pycom07g14240

Belongs to the glucose-6-phosphate 1-epimerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
16194635 .. 16196058
1424 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g14240.3

Sequence Viewer

Length: 459 bp
ATGGGGCATTCAGCAGCAGAATGGGAACATAGGGCAGCCATTGAGATTACAAAAGATAGGAATGGGGTAGAACAGGTGGTGCTTCAGAACCAACAAGGGGCTTCAGCACGGGTTAGCTTACATGGAGGACATGTCACTTCGTGGAGGAATAAGCACGGCGAAGAACTCCTGTTCACTAGTAGCAAGACAATCTCCAAGCCCCCAAAAGCGATGCGAGGAGGAATTGTCATTTGTTTCCCACAGTTTGGGAACTGTGGATTGCTAGAACAACATGGTTTTGCGAGGAACAAGTTGTGGGCAATTGATGATAATCCTGAAATGCGTCAACCACACGATTCCAATGGAAAATCCTTCATTGATCTACTACTTAAACCGTCTGAAAATGACCTGAGGTGTTGGCCACATAGTTTTGAGTTTCGACTTAGGGTGTCTCTTGCAACAAATGGAGATCATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

153

Amino Acids

17.09

Weight (kDa)

7.84

Isoelectric Point (pI)

29.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029324)

