s) 1226, 1446
Bsp119I TTCGAA 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 70, 277, 1339
BspACI CCGC 1 cut(s) 19
BspANI GGCC 5 cut(s) 647, 901, 933, 1092, 1495
BspCNI CTCAG 2 cut(s) 1222, 1456
BspDI ATCGAT 2 cut(s) 849, 1427
BspHI TCATGA 1 cut(s) 853
BspMAI CTGCAG 2 cut(s) 924, 1107
BspT104I TTCGAA 1 cut(s) 77
BspT107I GGYRCC 2 cut(s) 1080, 1336
BspTNI GGTCTC 2 cut(s) 1226, 1446
BsrDI GCAATG 1 cut(s) 450
BsrFI RCCGGY 1 cut(s) 925
BsrI ACTGG 5 cut(s) 71, 207, 1267, 1442, 1476
BssAI RCCGGY 1 cut(s) 925
BssECI CCNNGG 4 cut(s) 277, 756, 833, 1012
BssSI CACGAG 2 cut(s) 357, 1392
BssT1I CCWWGG 1 cut(s) 756
Bst2BI CACGAG 2 cut(s) 357, 1392
Bst2UI CCWGG 3 cut(s) 279, 1014, 1314
Bst4CI ACNGT 3 cut(s) 100, 316, 1085
Bst6I CTCTTC 2 cut(s) 94, 1061
BstAPI GCANNNNNTGC 1 cut(s) 1419
BstBAI YACGTR 1 cut(s) 664
BstBI TTCGAA 1 cut(s) 77
BstC8I GCNNGC 2 cut(s) 548, 784
BstDEI CTNAG 4 cut(s) 486, 891, 1230, 1443
BstEII GGTNACC 1 cut(s) 229
BstF5I GGATG 2 cut(s) 495, 535
BstMAI GTCTC 2 cut(s) 1226, 1446
BstMCI CGRYCG 1 cut(s) 849
BstMWI GCNNNNNNNGC 3 cut(s) 161, 203, 1419
BstNI CCWGG 3 cut(s) 279, 1014, 1314
BstPAI GACNNNNGTC 1 cut(s) 293
BstPI GGTNACC 1 cut(s) 229
BstSCI CCNGG 8 cut(s) 277, 453, 647, 792, 833, 1012, 1110, 1312
BstSFI CTRYAG 2 cut(s) 920, 1103
BstSLI GKGCMC 1 cut(s) 1339
BstV1I GCAGC 5 cut(s) 345, 791, 934, 1117, 1425
BstV2I GAAGAC 1 cut(s) 864
BstX2I RGATCY 6 cut(s) 4, 174, 352, 760, 823, 1328
BstXI CCANNNNNNTGG 1 cut(s) 329
BstYI RGATCY 6 cut(s) 4, 174, 352, 760, 823, 1328
Bsu15I ATCGAT 2 cut(s) 849, 1427
BsuRI GGCC 5 cut(s) 647, 901, 933, 1092, 1495
BsuTUI ATCGAT 2 cut(s) 849, 1427
BtgZI GCGATG 1 cut(s) 760
BtrI CACGTC 2 cut(s) 460, 577
BtsCI GGATG 2 cut(s) 495, 535
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 4 cut(s) 214, 312, 375, 1260
Cac8I GCNNGC 2 cut(s) 548, 784
CciI TCATGA 1 cut(s) 853
Cfr10I RCCGGY 1 cut(s) 925
Cfr13I GGNCC 6 cut(s) 51, 104, 113, 514, 837, 1091
ClaI ATCGAT 2 cut(s) 849, 1427
CseI GACGC 1 cut(s) 1270
Csp6I GTAC 2 cut(s) 656, 941
CviAII CATG 9 cut(s) 194, 236, 255, 323, 467, 604, 854, 1171, 1226
CviQI GTAC 2 cut(s) 656, 941
DdeI CTNAG 4 cut(s) 486, 891, 1230, 1443
DraIII CACNNNGTG 1 cut(s) 664
DrdI GACNNNNNNGTC 1 cut(s) 111
DseDI GACNNNNNNGTC 1 cut(s) 111
EaeI YGGCCR 1 cut(s) 931
Eam1104I CTCTTC 2 cut(s) 94, 1061
EarI CTCTTC 2 cut(s) 94, 1061
Eco130I CCWWGG 1 cut(s) 756
Eco24I GRGCYC 1 cut(s) 277
Eco31I GGTCTC 2 cut(s) 1226, 1446
Eco47I GGWCC 5 cut(s) 51, 104, 113, 514, 837
Eco57I CTGAAG 1 cut(s) 924
