pycom07g09200

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
8444537 .. 8445039
503 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 399 bp
ATGTTGCTAACTTGGGTAACACAACCTACTGCTCGATTTTTACTAGATGGCATGCATTACCATGGTGTGCTGAACAAGGCATTTCTATCAGCTTCACAGAGGCTTTTGCAAGTTATAGAGGTTATTTCTAAGTACATGAGTCCATTGGTAGCTTCCTATATTGCTTATGCAAATCAAATCCATGTGGTTCTTGCCTTCTATATTGACAGCATTGGTATAATAACTGATTTTGGCAAGCATTTTGATGGTGATGAGTATGTATCATGGTGCCACTTCAATGCTAAATACAATGTCGACCTCATGGCAGCCTTGTTTATGGCTCATACGACTCATATTCGTTTAATGGAGAGATCATATCTATTTGGGGAAGAGCAATCAGTTTCCTGCTACCGATATTAA

Protein Analysis

133

Amino Acids

15.27

Weight (kDa)

6.35

Isoelectric Point (pI)

54.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024651)

Species Orthologous Gene IDs
pyrus_communis pycom07g03920 pycom07g09150 pycom07g09200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 267
AccI GTMKAC 1 cut(s) 294
AfaI GTAC 1 cut(s) 134
AgsI TTSAA 1 cut(s) 277
AluBI AGCT 2 cut(s) 92, 152
AluI AGCT 2 cut(s) 92, 152
ApeKI GCWGC 1 cut(s) 305
AsuHPI GGTGA 1 cut(s) 260
BanI GGYRCC 1 cut(s) 267
BbvI GCAGC 1 cut(s) 317
BccI CCATC 2 cut(s) 41, 239
BfaI CTAG 1 cut(s) 44
BisI GCNGC 1 cut(s) 306
BlsI GCNGC 1 cut(s) 307
BmiI GGNNCC 1 cut(s) 269
BsaJI CCNNGG 1 cut(s) 61
BseDI CCNNGG 1 cut(s) 61
BseXI GCAGC 1 cut(s) 317
BshNI GGYRCC 1 cut(s) 267
Bsp143I GATC 1 cut(s) 350
Bsp19I CCATGG 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 269
BspQI GCTCTTC 1 cut(s) 363
BspT107I GGYRCC 1 cut(s) 267
BssECI CCNNGG 1 cut(s) 61
BssMI GATC 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 61
Bst6I CTCTTC 1 cut(s) 363
BstC8I GCNNGC 2 cut(s) 53, 236
BstDEI CTNAG 1 cut(s) 129
BstDSI CCRYGG 1 cut(s) 61
BstKTI GATC 1 cut(s) 353
BstMBI GATC 1 cut(s) 350
BstNSI RCATGY 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 317
BtgI CCRYGG 1 cut(s) 61
Cac8I GCNNGC 2 cut(s) 53, 236
Csp6I GTAC 1 cut(s) 133
CviAII CATG 6 cut(s) 52, 62, 136, 182, 264, 301
CviJI RGCY 5 cut(s) 92, 103, 152, 308, 320
CviKI_1 RGCY 5 cut(s) 92, 103, 152, 308, 320
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 1 cut(s) 129
DpnI GATC 1 cut(s) 352
DpnII GATC 1 cut(s) 350
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
Eco130I CCWWGG 1 cut(s) 61
EcoT14I CCWWGG 1 cut(s) 61
EcoT22I ATGCAT 1 cut(s) 57
ErhI CCWWGG 1 cut(s) 61
FaeI CATG 6 cut(s) 55, 65, 139, 185, 267, 304
FatI CATG 6 cut(s) 51, 61, 135, 181, 263, 300
FblI GTMKAC 1 cut(s) 294
Fnu4HI GCNGC 1 cut(s) 306
Fsp4HI GCNGC 1 cut(s) 306
FspBI CTAG 1 cut(s) 44
GluI GCNGC 1 cut(s) 306
Hin1II CATG 6 cut(s) 55, 65, 139, 185, 267, 304
HincII GTYRAC 1 cut(s) 295
HindII GTYRAC 1 cut(s) 295
HinfI GANTC 2 cut(s) 139, 328
HphI GGTGA 1 cut(s) 260
Hpy166II GTNNAC 1 cut(s) 295
Hpy8I GTNNAC 1 cut(s) 295
HpyAV CCTTC 1 cut(s) 205
HpyCH4V TGCA 3 cut(s) 55, 109, 170
HpyF3I CTNAG 1 cut(s) 129
Hsp92II CATG 6 cut(s) 55, 65, 139, 185, 267, 304
Kzo9I GATC 1 cut(s) 350
LguI GCTCTTC 1 cut(s) 363
Lsp1109I GCAGC 1 cut(s) 317
MaeI CTAG 1 cut(s) 44
MaeIII GTNAC 1 cut(s) 16
MalI GATC 1 cut(s) 352
MboI GATC 1 cut(s) 350
MboII GAAGA 1 cut(s) 380
MlyI GAGTC 2 cut(s) 148, 322
MnlI CCTC 3 cut(s) 93, 112, 308
Mph1103I ATGCAT 1 cut(s) 57
MseI TTAA 2 cut(s) 341, 397
MslI CAYNNNNRTG 3 cut(s) 60, 243, 276
NcoI CCATGG 1 cut(s) 61
NdeII GATC 1 cut(s) 350
NlaIII CATG 6 cut(s) 55, 65, 139, 185, 267, 304
NlaIV GGNNCC 1 cut(s) 269
NsiI ATGCAT 1 cut(s) 57
NspI RCATGY 1 cut(s) 55
PaeI GCATGC 1 cut(s) 55
PciSI GCTCTTC 1 cut(s) 363
PkrI GCNGC 1 cut(s) 307
PleI GAGTC 2 cut(s) 147, 322
PpsI GAGTC 2 cut(s) 147, 322
PspN4I GGNNCC 1 cut(s) 269
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
RseI CAYNNNNRTG 3 cut(s) 60, 243, 276
SalI GTCGAC 1 cut(s) 293
SapI GCTCTTC 1 cut(s) 363
SaqAI TTAA 2 cut(s) 341, 397
SatI GCNGC 1 cut(s) 306
Sau3AI GATC 1 cut(s) 350
SchI GAGTC 2 cut(s) 148, 322
SetI ASST 5 cut(s) 28, 94, 123, 154, 300
SmiMI CAYNNNNRTG 3 cut(s) 60, 243, 276
SphI GCATGC 1 cut(s) 55
SspMI CTAG 1 cut(s) 44
StyI CCWWGG 1 cut(s) 61
TaqI TCGA 2 cut(s) 34, 294
TatI WGTACW 1 cut(s) 132
Tru1I TTAA 2 cut(s) 341, 397
Tru9I TTAA 2 cut(s) 341, 397
TseI GCWGC 1 cut(s) 305
XceI RCATGY 1 cut(s) 55
XmiI GTMKAC 1 cut(s) 294
XspI CTAG 1 cut(s) 44
Zsp2I ATGCAT 1 cut(s) 57
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.