Species Orthologous Gene IDs
pyrus_communis pycom07g14240
rosa_samantha Rh1BG244900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 245
AcoI YGGCCR 1 cut(s) 398
AcuI CTGAAG 2 cut(s) 68, 87
AdeI CACNNNGTG 1 cut(s) 141
AfiI CCNNNNNNNGG 2 cut(s) 97, 245
AflIII ACRYGT 1 cut(s) 130
AhlI ACTAGT 1 cut(s) 176
AluBI AGCT 1 cut(s) 117
AluI AGCT 1 cut(s) 117
Alw26I GTCTC 1 cut(s) 435
AoxI GGCC 1 cut(s) 398
ApeKI GCWGC 2 cut(s) 14, 35
AxyI CCTNAGG 1 cut(s) 389
BalI TGGCCA 1 cut(s) 400
BbvI GCAGC 2 cut(s) 26, 47
BceAI ACGGC 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 435
BcuI ACTAGT 1 cut(s) 176
BfaI CTAG 2 cut(s) 177, 263
BisI GCNGC 2 cut(s) 15, 36
BlsI GCNGC 2 cut(s) 16, 37
BmsI GCATC 1 cut(s) 201
BsaBI GATNNNNATC 1 cut(s) 309
BsaXI ACNNNNNCTCC 4 cut(s) 117, 147, 210, 240
Bsc4I CCNNNNNNNGG 2 cut(s) 97, 245
Bse21I CCTNAGG 1 cut(s) 389
Bse8I GATNNNNATC 1 cut(s) 309
BseJI GATNNNNATC 1 cut(s) 309
BseLI CCNNNNNNNGG 2 cut(s) 97, 245
BseMII CTCAG 1 cut(s) 380
BseRI GAGGAG 1 cut(s) 231
BseXI GCAGC 2 cut(s) 26, 47
BshFI GGCC 1 cut(s) 400
BslI CCNNNNNNNGG 2 cut(s) 97, 245
BsmAI GTCTC 1 cut(s) 435
BsmI GAATGC 1 cut(s) 7
BsnI GGCC 1 cut(s) 400
Bsp143I GATC 2 cut(s) 358, 448
BspANI GGCC 1 cut(s) 400
BspCNI CTCAG 1 cut(s) 381
BssMI GATC 2 cut(s) 358, 448
Bst4CI ACNGT 3 cut(s) 243, 254, 375
BstDEI CTNAG 2 cut(s) 389, 422
BstKTI GATC 2 cut(s) 361, 451
BstMAI GTCTC 1 cut(s) 435
BstMBI GATC 2 cut(s) 358, 448
BstNSI RCATGY 1 cut(s) 134
BstV1I GCAGC 2 cut(s) 26, 47
Bsu36I CCTNAGG 1 cut(s) 389
BsuRI GGCC 1 cut(s) 400
BtgZI GCGATG 1 cut(s) 224
CseI GACGC 1 cut(s) 311
CviAII CATG 3 cut(s) 122, 131, 272
CviJI RGCY 5 cut(s) 38, 101, 117, 199, 400
CviKI_1 RGCY 5 cut(s) 38, 101, 117, 199, 400
DdeI CTNAG 2 cut(s) 389, 422
DpnI GATC 2 cut(s) 360, 450
DpnII GATC 2 cut(s) 358, 448
DraIII CACNNNGTG 1 cut(s) 141
EaeI YGGCCR 1 cut(s) 398
Eco57I CTGAAG 2 cut(s) 68, 87
Eco81I CCTNAGG 1 cut(s) 389
FaeI CATG 3 cut(s) 125, 134, 275
FaiI YATR 5 cut(s) 30, 123, 132, 273, 405
FatI CATG 3 cut(s) 121, 130, 271
Fnu4HI GCNGC 2 cut(s) 15, 36
Fsp4HI GCNGC 2 cut(s) 15, 36
FspBI CTAG 2 cut(s) 177, 263
GluI GCNGC 2 cut(s) 15, 36
HaeIII GGCC 1 cut(s) 400
HgaI GACGC 1 cut(s) 311
Hin1II CATG 3 cut(s) 125, 134, 275
HincII GTYRAC 1 cut(s) 326
HindII GTYRAC 1 cut(s) 326
HinfI GANTC 1 cut(s) 335
Hpy166II GTNNAC 2 cut(s) 174, 326
Hpy188I TCNGA 2 cut(s) 87, 379
Hpy188III TCNNGA 1 cut(s) 314
Hpy8I GTNNAC 2 cut(s) 174, 326
HpyAV CCTTC 1 cut(s) 361
HpyCH4III ACNGT 3 cut(s) 243, 254, 375
HpyCH4V TGCA 1 cut(s) 437
HpyF3I CTNAG 2 cut(s) 389, 422
Hsp92II CATG 3 cut(s) 125, 134, 275
Kzo9I GATC 2 cut(s) 358, 448
LpnPI CCDG 4 cut(s) 59, 182, 327, 401
Lsp1109I GCAGC 2 cut(s) 26, 47
LweI GCATC 1 cut(s) 201
MaeI CTAG 2 cut(s) 177, 263
MaeIII GTNAC 1 cut(s) 133
MalI GATC 2 cut(s) 360, 450
MboI GATC 2 cut(s) 358, 448
MboII GAAGA 1 cut(s) 173
MfeI CAATTG 1 cut(s) 300
MlsI TGGCCA 1 cut(s) 400
MluCI AATT 2 cut(s) 222, 300
MluNI TGGCCA 1 cut(s) 400
MnlI CCTC 6 cut(s) 119, 138, 209, 212, 276, 384
Mox20I TGGCCA 1 cut(s) 400
MscI TGGCCA 1 cut(s) 400
MseI TTAA 1 cut(s) 369
Msp20I TGGCCA 1 cut(s) 400
MunI CAATTG 1 cut(s) 300
Mva1269I GAATGC 1 cut(s) 7
NdeII GATC 2 cut(s) 358, 448
NlaIII CATG 3 cut(s) 125, 134, 275
NmuCI GTSAC 1 cut(s) 133
NspI RCATGY 1 cut(s) 134
PciI ACATGT 1 cut(s) 130
PctI GAATGC 1 cut(s) 7
PfeI GAWTC 1 cut(s) 335
PflMI CCANNNNNTGG 1 cut(s) 245
PkrI GCNGC 2 cut(s) 16, 37
PscI ACATGT 1 cut(s) 130
SaqAI TTAA 1 cut(s) 369
SatI GCNGC 2 cut(s) 15, 36
Sau3AI GATC 2 cut(s) 358, 448
SetI ASST 4 cut(s) 78, 119, 390, 395
SfaNI GCATC 1 cut(s) 201
SpeI ACTAGT 1 cut(s) 176
Sse9I AATT 2 cut(s) 222, 300
SspMI CTAG 2 cut(s) 177, 263
TaaI ACNGT 3 cut(s) 243, 254, 375
TaqI TCGA 1 cut(s) 418
TasI AATT 2 cut(s) 222, 300
TfiI GAWTC 1 cut(s) 335
Tru1I TTAA 1 cut(s) 369
Tru9I TTAA 1 cut(s) 369
TseFI GTSAC 1 cut(s) 133
TseI GCWGC 2 cut(s) 14, 35
Tsp45I GTSAC 1 cut(s) 133
TspDTI ATGAA 1 cut(s) 343
Van91I CCANNNNNTGG 1 cut(s) 245
XceI RCATGY 1 cut(s) 134
XspI CTAG 2 cut(s) 177, 263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.