Eco91I GGTNACC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 514
EcoO65I GGTNACC 1 cut(s) 229
EcoRII CCWGG 3 cut(s) 277, 1012, 1312
EcoT14I CCWWGG 1 cut(s) 756
EcoT38I GRGCYC 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 756
FaeI CATG 9 cut(s) 197, 239, 258, 326, 470, 607, 857, 1174, 1229
FalI AAGNNNNNCTT 2 cut(s) 897, 929
FaqI GGGAC 2 cut(s) 475, 995
FatI CATG 9 cut(s) 193, 235, 254, 322, 466, 603, 853, 1170, 1225
Fnu4HI GCNGC 5 cut(s) 334, 780, 923, 1106, 1414
FokI GGATG 2 cut(s) 482, 522
FriOI GRGCYC 1 cut(s) 277
Fsp4HI GCNGC 5 cut(s) 334, 780, 923, 1106, 1414
FspBI CTAG 2 cut(s) 165, 198
GluI GCNGC 5 cut(s) 334, 780, 923, 1106, 1414
GsuI CTGGAG 3 cut(s) 54, 300, 1335
HaeIII GGCC 5 cut(s) 647, 901, 933, 1092, 1495
HapII CCGG 8 cut(s) 63, 116, 455, 648, 794, 835, 926, 1112
HgaI GACGC 1 cut(s) 1270
Hin1II CATG 9 cut(s) 197, 239, 258, 326, 470, 607, 857, 1174, 1229
HinfI GANTC 4 cut(s) 693, 770, 1053, 1356
HpaII CCGG 8 cut(s) 63, 116, 455, 648, 794, 835, 926, 1112
HphI GGTGA 4 cut(s) 223, 239, 524, 1390
Hpy166II GTNNAC 2 cut(s) 622, 658
Hpy188I TCNGA 5 cut(s) 96, 288, 816, 1069, 1387
Hpy188III TCNNGA 4 cut(s) 49, 539, 840, 854
Hpy8I GTNNAC 2 cut(s) 622, 658
Hpy99I CGWCG 1 cut(s) 959
HpyAV CCTTC 8 cut(s) 33, 278, 571, 602, 646, 1246, 1257, 1285
HpyCH4III ACNGT 3 cut(s) 100, 316, 1085
HpyCH4IV ACGT 6 cut(s) 459, 554, 576, 663, 954, 1488
HpyCH4V TGCA 8 cut(s) 212, 368, 443, 448, 922, 1105, 1174, 1422
HpyF10VI GCNNNNNNNGC 3 cut(s) 161, 203, 1419
HpyF3I CTNAG 4 cut(s) 486, 891, 1230, 1443
HpySE526I ACGT 6 cut(s) 459, 554, 576, 663, 954, 1488
Hsp92II CATG 9 cut(s) 197, 239, 258, 326, 470, 607, 857, 1174, 1229
LmnI GCTCC 6 cut(s) 73, 203, 734, 1047, 1113, 1126
Lsp1109I GCAGC 5 cut(s) 345, 791, 934, 1117, 1425
LweI GCATC 3 cut(s) 430, 1029, 1484
MaeI CTAG 2 cut(s) 165, 198
MaeII ACGT 6 cut(s) 459, 554, 576, 663, 954, 1488
MaeIII GTNAC 2 cut(s) 229, 1396
MboII GAAGA 6 cut(s) 81, 869, 905, 917, 958, 1048
MflI RGATCY 6 cut(s) 4, 174, 352, 760, 823, 1328
MhlI GDGCHC 3 cut(s) 70, 277, 1339
MluCI AATT 7 cut(s) 58, 394, 415, 449, 1165, 1242, 1407
MlyI GAGTC 3 cut(s) 702, 764, 1047
MmeI TCCRAC 3 cut(s) 82, 687, 709
MroXI GAANNNNTTC 2 cut(s) 909, 1301
MseI TTAA 3 cut(s) 723, 1116, 1485
MslI CAYNNNNRTG 2 cut(s) 327, 1179
MspA1I CMGCKG 1 cut(s) 782
MspI CCGG 8 cut(s) 63, 116, 455, 648, 794, 835, 926, 1112
MspR9I CCNGG 8 cut(s) 279, 455, 649, 794, 835, 1014, 1112, 1314
MvaI CCWGG 3 cut(s) 279, 1014, 1314
MwoI GCNNNNNNNGC 3 cut(s) 161, 203, 1419
NciI CCSGG 5 cut(s) 455, 649, 794, 835, 1112
NlaIII CATG 9 cut(s) 197, 239, 258, 326, 470, 607, 857, 1174, 1229
NmuCI GTSAC 2 cut(s) 229, 1396
NspV TTCGAA 1 cut(s) 77
PagI TCATGA 1 cut(s) 853
PdmI GAANNNNTTC 2 cut(s) 909, 1301
PfeI GAWTC 1 cut(s) 1356
PflMI CCANNNNNTGG 1 cut(s) 142
PfoI TCCNGGA 2 cut(s) 453, 792
PkrI GCNGC 5 cut(s) 335, 781, 924, 1107, 1415
Ple19I CGATCG 1 cut(s) 849
PleI GAGTC 3 cut(s) 701, 764, 1047
PpsI GAGTC 3 cut(s) 701, 764, 1047
Ppu21I YACGTR 1 cut(s) 664
PpuMI RGGWCCY 1 cut(s) 514
PshAI GACNNNNGTC 1 cut(s) 293
Psp5II RGGWCCY 1 cut(s) 514
Psp6I CCWGG 3 cut(s) 277, 1012, 1312
PspEI GGTNACC 1 cut(s) 229
PspGI CCWGG 3 cut(s) 277, 1012, 1312
PspPI GGNCC 6 cut(s) 51, 104, 113, 514, 837, 1091
PspPPI RGGWCCY 1 cut(s) 514
PstI CTGCAG 2 cut(s) 924, 1107
PsuI RGATCY 6 cut(s) 4, 174, 352, 760, 823, 1328
PvuI CGATCG 1 cut(s) 849
PvuII CAGCTG 1 cut(s) 782
RsaI GTAC 2 cut(s) 657, 942
RsaNI GTAC 2 cut(s) 656, 941
RseI CAYNNNNRTG 2 cut(s) 327, 1179
SaqAI TTAA 3 cut(s) 723, 1116, 1485
SatI GCNGC 5 cut(s) 334, 780, 923, 1106, 1414
Sau96I GGNCC 6 cut(s) 51, 104, 113, 514, 837, 1091
SchI GAGTC 3 cut(s) 702, 764, 1047
ScrFI CCNGG 8 cut(s) 279, 455, 649, 794, 835, 1014, 1112, 1314
SduI GDGCHC 3 cut(s) 70, 277, 1339
SfaNI GCATC 3 cut(s) 430, 1029, 1484
SfcI CTRYAG 2 cut(s) 920, 1103
SfuI TTCGAA 1 cut(s) 77
SinI GGWCC 5 cut(s) 51, 104, 113, 514, 837
SmiMI CAYNNNNRTG 2 cut(s) 327, 1179
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
Sse9I AATT 7 cut(s) 58, 394, 415, 449, 1165, 1242, 1407
SsiI CCGC 1 cut(s) 19
SspI AATATT 1 cut(s) 1255
SspMI CTAG 2 cut(s) 165, 198
StyD4I CCNGG 8 cut(s) 277, 453, 647, 792, 833, 1012, 1110, 1312
StyI CCWWGG 1 cut(s) 756
TaaI ACNGT 3 cut(s) 100, 316, 1085
TaiI ACGT 6 cut(s) 462, 557, 579, 666, 957, 1491
TaqI TCGA 7 cut(s) 77, 271, 570, 849, 957, 1051, 1427
TaqII GACCGA 1 cut(s) 1467
TasI AATT 7 cut(s) 58, 394, 415, 449, 1165, 1242, 1407
TfiI GAWTC 1 cut(s) 1356
Tru1I TTAA 3 cut(s) 723, 1116, 1485
Tru9I TTAA 3 cut(s) 723, 1116, 1485
TscAI CASTG 4 cut(s) 214, 319, 375, 1267
TseFI GTSAC 2 cut(s) 229, 1396
TseI GCWGC 5 cut(s) 333, 779, 922, 1105, 1413
Tsp45I GTSAC 2 cut(s) 229, 1396
TspDTI ATGAA 7 cut(s) 243, 662, 870, 993, 1159, 1178, 1419
TspGWI ACGGA 3 cut(s) 187, 425, 1170
TspRI CASTG 4 cut(s) 214, 319, 375, 1267
Van91I CCANNNNNTGG 1 cut(s) 142
VpaK11BI GGWCC 5 cut(s) 51, 104, 113, 514, 837
XapI RAATTY 2 cut(s) 1165, 1407
XmnI GAANNNNTTC 2 cut(s) 909, 1301
XspI CTAG 2 cut(s) 165, 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.